vOTU vOTU-084389

vOTU: vOTU-084389

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-084389
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01303 → vGENUS-03921 → vSUBGEN-25273 → vOTU-084389
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1501954
Biosample ID	SAMEA3136632
Genome length (bp)	35,182 bps
CheckV completeness	91.17% (High-quality)
CDS count	45
CDS density	91.35%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	74	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → KLE1615 → KLE1615 sp900066985	Total connections	41	Host agreement	95.12

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 91.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1501954_1	phrog_1794	68.7	1.1e-19	amidase	lysis
UniRef90	UHGV-1501954_1	UniRef90_A0A416MN83	442.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1501954_1	1408437.JNJN01000039_gene391	109.0	9.09e-25	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1501954_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1501954_1	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-1501954_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1501954_1	PF01520,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_2	phrog_199	66.3	3.8e-19	holin	lysis
UniRef90	UHGV-1501954_2	UniRef90_A0A3D3UA08	271.0	0	Holin	N/A
eggNOG-mapper	UHGV-1501954_2	742723.HMPREF9477_00889	216.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1501954_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1501954_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1501954_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1501954_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_3	phrog_37959	44.7	0.0000000000021	N/A	unknown function
eggNOG-mapper	UHGV-1501954_3	398512.JQKC01000015_gene4714	57.0	0.000000000776	N/A	N/A
PHROG	UHGV-1501954_4	phrog_16164	96.1	1.4e-29	N/A	unknown function
PHROG	UHGV-1501954_5	phrog_3558	338.4	0	tail protein	tail
UniRef90	UHGV-1501954_5	UniRef90_A0A3D3U8S7	515.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1501954_5	411465.PEPMIC_00746	246.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1501954_5	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-1501954_5	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-1501954_5	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1501954_5	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1501954_5	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-1501954_6	UniRef90_A0A416L6F4	103.0	1.61e-23	MtfA protein	N/A
eggNOG-mapper	UHGV-1501954_6	1235799.C818_04232	104.0	7.77e-25	phage tail	N/A
COG	UHGV-1501954_6	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1501954_6	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_7	phrog_1533	290.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1501954_7	UniRef90_A0A356CYG0	230.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1501954_7	411483.FAEPRAA2165_01911	376.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1501954_7	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1501954_7	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1501954_7	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1501954_7	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_8	phrog_706	158.4	0	N/A	unknown function
UniRef90	UHGV-1501954_8	UniRef90_A0A1M6B1I0	156.0	1.12104e-44	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1501954_8	411461.DORFOR_01174	132.0	3.44e-36	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1501954_8	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1501954_8	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_10	phrog_820	76.6	2.6e-22	major tail protein	tail
UniRef90	UHGV-1501954_10	UniRef90_A0A174M1L1	232.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1501954_10	411461.DORFOR_01172	219.0	0	N/A	N/A
structural_annotation	UHGV-1501954_10	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_11	phrog_3266	88.8	4.9e-26	tail completion	connector
eggNOG-mapper	UHGV-1501954_11	663278.Ethha_0098	70.5	0.000000000000193	N/A	N/A
structural_annotation	UHGV-1501954_11	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_12	phrog_556	61.1	1.4e-17	minor head protein	head and packaging
UniRef90	UHGV-1501954_12	UniRef90_UPI001C3B04D8	137.0	5.3e-39	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1501954_12	411461.DORFOR_01170	110.0	7.31e-29	Minor capsid protein	N/A
Pfam	UHGV-1501954_12	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1501954_12	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_13	phrog_3366	65.5	7.4e-19	N/A	unknown function
structural_annotation	UHGV-1501954_13	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_14	phrog_541	83.3	2.5e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-1501954_14	411902.CLOBOL_00133	72.4	0.0000000000000144	N/A	N/A
PHROG	UHGV-1501954_15	phrog_10	178.2	0	major head protein	head and packaging
UniRef90	UHGV-1501954_15	UniRef90_A0A3D3U8R7	766.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1501954_15	411902.CLOBOL_00134	545.0	0	Phage capsid family	N/A
Pfam	UHGV-1501954_15	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1501954_15	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1501954_15	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1501954_15	PF05065,PF13620,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_16	phrog_194	93.6	2.4e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-1501954_16	UniRef90_A0A1C5P0Y8	261.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1501954_16	411902.CLOBOL_00135	145.0	7.34981e-42	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1501954_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1501954_16	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_18	phrog_918	86.6	1.6e-25	N/A	unknown function
UniRef90	UHGV-1501954_18	UniRef90_UPI001D092FF5	138.0	5.60996e-41	N/A	N/A
eggNOG-mapper	UHGV-1501954_18	1256908.HMPREF0373_00480	136.0	7.72998e-41	N/A	N/A
Pfam	UHGV-1501954_18	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1501954_18	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_19	phrog_15041	113.6	5.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-1501954_19	1304866.K413DRAFT_0808	48.1	0.00000254	N/A	N/A
structural_annotation	UHGV-1501954_19	PF10827	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_20	phrog_581	305.8	0	minor head protein	head and packaging
UniRef90	UHGV-1501954_20	UniRef90_A0A3D3U8R6	971.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1501954_20	1235799.C818_04219	369.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1501954_20	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1501954_20	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1501954_20	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_21	phrog_533	382.4	0	portal protein	head and packaging
UniRef90	UHGV-1501954_21	UniRef90_A0A3D3U9V8	902.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1501954_21	411902.CLOBOL_00138	510.0	0	N/A	N/A
Pfam	UHGV-1501954_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1501954_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1501954_22	K06909	68.5	7.6e-20	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1501954_22	phrog_2	82.0	1.1e-23	terminase large subunit	head and packaging
UniRef90	UHGV-1501954_22	UniRef90_A0A3D3U8V8	920.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1501954_22	411902.CLOBOL_00139	763.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1501954_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1501954_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1501954_22	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_23	phrog_509	278.2	0	terminase small subunit	head and packaging
UniRef90	UHGV-1501954_23	UniRef90_A0A3D3U9Y4	400.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1501954_23	1449050.JNLE01000003_gene3896	262.0	0	DNA packaging	N/A
Pfam	UHGV-1501954_23	PF10668	N/A	N/A	Phage terminase small subunit	Phage_terminase
NCBIFam	UHGV-1501954_23	NF040601.1	N/A	N/A	phage terminase small subunit	N/A
COG	UHGV-1501954_23	COG5484	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1501954_23	PF10668,PF01920,NF040601,COG5484	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_24	phrog_36	66.0	6.1e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-1501954_24	UniRef90_A0A416MN03	253.0	0	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1501954_24	1256908.HMPREF0373_00671	132.0	1.2e-37	N/A	N/A
Pfam	UHGV-1501954_24	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-1501954_24	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1501954_26	UniRef90_A0A1C5TF07	117.0	6.68e-31	N/A	N/A
eggNOG-mapper	UHGV-1501954_26	742733.HMPREF9469_00921	88.6	5.48e-20	N/A	N/A
Pfam	UHGV-1501954_26	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1501954_26	NF041588	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1501954_28	1235792.C808_00065	64.7	0.000000000117	N/A	N/A
PHROG	UHGV-1501954_31	phrog_8841	597.0	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501954_31	UniRef90_UPI001D0E7B86	798.0	0	N/A	N/A
eggNOG-mapper	UHGV-1501954_31	476272.RUMHYD_01742	789.0	0	N/A	N/A
Pfam	UHGV-1501954_31	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-1501954_31	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-1501954_31	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1501954_31	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-1501954_32	K02316	73.6	2.9e-21	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-1501954_32	phrog_11992	177.6	0	N/A	unknown function
UniRef90	UHGV-1501954_32	UniRef90_A0A3D3U8V0	341.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1501954_32	411460.RUMTOR_02069	182.0	0	CHC2 zinc finger	N/A
PADLOC	UHGV-1501954_32	drt-UG29	53.7	0.0000000000000021	DRT	DRT
Pfam	UHGV-1501954_32	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-1501954_32	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-1501954_32	PF01807	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_33	phrog_3490	127.4	7.8e-38	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501954_33	UniRef90_A0A3D3U9X5	307.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-1501954_33	861454.HMPREF9099_00350	120.0	1.82e-32	ERCC4 domain	N/A
Pfam	UHGV-1501954_33	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-1501954_33	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-1501954_34	K03111	90.3	3.4e-26	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1501954_34	phrog_44	103.4	2.6e-30	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501954_34	UniRef90_A0A3D3U8Y9	283.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1501954_34	887325.HMPREF0381_0372	88.2	2.07e-20	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1501954_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1501954_34	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1501954_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1501954_34	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1501954_34	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_35	phrog_21613	95.8	3.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-1501954_35	1120998.AUFC01000030_gene2214	175.0	0	N/A	N/A
KOfam	UHGV-1501954_36	K10906	83.0	2.1e-34	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-1501954_36	phrog_412	260.6	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1501954_36	UniRef90_A0A3D3U8P6	546.0	0	N/A	N/A
eggNOG-mapper	UHGV-1501954_36	1122201.AUAZ01000055_gene153	140.0	2.62e-37	N/A	N/A
Pfam	UHGV-1501954_36	PF12684	N/A	N/A	N/A	DUF3799
structural_annotation	UHGV-1501954_36	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_38	phrog_4292	46.3	0.00000000000044	N/A	unknown function
Pfam	UHGV-1501954_40	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
UniRef90	UHGV-1501954_41	UniRef90_A0A6N9LK73	120.0	1.77e-34	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1501954_41	887325.HMPREF0381_0113	94.7	6.83e-25	N/A	N/A
Pfam	UHGV-1501954_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1501954_41	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1501954_42	K22300	66.3	5.9e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1501954_42	phrog_8	69.3	7.9e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1501954_42	UniRef90_UPI000CF907E9	150.0	2.31214e-43	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1501954_42	1262449.CP6013_3167	109.0	2.59e-28	Helix-turn-helix domain protein	N/A
Pfam	UHGV-1501954_42	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1501954_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1501954_42	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_43	phrog_87	76.2	2.9e-22	metallo-protease	other
UniRef90	UHGV-1501954_43	UniRef90_A0A564SD80	172.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1501954_43	457412.RSAG_00798	174.0	0	Zn peptidase	N/A
COG	UHGV-1501954_43	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1501954_43	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1501954_44	phrog_9605	413.2	0	N/A	unknown function
UniRef90	UHGV-1501954_44	UniRef90_UPI0011DDF8A9	564.0	0	N/A	N/A
eggNOG-mapper	UHGV-1501954_44	1410628.JNKS01000004_gene2023	382.0	0	N/A	N/A
Pfam	UHGV-1501954_44	PF12358	N/A	N/A	N/A	DUF3644
Pfam	UHGV-1501954_44	PF18740	N/A	N/A	EC042_2821-like Restriction Endonuclease-like domain	EC042_2821
structural_annotation	UHGV-1501954_44	PF12358,COG1895	N/A	N/A	N/A	N/A
KOfam	UHGV-1501954_45	K14059	136.3	3.5e-40	int; integrase	N/A
PHROG	UHGV-1501954_45	phrog_1	145.4	4.59626e-43	integrase	integration and excision
UniRef90	UHGV-1501954_45	UniRef90_A0A1I0JMR0	417.0	0	Integrase	N/A
eggNOG-mapper	UHGV-1501954_45	1304866.K413DRAFT_1180	312.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1501954_45	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1501954_45	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1501954_45	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1501954	Yes	35,182	44	91	1
UHGV-1587690	No	11,821	44	32	1