vOTU vOTU-084753

vOTU: vOTU-084753

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-084753
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → CAG-628 → CAG-628 sp000438415
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00604 → vOTU-084753
Host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0009649
Biosample ID	N/A
Genome length (bp)	36,875 bps
CheckV completeness	62.11% (Medium-quality)
CDS count	68
CDS density	91.91%
tRNA count	12
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660	Total connections	31	Host agreement	96.77
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → CAG-628 → CAG-628 sp000438415	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.11)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0009649_1	K14059	203.7	0	int; integrase	N/A
PHROG	UHGV-0009649_1	phrog_1	189.8	0	integrase	integration and excision
UniRef90	UHGV-0009649_1	UniRef90_A0A843GV89	376.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0009649_1	1118063.I7I4C5_9CAUD	187.0	0	Phage integrase family	N/A
Pfam	UHGV-0009649_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0009649_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
structural_annotation	UHGV-0009649_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0009649_2	445971.ANASTE_00286	92.8	3.86e-22	N/A	N/A
UniRef90	UHGV-0009649_3	UniRef90_R5AAT8	165.0	0	Peptidase_M78 domain-containing protein	N/A
Pfam	UHGV-0009649_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-0009649_3	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_4	phrog_2967	54.2	0.0000000000000026	transcriptional regulator	transcription regulation
UniRef90	UHGV-0009649_4	UniRef90_UPI00191E9864	60.8	0.00000000321	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0009649_4	458233.MCCL_1543	60.1	0.00000000334	Peptidase S24-like	N/A
Pfam	UHGV-0009649_4	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0009649_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
PHROG	UHGV-0009649_5	phrog_2967	58.7	1.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0009649_5	UniRef90_G9YK13	119.0	4.75e-32	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0009649_5	861450.HMPREF0080_02022	119.0	7.97e-33	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0009649_5	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0009649_5	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0009649_5	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009649_6	UniRef90_A0A3B8SUZ2	87.0	7.88e-21	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0009649_6	345219.Bcoa_1943	49.7	0.0000024	Transcriptional	N/A
Pfam	UHGV-0009649_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0009649_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0009649_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009649_9	PF11372	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_11	phrog_9327	46.0	0.00000000000064	primosomal protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009649_11	UniRef90_R5A158	132.0	1.76e-34	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0009649_11	927704.SELR_18440	68.9	0.0000000000457	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
COG	UHGV-0009649_11	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0009649_11	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_15	phrog_6244	96.2	3.7e-28	N/A	unknown function
UniRef90	UHGV-0009649_15	UniRef90_A0A7W3SYY9	60.8	0.00000000065	Putative phage-related endonuclease	N/A
eggNOG-mapper	UHGV-0009649_15	508419.F8J183_9CAUD	96.3	1.46e-24	N/A	N/A
structural_annotation	UHGV-0009649_15	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_16	phrog_298	60.9	6.9e-18	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009649_16	UniRef90_A0A843HPP6	160.0	0	PD-(D/E)XK nuclease family protein	N/A
eggNOG-mapper	UHGV-0009649_16	1399942.U3PDT7_9CAUD	240.0	0	nuclease activity	N/A
structural_annotation	UHGV-0009649_16	PF12705,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_17	phrog_72	64.8	1.5e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0009649_17	1304866.K413DRAFT_1197	58.2	0.0000000211	N/A	N/A
structural_annotation	UHGV-0009649_17	PF05772	N/A	N/A	N/A	N/A
KOfam	UHGV-0009649_19	K03111	105.3	9.6e-31	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0009649_19	phrog_44	113.1	2.6e-33	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0009649_19	UniRef90_A0A350H2L8	179.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0009649_19	1121936.AUHI01000014_gene22	120.0	1.79e-32	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0009649_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0009649_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0009649_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0009649_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0009649_19	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0009649_23	K00571	107.5	1.6e-31	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0009649_23	phrog_67	106.8	2.4e-32	DNA methyltransferase	other
UniRef90	UHGV-0009649_23	UniRef90_A0A0E1KQR8	385.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0009649_23	910314.HMPREF9220_0636	367.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0009649_23	MTase_II_00157	92.0	1.2e-27	Type II methyltransferase	RM
Pfam	UHGV-0009649_23	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0009649_23	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0009649_23	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009649_24	PF09871,TIGR00739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009649_35	PF10654	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009649_37	PF15456	N/A	N/A	N/A	N/A
KOfam	UHGV-0009649_39	K07474	115.0	1.2e-33	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0009649_39	phrog_51	128.5	4.3e-38	terminase small subunit	head and packaging
UniRef90	UHGV-0009649_39	UniRef90_A0A350H3S5	209.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0009649_39	536232.CLM_2664	107.0	1.3e-26	Terminase small subunit	N/A
Pfam	UHGV-0009649_39	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0009649_39	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0009649_39	PF03592,COG3728	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009649_40	UniRef90_R5A0K2	954.0	0	Putative phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0009649_40	645991.Sgly_0335	481.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0009649_40	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0009649_40	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_41	phrog_533	243.5	0	portal protein	head and packaging
UniRef90	UHGV-0009649_41	UniRef90_R5A3Z5	939.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0009649_41	1117108.PAALTS15_13582	433.0	0	N/A	N/A
structural_annotation	UHGV-0009649_41	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_43	phrog_581	123.7	0	minor head protein	head and packaging
UniRef90	UHGV-0009649_43	UniRef90_R5A5Z0	825.0	0	Putative phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0009649_43	1151292.QEW_4396	270.0	0	COG3209 Rhs family protein	N/A
Pfam	UHGV-0009649_43	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0009649_43	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009649_43	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_46	phrog_2303	77.9	1.6e-22	head scaffolding protein	head and packaging
structural_annotation	UHGV-0009649_46	MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_47	phrog_422	231.6	0	major head protein	head and packaging
UniRef90	UHGV-0009649_47	UniRef90_W0U896	384.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0009649_47	1160721.RBI_II00538	384.0	0	N/A	N/A
structural_annotation	UHGV-0009649_47	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_50	phrog_541	90.5	1.4e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0009649_50	1151292.QEW_2431	92.4	1.79e-22	N/A	N/A
PHROG	UHGV-0009649_51	phrog_8710	128.7	1.8e-38	N/A	unknown function
eggNOG-mapper	UHGV-0009649_51	1304866.K413DRAFT_0782	85.5	4.8e-20	N/A	N/A
structural_annotation	UHGV-0009649_51	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_52	phrog_556	69.1	5.8e-20	minor head protein	head and packaging
UniRef90	UHGV-0009649_52	UniRef90_UPI00058FDD53	117.0	2.28e-31	minor capsid protein	N/A
eggNOG-mapper	UHGV-0009649_52	742740.HMPREF9474_03509	107.0	1.62e-28	N/A	N/A
PHROG	UHGV-0009649_53	phrog_2595	59.8	4.5e-17	head-tail connector protein	connector
UniRef90	UHGV-0009649_53	UniRef90_UPI0016BCEC89	92.4	1.41e-21	minor capsid protein	N/A
eggNOG-mapper	UHGV-0009649_53	1151292.QEW_2427	96.3	7.31e-24	N/A	N/A
Pfam	UHGV-0009649_53	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0009649_53	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_54	phrog_820	83.2	2.7e-24	major tail protein	tail
eggNOG-mapper	UHGV-0009649_54	1282664.H354_06691	111.0	2.13e-29	N/A	N/A
structural_annotation	UHGV-0009649_54	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_55	phrog_8300	75.6	5.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-0009649_55	1507.HMPREF0262_01185	55.5	0.0000000183	N/A	N/A
structural_annotation	UHGV-0009649_55	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_56	phrog_8355	73.9	1.2e-21	N/A	unknown function
UniRef90	UHGV-0009649_56	UniRef90_UPI001D0684E3	65.1	0.0000000000138	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0009649_56	1123263.AUKY01000051_gene1072	65.1	0.00000000000205	N/A	N/A
Pfam	UHGV-0009649_56	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
PHROG	UHGV-0009649_57	phrog_1535	109.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0009649_57	UniRef90_R5A122	568.0	0	ETS domain-containing protein	N/A
eggNOG-mapper	UHGV-0009649_57	645991.Sgly_0352	262.0	0	SLT domain	N/A
COG	UHGV-0009649_57	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0009649_57	PF06791,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_58	phrog_1194	42.0	0.000000000014	N/A	unknown function
structural_annotation	UHGV-0009649_58	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_59	phrog_6616	66.3	2.9e-19	tail protein	tail
eggNOG-mapper	UHGV-0009649_59	469596.HMPREF9488_01330	87.8	0.00000000000000333	N/A	N/A
structural_annotation	UHGV-0009649_59	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_60	phrog_372	171.9	0	tail protein	tail
UniRef90	UHGV-0009649_60	UniRef90_A0A2U8UIA2	81.6	0.000000000000966	Minor tail protein	N/A
eggNOG-mapper	UHGV-0009649_60	888049.HMPREF8578_0253	65.5	0.0000000214	N/A	N/A
Pfam	UHGV-0009649_60	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0009649_60	PF05895,MF_04116,NF010681,COG3291,COG2967	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_62	phrog_13632	47.2	0.0000000000005	N/A	unknown function
eggNOG-mapper	UHGV-0009649_62	1399942.U3PIX4_9CAUD	51.2	0.00000134	N/A	N/A
structural_annotation	UHGV-0009649_63	PF06946	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009649_65	UniRef90_A0A3B9T5N2	169.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0009649_65	883109.HMPREF0380_00270	96.7	4.12e-20	pathogenesis	N/A
Pfam	UHGV-0009649_65	PF05257	N/A	N/A	CHAP domain	CHAP
COG	UHGV-0009649_65	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
structural_annotation	UHGV-0009649_65	PF02427,COG3942,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_67	phrog_11747	287.4	0	N/A	unknown function
UniRef90	UHGV-0009649_67	UniRef90_A0A177NI04	330.0	0	Serine protease	N/A
eggNOG-mapper	UHGV-0009649_67	404380.Gbem_3471	310.0	0	Serine dehydrogenase proteinase	N/A
Pfam	UHGV-0009649_67	PF01972	N/A	N/A	Serine dehydrogenase proteinase	SDH_sah
COG	UHGV-0009649_67	COG0616	N/A	N/A	Periplasmic serine protease, ClpP class	N/A
structural_annotation	UHGV-0009649_67	PF01972,MF_00444,TIGR00706,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0009649_68	phrog_7566	49.2	0.000000000000018	N/A	unknown function
UniRef90	UHGV-0009649_68	UniRef90_UPI000E542A38	72.0	0.000000000000103	phosphoenolpyruvate carboxykinase	N/A
Pfam	UHGV-0009649_68	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0009649	Yes	36,875	29	62	1
UHGV-1545059	No	34,101	28	91	1
UHGV-1422736	No	22,995	29	61	1
UHGV-0187749	No	22,982	29	61	1