vOTU vOTU-085169

vOTU: vOTU-085169

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-085169
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815
Taxonomy (UHGV)	vFAM-00035 → vSUBFAM-02169 → vGENUS-15112 → vSUBGEN-26061 → vOTU-085169
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2122728
Biosample ID	N/A
Genome length (bp)	31,197 bps
CheckV completeness	99.90% (High-quality)
CDS count	44
CDS density	94.31%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815	Total connections	76	Host agreement	72.37
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2122728_1	K14059	272.1	0	int; integrase	N/A
PHROG	UHGV-2122728_1	phrog_1	196.6	0	integrase	integration and excision
UniRef90	UHGV-2122728_1	UniRef90_UPI00095121BF	627.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-2122728_1	1291050.JAGE01000002_gene3375	599.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2122728_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-2122728_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2122728_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2122728_1	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_2	phrog_11900	126.1	2.2e-37	N/A	unknown function
UniRef90	UHGV-2122728_2	UniRef90_UPI001C0FFD3A	405.0	0	Fic family protein	N/A
eggNOG-mapper	UHGV-2122728_2	931626.Awo_c11400	270.0	0	Fic/DOC family	N/A
Pfam	UHGV-2122728_2	PF02661	N/A	N/A	Fic/DOC family	Fic
COG	UHGV-2122728_2	COG3177	N/A	N/A	Fic family protein	N/A
structural_annotation	UHGV-2122728_2	PF02661,NF041381,COG3177	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2122728_3	1408436.JHXY01000019_gene1389	67.4	0.000000000977	N/A	N/A
PHROG	UHGV-2122728_4	phrog_1914	116.8	1.9e-34	N/A	unknown function
UniRef90	UHGV-2122728_4	UniRef90_UPI00195D1542	277.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-2122728_4	1160721.RBI_I01604	114.0	3.28e-29	N/A	N/A
Pfam	UHGV-2122728_4	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-2122728_4	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-2122728_4	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-2122728_5	K18830	65.1	1.1e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-2122728_5	phrog_8	54.5	0.0000000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-2122728_5	UniRef90_A0A3A9EYK4	108.0	2.47e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2122728_5	525254.HMPREF0072_0267	94.4	1.19e-22	DNA-binding helix-turn-helix protein	N/A
PADLOC	UHGV-2122728_5	retron_type_VI_hth_cluster2_1	40.7	0.000000000043	N/A	Retron
Pfam	UHGV-2122728_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2122728_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-2122728_7	UniRef90_UPI001C03922B	69.7	0.0000000000000346	excisionase family DNA-binding protein	N/A
eggNOG-mapper	UHGV-2122728_7	1291050.JAGE01000002_gene3380	63.2	0.00000000000309	N/A	N/A
structural_annotation	UHGV-2122728_7	PF12728,TIGR01764	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2122728_9	PF19607	N/A	N/A	N/A	N/A
KOfam	UHGV-2122728_11	K19171	84.2	7.2e-25	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-2122728_11	phrog_77	216.8	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2122728_11	UniRef90_UPI001959E3D8	435.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-2122728_11	1382358.JHVN01000024_gene1691	301.0	0	N/A	N/A
Pfam	UHGV-2122728_11	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-2122728_11	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-2122728_11	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_12	phrog_862	83.5	3.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-2122728_12	1203606.HMPREF1526_00310	147.0	1.01006e-41	N/A	N/A
structural_annotation	UHGV-2122728_12	PF05037,COG2965	N/A	N/A	N/A	N/A
KOfam	UHGV-2122728_13	K06167	42.8	0.0000000000061	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-2122728_13	phrog_392	167.7	0	metal-dependent hydrolase	other
UniRef90	UHGV-2122728_13	UniRef90_UPI00195A5026	231.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-2122728_13	1203606.HMPREF1526_00311	188.0	0	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-2122728_13	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
COG	UHGV-2122728_13	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-2122728_13	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
KOfam	UHGV-2122728_14	K03111	129.5	3.8e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-2122728_14	phrog_44	126.5	2e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2122728_14	UniRef90_A0A1I5U1X5	152.0	4.2039e-45	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-2122728_14	693746.OBV_19910	147.0	5.04467e-44	Single-strand binding protein family	N/A
Pfam	UHGV-2122728_14	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-2122728_14	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-2122728_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-2122728_14	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-2122728_14	PF00436,MF_00984,NF005406,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_15	phrog_13246	65.0	6.6e-19	replisome organizer	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2122728_15	445972.ANACOL_03338	64.3	0.00000000373	DnaD domain protein	N/A
Pfam	UHGV-2122728_15	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-2122728_15	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-2122728_15	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_16	phrog_997	108.7	4e-32	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2122728_16	UniRef90_R6MCS9	100.0	3.96e-25	N/A	N/A
eggNOG-mapper	UHGV-2122728_16	1203606.HMPREF1526_01889	109.0	2.36e-29	replication terminator protein, phage associated	N/A
eggNOG-mapper	UHGV-2122728_17	552398.HMPREF0866_01625	86.7	4.3e-19	N/A	N/A
Pfam	UHGV-2122728_19	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-2122728_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2122728_19	PF13560,NF007257,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2122728_21	445972.ANACOL_01835	61.2	0.000000000131	N/A	N/A
structural_annotation	UHGV-2122728_21	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_22	phrog_1595	54.7	8.7e-16	terminase small subunit	head and packaging
UniRef90	UHGV-2122728_22	UniRef90_UPI001CF819B6	115.0	4.19e-30	terminase	N/A
eggNOG-mapper	UHGV-2122728_22	1140002.I570_04018	115.0	9.37e-31	DNA packaging	N/A
COG	UHGV-2122728_22	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-2122728_23	K06909	130.1	2.1e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2122728_23	phrog_10250	201.2	0	N/A	unknown function
UniRef90	UHGV-2122728_23	UniRef90_A0A316PPL4	565.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2122728_23	877414.ATWA01000001_gene906	540.0	0	Terminase-like family	N/A
Pfam	UHGV-2122728_23	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-2122728_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2122728_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2122728_23	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_24	phrog_64	361.1	0	portal protein	head and packaging
UniRef90	UHGV-2122728_24	UniRef90_A0A316PPQ6	603.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2122728_24	877414.ATWA01000001_gene907	547.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-2122728_24	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-2122728_24	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-2122728_24	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_25	phrog_115	277.5	0	minor head protein	head and packaging
UniRef90	UHGV-2122728_25	UniRef90_UPI00157127C3	425.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2122728_25	1209989.TepiRe1_1146	217.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-2122728_25	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-2122728_25	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-2122728_25	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2122728_25	PF15542,PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2122728_26	PF11344	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_27	phrog_172	117.8	9.9e-35	head scaffolding protein	head and packaging
UniRef90	UHGV-2122728_27	UniRef90_A0A316RQZ9	113.0	1.79e-27	Phage capsid protein	N/A
eggNOG-mapper	UHGV-2122728_27	1499683.CCFF01000014_gene3909	98.6	1.45e-22	N/A	N/A
Pfam	UHGV-2122728_27	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-2122728_27	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_28	phrog_283	294.3	0	major head protein	head and packaging
UniRef90	UHGV-2122728_28	UniRef90_A0A1I2NUB2	516.0	0	p22 coat protein-gene protein 5	N/A
eggNOG-mapper	UHGV-2122728_28	1499683.CCFF01000014_gene3908	512.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-2122728_28	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-2122728_28	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2122728_30	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_32	phrog_5	46.1	0.0000000000012	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-2122728_32	1235800.C819_00481	65.9	0.0000000000355	N/A	N/A
Pfam	UHGV-2122728_32	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-2122728_32	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_33	phrog_78	42.3	0.000000000012	tail terminator	connector
structural_annotation	UHGV-2122728_33	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_34	phrog_158	50.4	0.000000000000038	major tail protein	tail
UniRef90	UHGV-2122728_34	UniRef90_R5YR40	181.0	0	Major tail protein putative	N/A
eggNOG-mapper	UHGV-2122728_34	1280692.AUJL01000025_gene2074	72.8	0.0000000000000209	Phage tail tube protein, TTP	N/A
Pfam	UHGV-2122728_34	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-2122728_34	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2122728_35	PF11836	N/A	N/A	N/A	N/A
KOfam	UHGV-2122728_37	K10421	42.3	0.0000000000036	CLIP1, RSN; CAP-Gly domain-containing linker protein 1	N/A
PHROG	UHGV-2122728_37	phrog_1535	158.8	0	tail length tape measure protein	tail
COG	UHGV-2122728_37	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2122728_37	PF20155,MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_38	phrog_1194	89.8	2.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-2122728_38	877414.ATWA01000001_gene917	145.0	2.158e-43	N/A	N/A
structural_annotation	UHGV-2122728_38	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2122728_39	phrog_22212	91.1	4.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-2122728_39	469596.HMPREF9488_01318	76.6	0.00000000000109	N/A	N/A
PHROG	UHGV-2122728_41	phrog_1863	71.2	7.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-2122728_41	693746.OBV_18260	108.0	4.52e-30	N/A	N/A
PHROG	UHGV-2122728_42	phrog_443	51.1	0.000000000000032	holin	lysis
UniRef90	UHGV-2122728_42	UniRef90_R6R2Q3	82.8	1.62e-19	Conserved domain protein	N/A
eggNOG-mapper	UHGV-2122728_42	1235797.C816_04172	79.0	9.32e-19	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-2122728_42	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-2122728_42	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-2122728_43	K01185	161.0	0	E3.2.1.17; lysozyme [EC:3.2.1.17]	N/A
PHROG	UHGV-2122728_43	phrog_7	186.1	0	endolysin	lysis
UniRef90	UHGV-2122728_43	UniRef90_A0A841WQ48	158.0	1.15047e-42	Lysozyme	N/A
eggNOG-mapper	UHGV-2122728_43	640513.Entas_4674	143.0	7.49e-39	lysozyme	N/A
Pfam	UHGV-2122728_43	PF00959	N/A	N/A	Phage lysozyme	Phage_lysozyme
Pfam	UHGV-2122728_43	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-2122728_43	COG3772	N/A	N/A	Phage-related lysozyme (muramidase), GH24 family	N/A
HAMAP	UHGV-2122728_43	MF_04110	N/A	N/A	Endolysin	N/A
structural_annotation	UHGV-2122728_43	PF01471,PF00959,MF_04110,COG3772,COG3409	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2122728	Yes	31,197	56	100	1