vOTU vOTU-085432

vOTU: vOTU-085432

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-085432
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-13871 → vSUBGEN-22714 → vOTU-085432
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0349123
Biosample ID	SAMN07521792
Genome length (bp)	46,213 bps
CheckV completeness	99.90% (High-quality)
CDS count	63
CDS density	91.04%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235	Total connections	253	Host agreement	82.21
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235	Total connections	28	Host agreement	92.86

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0349123_1	phrog_3136	42.5	0.00000000001	N/A	unknown function
eggNOG-mapper	UHGV-0349123_4	445972.ANACOL_00168	49.7	0.000000443	N/A	N/A
KOfam	UHGV-0349123_6	K22300	46.2	0.00000000000094	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0349123_6	phrog_8	68.6	1.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0349123_6	UniRef90_A0A8D9PDC4	104.0	5.2e-28	Repressor protein	N/A
eggNOG-mapper	UHGV-0349123_6	1226322.HMPREF1545_00039	76.6	1.13e-17	sequence-specific DNA binding	N/A
Pfam	UHGV-0349123_6	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0349123_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0349123_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0349123_7	UniRef90_UPI0009523D83	163.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0349123_7	1226322.HMPREF1545_00042	159.0	0	N/A	N/A
structural_annotation	UHGV-0349123_7	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0349123_8	K06909	130.4	1.7e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0349123_8	phrog_10250	172.4	0	N/A	unknown function
UniRef90	UHGV-0349123_8	UniRef90_UPI000462EB3C	653.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0349123_8	1226322.HMPREF1545_00043	582.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0349123_8	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0349123_8	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0349123_8	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0349123_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0349123_8	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_9	phrog_533	306.4	0	portal protein	head and packaging
UniRef90	UHGV-0349123_9	UniRef90_UPI00189D71DB	582.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0349123_9	1232443.BAIA02000078_gene36	560.0	0	N/A	N/A
structural_annotation	UHGV-0349123_9	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_11	phrog_9479	140.1	1.10002e-41	N/A	unknown function
eggNOG-mapper	UHGV-0349123_11	1514668.JOOA01000002_gene2680	56.2	0.0000000268	N/A	N/A
structural_annotation	UHGV-0349123_11	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_12	phrog_8680	227.9	0	N/A	unknown function
UniRef90	UHGV-0349123_12	UniRef90_UPI00189ACAD3	268.0	0	N/A	N/A
eggNOG-mapper	UHGV-0349123_12	411470.RUMGNA_02208	238.0	0	N/A	N/A
Pfam	UHGV-0349123_12	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0349123_12	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_14	phrog_581	272.3	0	minor head protein	head and packaging
UniRef90	UHGV-0349123_14	UniRef90_UPI001D080D49	540.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0349123_14	1226322.HMPREF1545_00046	352.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0349123_14	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0349123_14	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0349123_14	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_18	phrog_194	53.2	0.0000000000000056	head scaffolding protein	head and packaging
UniRef90	UHGV-0349123_18	UniRef90_UPI00189CE417	131.0	3.49e-35	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0349123_18	1232443.BAIA02000078_gene31	138.0	6.39e-39	N/A	N/A
structural_annotation	UHGV-0349123_18	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_19	phrog_909	45.9	0.0000000000006	major head protein	head and packaging
UniRef90	UHGV-0349123_19	UniRef90_K1TUL5	71.2	0.000000000000971	N/A	N/A
eggNOG-mapper	UHGV-0349123_19	60520.HR47_13470	54.7	0.000000284	N/A	N/A
Pfam	UHGV-0349123_19	PF09479	N/A	N/A	Listeria-Bacteroides repeat domain (List_Bact_rpt)	Flg_new
structural_annotation	UHGV-0349123_19	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_20	phrog_29	178.4	0	major head protein	head and packaging
UniRef90	UHGV-0349123_20	UniRef90_UPI0004AE1FFD	433.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0349123_20	1232443.BAIA02000078_gene29	433.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0349123_20	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0349123_20	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_21	phrog_541	89.4	3.1e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0349123_21	411462.DORLON_00785	51.6	0.0000022	N/A	N/A
PHROG	UHGV-0349123_22	phrog_3366	89.4	3.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-0349123_22	1226322.HMPREF1545_00053	152.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-0349123_22	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_23	phrog_556	69.7	3.4e-20	minor head protein	head and packaging
UniRef90	UHGV-0349123_23	UniRef90_A0A2U1BEM0	191.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0349123_23	1226322.HMPREF1545_00054	153.0	0	Minor capsid protein	N/A
Pfam	UHGV-0349123_23	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0349123_23	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_24	phrog_3266	58.9	8.4e-17	tail completion	connector
eggNOG-mapper	UHGV-0349123_24	1232443.BAIA02000078_gene24	187.0	0	N/A	N/A
structural_annotation	UHGV-0349123_24	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_25	phrog_3099	94.7	1.1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0349123_25	1232443.BAIA02000078_gene23	240.0	0	N/A	N/A
structural_annotation	UHGV-0349123_25	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_26	phrog_11299	73.4	3.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0349123_26	693746.OBV_18160	181.0	0	N/A	N/A
structural_annotation	UHGV-0349123_26	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_27	phrog_706	110.2	1.6e-32	N/A	unknown function
UniRef90	UHGV-0349123_27	UniRef90_UPI001D069FB9	244.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0349123_27	693746.OBV_18170	182.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0349123_27	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0349123_27	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_28	phrog_17658	60.8	2.2e-17	N/A	unknown function
UniRef90	UHGV-0349123_28	UniRef90_A0A316PG91	85.5	1.53e-16	zinc_ribbon_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0349123_28	768710.DesyoDRAFT_1122	82.8	9.23e-17	N/A	N/A
structural_annotation	UHGV-0349123_28	PF18116,COG3402	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_29	phrog_1535	90.4	9e-36	tail length tape measure protein	tail
UniRef90	UHGV-0349123_29	UniRef90_A0A810PX76	104.0	1.91e-19	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0349123_29	693746.OBV_18190	232.0	0	domain protein	N/A
COG	UHGV-0349123_29	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0349123_29	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_30	phrog_1194	85.7	4.4e-25	N/A	unknown function
eggNOG-mapper	UHGV-0349123_30	1232443.BAIA02000078_gene17	123.0	9.58e-35	N/A	N/A
structural_annotation	UHGV-0349123_30	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_31	phrog_32308	43.1	0.00000000000065	N/A	unknown function
UniRef90	UHGV-0349123_31	UniRef90_A0A2Z4QA17	265.0	0	KID repeat-containing protein	N/A
eggNOG-mapper	UHGV-0349123_31	1235797.C816_04180	313.0	0	N/A	N/A
structural_annotation	UHGV-0349123_31	PF21683,TIGR02126,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0349123_32	1235797.C816_04179	210.0	0	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0349123_32	PF14594	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0349123_33	PF20942,NF041894,COG5456	N/A	N/A	N/A	N/A
KOfam	UHGV-0349123_35	K19721	58.1	4e-17	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
PHROG	UHGV-0349123_35	phrog_21962	58.7	8e-20	tail protein	tail
UniRef90	UHGV-0349123_35	UniRef90_A0A858MRS5	62.0	0.00000114	Putative tail fiber protein	N/A
eggNOG-mapper	UHGV-0349123_35	1519439.JPJG01000060_gene1892	305.0	0	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0349123_35	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0349123_35	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0349123_37	phrog_27545	154.4	0	N/A	unknown function
UniRef90	UHGV-0349123_37	UniRef90_A0A2V2GQB6	180.0	0	Chitin-binding type-3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0349123_37	1519439.JPJG01000060_gene1895	334.0	0	N/A	N/A
Pfam	UHGV-0349123_37	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0349123_37	PF16170	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_38	phrog_12105	58.4	1.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0349123_38	1519439.JPJG01000060_gene1891	56.2	0.0000000202	N/A	N/A
eggNOG-mapper	UHGV-0349123_39	1226322.HMPREF1545_00783	82.0	0.0000000000000108	Chaperone of endosialidase	N/A
structural_annotation	UHGV-0349123_39	PF07902,NF041249	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0349123_40	PF18707,NF041740,COG5501	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_42	phrog_511	189.1	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0349123_42	1226322.HMPREF1545_00785	444.0	0	N/A	N/A
structural_annotation	UHGV-0349123_42	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0349123_43	1519439.JPJG01000060_gene1904	123.0	4.53e-28	N/A	N/A
PHROG	UHGV-0349123_44	phrog_22978	796.0	0	N/A	unknown function
UniRef90	UHGV-0349123_44	UniRef90_UPI001C019A6F	496.0	0	OmpH family outer membrane protein	N/A
eggNOG-mapper	UHGV-0349123_44	1519439.JPJG01000011_gene53	394.0	0	N/A	N/A
eggNOG-mapper	UHGV-0349123_45	1519439.JPJG01000023_gene533	66.6	0.000000000000243	N/A	N/A
PHROG	UHGV-0349123_47	phrog_13256	64.4	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0349123_47	1226322.HMPREF1545_00132	75.1	5.84e-17	N/A	N/A
KOfam	UHGV-0349123_48	K17733	92.4	4.8e-27	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0349123_48	phrog_6523	78.9	7.8e-23	endolysin	lysis
UniRef90	UHGV-0349123_48	UniRef90_A0A3D4D7X9	221.0	0	Peptidase_M15_4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0349123_48	1519439.JPJG01000023_gene536	216.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0349123_48	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0349123_48	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0349123_48	PF02557,MF_01924,NF000380,COG1876	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0349123_51	PF18573,NF033147	N/A	N/A	N/A	N/A
KOfam	UHGV-0349123_54	K14059	143.1	3.30006e-42	int; integrase	N/A
PHROG	UHGV-0349123_54	phrog_1	148.1	7.14662e-44	integrase	integration and excision
UniRef90	UHGV-0349123_54	UniRef90_A0A1C5W824	546.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0349123_54	693746.OBV_41260	297.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0349123_54	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0349123_54	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0349123_54	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0349123_55	UniRef90_A0A354UMM3	52.0	0.00000835	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0349123_55	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0349123_55	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-0349123_55	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0349123_56	PF10754	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_58	phrog_8	51.1	0.000000000000032	transcriptional regulator	transcription regulation
UniRef90	UHGV-0349123_58	UniRef90_UPI000C7BE75B	99.8	6.81e-25	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0349123_58	742738.HMPREF9460_02485	78.6	2.34e-17	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0349123_58	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0349123_58	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0349123_58	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0349123_59	phrog_8	41.9	0.000000000022	transcriptional regulator	transcription regulation
UniRef90	UHGV-0349123_59	UniRef90_UPI001663839E	61.6	0.0000000000378	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0349123_59	1378168.N510_01712	58.9	0.00000000142	N/A	N/A
Pfam	UHGV-0349123_59	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0349123_59	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0349123_61	PF11112,COG3311	N/A	N/A	N/A	N/A
COG	UHGV-0349123_63	COG1773	N/A	N/A	Flavorubredoxin	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0349123	Yes	46,213	54	100	1