vOTU vOTU-085837

vOTU: vOTU-085837

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-085837
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00117 → vGENUS-15918 → vSUBGEN-28185 → vOTU-085837
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0013968
Biosample ID	SAMEA11460267
Genome length (bp)	36,264 bps
CheckV completeness	95.18% (High-quality)
CDS count	50
CDS density	92.41%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	68	Host agreement	98.53
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → ERR7738582_bin.134	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 95.18)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0013968_1	K14059	134.9	1.1e-39	int; integrase	N/A
PHROG	UHGV-0013968_1	phrog_1	166.6	0	integrase	integration and excision
UniRef90	UHGV-0013968_1	UniRef90_A0A7C9H3C8	597.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0013968_1	1235792.C808_01553	478.0	0	Phage integrase family	N/A
Pfam	UHGV-0013968_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0013968_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0013968_1	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_2	phrog_27136	150.0	5.60519e-45	N/A	unknown function
UniRef90	UHGV-0013968_2	UniRef90_UPI00140C7F42	292.0	0	zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0013968_2	1282664.H354_06486	139.0	6.49e-38	Short C-terminal domain	N/A
COG	UHGV-0013968_3	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
PHROG	UHGV-0013968_4	phrog_3845	74.6	1.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0013968_4	768710.DesyoDRAFT_5205	104.0	3.51e-25	PFAM Tellurite resistance protein TerB	N/A
COG	UHGV-0013968_4	COG3793	N/A	N/A	Tellurite resistance protein TerB	N/A
UniRef90	UHGV-0013968_5	UniRef90_A0A7X8ZBG7	56.2	0.00000000743	ImmA/IrrE family metallo-endopeptidase	N/A
structural_annotation	UHGV-0013968_5	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_6	phrog_2967	57.7	1.7e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0013968_6	UniRef90_R6A4U7	221.0	0	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0013968_6	1235798.C817_00620	98.6	2.4e-24	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0013968_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0013968_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
UniRef90	UHGV-0013968_7	UniRef90_UPI000E7391FB	70.5	0.0000000000000194	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0013968_7	1321782.HMPREF1986_02244	58.2	0.000000000289	Helix-turn-helix domain	N/A
Pfam	UHGV-0013968_7	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0013968_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0013968_13	phrog_6058	67.1	1.8e-19	N/A	unknown function
UniRef90	UHGV-0013968_13	UniRef90_A0A0U9H7T0	68.2	0.000000000000117	Modification methylase SinI	N/A
eggNOG-mapper	UHGV-0013968_13	411468.CLOSCI_01465	108.0	2.15e-30	N/A	N/A
structural_annotation	UHGV-0013968_13	PF12728,TIGR01764	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_14	phrog_20014	74.2	5e-22	N/A	unknown function
eggNOG-mapper	UHGV-0013968_14	742741.HMPREF9475_00408	80.9	7.52e-19	N/A	N/A
PHROG	UHGV-0013968_16	phrog_3584	150.8	7.00649e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0013968_16	1235800.C819_02258	285.0	0	N/A	N/A
structural_annotation	UHGV-0013968_16	PF21578,NF041486	N/A	N/A	N/A	N/A
KOfam	UHGV-0013968_17	K03469	83.5	3.5e-24	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-0013968_17	phrog_531	78.3	1.1e-22	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0013968_17	UniRef90_A0A350VVB3	120.0	5.81e-32	RNase H type-1 domain-containing protein	N/A
Pfam	UHGV-0013968_17	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-0013968_17	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-0013968_17	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0013968_18	483218.BACPEC_01167	203.0	0	N/A	N/A
PHROG	UHGV-0013968_19	phrog_8470	305.6	0	N/A	unknown function
UniRef90	UHGV-0013968_19	UniRef90_UPI0010204BDF	172.0	9.09022e-42	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0013968_19	483218.BACPEC_01166	464.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0013968_19	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0013968_19	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_20	phrog_15077	119.6	3.6e-35	N/A	unknown function
UniRef90	UHGV-0013968_20	UniRef90_A0A3E3IZW1	229.0	0	N/A	N/A
eggNOG-mapper	UHGV-0013968_20	1280698.AUJS01000007_gene1019	218.0	0	N/A	N/A
structural_annotation	UHGV-0013968_20	PF11300,NF038070	N/A	N/A	N/A	N/A
UniRef90	UHGV-0013968_21	UniRef90_A0A417WAJ1	148.0	3.64338e-44	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0013968_21	1235800.C819_02254	124.0	3.76e-35	HNH nucleases	N/A
UniRef90	UHGV-0013968_23	UniRef90_UPI001922D167	216.0	0	N/A	N/A
eggNOG-mapper	UHGV-0013968_23	585394.RHOM_04340	207.0	0	N/A	N/A
Pfam	UHGV-0013968_23	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-0013968_23	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_24	phrog_36	83.0	4.3e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0013968_24	UniRef90_UPI001F14539B	191.0	0	N/A	N/A
eggNOG-mapper	UHGV-0013968_24	1235800.C819_02243	180.0	0	N/A	N/A
Pfam	UHGV-0013968_24	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0013968_24	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_25	phrog_2538	92.5	3.7e-27	terminase small subunit	head and packaging
UniRef90	UHGV-0013968_25	UniRef90_A0A1C5UE81	146.0	5.25487e-43	HTH_Tnp_1_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0013968_25	1140002.I570_01447	65.9	0.00000000000394	Helix-turn-helix of insertion element transposase	N/A
Pfam	UHGV-0013968_25	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-0013968_25	PF13022	N/A	N/A	N/A	N/A
KOfam	UHGV-0013968_26	K06909	97.2	2.1e-28	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0013968_26	phrog_2	74.9	1.8e-21	terminase large subunit	head and packaging
UniRef90	UHGV-0013968_26	UniRef90_A0A413YU24	863.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0013968_26	1282664.H354_06621	520.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0013968_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0013968_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0013968_26	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_27	phrog_533	285.4	0	portal protein	head and packaging
UniRef90	UHGV-0013968_27	UniRef90_A0A356C6G5	751.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0013968_27	742740.HMPREF9474_03501	560.0	0	N/A	N/A
structural_annotation	UHGV-0013968_27	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_28	phrog_581	249.2	0	minor head protein	head and packaging
UniRef90	UHGV-0013968_28	UniRef90_A0A413YU28	624.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0013968_28	33035.JPJF01000093_gene2255	465.0	0	N/A	N/A
Pfam	UHGV-0013968_28	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0013968_28	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0013968_28	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-0013968_28	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_30	phrog_872	172.3	0	N/A	unknown function
UniRef90	UHGV-0013968_30	UniRef90_A0A3R6QU45	249.0	0	N/A	N/A
eggNOG-mapper	UHGV-0013968_30	1519439.JPJG01000060_gene1880	147.0	5.9401e-42	N/A	N/A
Pfam	UHGV-0013968_30	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0013968_30	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0013968_30	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_31	phrog_2303	140.1	1.49995e-41	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0013968_31	1304866.K413DRAFT_0806	150.0	1.27939e-42	N/A	N/A
PHROG	UHGV-0013968_32	phrog_422	357.6	0	major head protein	head and packaging
UniRef90	UHGV-0013968_32	UniRef90_A0A356C4N2	483.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0013968_32	742740.HMPREF9474_03505	450.0	0	N/A	N/A
PHROG	UHGV-0013968_33	phrog_1378	64.1	1.8e-18	N/A	unknown function
UniRef90	UHGV-0013968_33	UniRef90_A0A0B3VH35	52.0	0.000000653	HALZ domain-containing protein	N/A
eggNOG-mapper	UHGV-0013968_33	1415775.U729_2606	67.4	0.000000000000101	N/A	N/A
PHROG	UHGV-0013968_34	phrog_541	83.6	2.1e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-0013968_34	1304866.K413DRAFT_0783	153.0	0	N/A	N/A
PHROG	UHGV-0013968_35	phrog_8710	133.6	6.10001e-40	N/A	unknown function
eggNOG-mapper	UHGV-0013968_35	483218.BACPEC_01152	115.0	4.31e-32	N/A	N/A
structural_annotation	UHGV-0013968_35	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_36	phrog_556	54.0	0.0000000000000025	minor head protein	head and packaging
eggNOG-mapper	UHGV-0013968_36	742740.HMPREF9474_03509	137.0	8.27e-40	N/A	N/A
PHROG	UHGV-0013968_37	phrog_2595	81.4	1e-23	head-tail connector protein	connector
UniRef90	UHGV-0013968_37	UniRef90_UPI00164BAA81	140.0	1.75e-40	minor capsid protein	N/A
eggNOG-mapper	UHGV-0013968_37	742740.HMPREF9474_03510	131.0	1.78e-37	N/A	N/A
Pfam	UHGV-0013968_37	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0013968_37	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_38	phrog_820	115.5	3.2e-34	major tail protein	tail
UniRef90	UHGV-0013968_38	UniRef90_T3DDR1	189.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-0013968_38	1151292.QEW_2426	189.0	0	N/A	N/A
structural_annotation	UHGV-0013968_38	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_39	phrog_8300	62.8	5.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0013968_39	1151292.QEW_2425	54.7	0.0000000419	N/A	N/A
structural_annotation	UHGV-0013968_39	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_40	phrog_8355	113.6	4.4e-34	N/A	unknown function
UniRef90	UHGV-0013968_40	UniRef90_UPI0006BBA9AA	166.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0013968_40	394503.Ccel_3036	118.0	1.02e-32	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0013968_40	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0013968_40	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_41	phrog_1535	229.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0013968_41	UniRef90_A0A1C5PIN9	432.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0013968_41	742733.HMPREF9469_01814	320.0	0	tape measure	N/A
COG	UHGV-0013968_41	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0013968_41	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_42	phrog_1194	78.0	1e-22	N/A	unknown function
eggNOG-mapper	UHGV-0013968_42	33035.JPJF01000093_gene2242	153.0	0	N/A	N/A
structural_annotation	UHGV-0013968_42	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_43	phrog_1401	62.8	5.3e-18	N/A	unknown function
UniRef90	UHGV-0013968_43	UniRef90_UPI00077668B1	69.3	0.00000000000164	N/A	N/A
eggNOG-mapper	UHGV-0013968_43	1294142.CINTURNW_1705	66.2	0.00000000000449	N/A	N/A
structural_annotation	UHGV-0013968_43	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_44	phrog_6616	155.8	0	tail protein	tail
UniRef90	UHGV-0013968_44	UniRef90_A0A356C4L7	776.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0013968_44	1294142.CINTURNW_1706	270.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0013968_44	PF11839	N/A	N/A	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
Pfam	UHGV-0013968_44	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0013968_44	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0013968_44	PF06605,PF20086,PF18099,TIGR01665,NF033675,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0013968_45	phrog_1863	61.1	2.8e-18	N/A	unknown function
eggNOG-mapper	UHGV-0013968_45	1226322.HMPREF1545_04027	70.9	0.00000000000000402	N/A	N/A
PHROG	UHGV-0013968_46	phrog_443	50.9	0.000000000000045	holin	lysis
UniRef90	UHGV-0013968_46	UniRef90_UPI001570A68C	92.0	5.82e-23	holin	N/A
eggNOG-mapper	UHGV-0013968_46	411463.EUBVEN_02210	85.9	2.22e-21	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0013968_46	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0013968_46	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0013968_47	K07273	172.4	0	acm; lysozyme	N/A
PHROG	UHGV-0013968_47	phrog_291	115.1	6.6e-34	endolysin	lysis
UniRef90	UHGV-0013968_47	UniRef90_A0A174GRH8	278.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0013968_47	1235800.C819_00458	225.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0013968_47	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0013968_47	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0013968_47	PF01183,NF003627,COG3757,COG5492	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0013968_49	1235799.C818_04214	71.6	0.000000000000106	N/A	N/A
structural_annotation	UHGV-0013968_50	PF14524,NF041178	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0013968	Yes	36,264	36	95	1