vOTU vOTU-086011

vOTU: vOTU-086011

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-086011
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00261 → vGENUS-00170 → vSUBGEN-18924 → vOTU-086011
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0096831
Biosample ID	SAMEA3449292
Genome length (bp)	33,989 bps
CheckV completeness	97.57% (High-quality)
CDS count	49
CDS density	91.99%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	289	Host agreement	96.19
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	112	Host agreement	96.43

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0096831_1	UniRef90_A0A7X8ZV43	218.0	0	YwaF family protein	N/A
Pfam	UHGV-0096831_1	PF14808	N/A	N/A	TMEM164 family	TMEM164
COG	UHGV-0096831_1	COG5522	N/A	N/A	N/A	N/A
KOfam	UHGV-0096831_2	K14059	153.4	2.8026e-45	int; integrase	N/A
PHROG	UHGV-0096831_2	phrog_1	155.3	0	integrase	integration and excision
UniRef90	UHGV-0096831_2	UniRef90_A0A2Z4QB94	335.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0096831_2	626523.GCWU000342_00320	95.9	1.7e-19	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0096831_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0096831_2	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0096831_2	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_3	phrog_11623	202.5	0	N/A	unknown function
UniRef90	UHGV-0096831_3	UniRef90_A0A7X8K2Z3	282.0	0	N/A	N/A
eggNOG-mapper	UHGV-0096831_3	1111121.HMPREF1247_1100	194.0	0	Cold shock	N/A
Pfam	UHGV-0096831_3	PF12873	N/A	N/A	N/A	DUF3825
COG	UHGV-0096831_3	COG1278	N/A	N/A	Cold shock protein, CspA family	N/A
structural_annotation	UHGV-0096831_3	PF12873	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096831_4	PF21227	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0096831_5	1262449.CP6013_2082	137.0	1.28e-39	N/A	N/A
KOfam	UHGV-0096831_6	K07448	128.5	5.7e-38	mrr; restriction system protein	N/A
PHROG	UHGV-0096831_6	phrog_19856	50.7	0.000000000000018	N/A	unknown function
eggNOG-mapper	UHGV-0096831_6	1235790.C805_00010	148.0	1.32e-39	Restriction endonuclease	N/A
PADLOC	UHGV-0096831_6	ZorD1_00005	72.3	5.2e-21	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0096831_6	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0096831_6	COG1787	N/A	N/A	Endonuclease, HJR/Mrr/RecB family	N/A
KOfam	UHGV-0096831_7	K07729	57.6	3.1e-16	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0096831_7	UniRef90_R5AVU4	90.1	1.61e-22	CI-like repressor	N/A
eggNOG-mapper	UHGV-0096831_7	608538.HTH_1322	60.1	0.000000000846	PBP superfamily domain	N/A
Pfam	UHGV-0096831_7	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0096831_7	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0096831_7	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0096831_9	K22300	58.8	1.4e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0096831_9	phrog_4	51.7	0.000000000000022	transcriptional repressor	transcription regulation
UniRef90	UHGV-0096831_9	UniRef90_A0A174LY22	144.0	3.37012e-42	Antitoxin PezA	N/A
eggNOG-mapper	UHGV-0096831_9	445972.ANACOL_03315	143.0	1.61009e-42	N/A	N/A
Pfam	UHGV-0096831_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0096831_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0096831_9	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_12	phrog_750	51.5	0.000000000000011	N/A	unknown function
structural_annotation	UHGV-0096831_12	PF13835,NF040858	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_13	phrog_585	43.9	0.0000000000045	N/A	unknown function
Pfam	UHGV-0096831_13	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0096831_14	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0096831_15	K06284	114.1	8.8e-34	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0096831_15	phrog_4681	99.5	1.3e-29	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0096831_15	UniRef90_UPI0018F33479	104.0	1.42e-27	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0096831_15	268407.PWYN_12320	103.0	6.28e-28	AbrB family transcriptional regulator	N/A
Pfam	UHGV-0096831_15	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-0096831_15	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0096831_15	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0096831_15	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_18	phrog_3584	129.3	3e-38	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0096831_18	411470.RUMGNA_02047	134.0	4.38e-35	N/A	N/A
structural_annotation	UHGV-0096831_18	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0096831_19	K03700	80.3	3.1e-23	recU; recombination protein U	N/A
PHROG	UHGV-0096831_19	phrog_843	131.7	2.9e-39	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096831_19	UniRef90_A0A1H0W5Y9	159.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0096831_19	537013.CLOSTMETH_01720	146.0	9.83992e-42	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-0096831_19	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-0096831_19	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-0096831_19	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0096831_20	1232449.BAHV02000016_gene1829	134.0	1.96e-38	N/A	N/A
KOfam	UHGV-0096831_21	K06223	225.9	0	dam; DNA adenine methylase [EC:2.1.1.72]	N/A
PHROG	UHGV-0096831_21	phrog_56	173.4	0	DNA methyltransferase	other
UniRef90	UHGV-0096831_21	UniRef90_R9MCP5	304.0	0	DNA adenine methylase	N/A
eggNOG-mapper	UHGV-0096831_21	1235799.C818_02654	304.0	0	D12 class N6 adenine-specific DNA methyltransferase	N/A
PADLOC	UHGV-0096831_21	MTase_II_00030	267.3	0	Type II methyltransferase	RM
Pfam	UHGV-0096831_21	PF02086	N/A	N/A	D12 class N6 adenine-specific DNA methyltransferase	MethyltransfD12
COG	UHGV-0096831_21	COG0338	N/A	N/A	DNA-adenine methylase	N/A
structural_annotation	UHGV-0096831_21	PF02086,MF_01872,NF008152,COG0338	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_22	phrog_997	120.3	1.2e-35	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0096831_22	UniRef90_R6MCS9	110.0	7.71e-29	N/A	N/A
eggNOG-mapper	UHGV-0096831_22	1519439.JPJG01000059_gene1910	177.0	0	N/A	N/A
PHROG	UHGV-0096831_23	phrog_1029	227.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0096831_23	1203606.HMPREF1526_01890	375.0	0	N/A	N/A
structural_annotation	UHGV-0096831_23	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_24	phrog_355	64.4	1.2e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0096831_24	1048834.TC41_1868	56.6	0.0000000349	N/A	N/A
Pfam	UHGV-0096831_24	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0096831_24	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_25	phrog_36	66.1	6.6e-19	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0096831_25	428125.CLOLEP_01806	105.0	6.38e-27	N/A	N/A
Pfam	UHGV-0096831_25	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0096831_25	PF07374,TIGR01636	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096831_26	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0096831_27	K06909	396.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0096831_27	phrog_5653	148.6	3.64338e-44	terminase large subunit	head and packaging
UniRef90	UHGV-0096831_27	UniRef90_A0A416S378	633.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0096831_27	33035.JPJF01000106_gene3136	595.0	0	Terminase small subunit	N/A
Pfam	UHGV-0096831_27	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-0096831_27	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0096831_27	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0096831_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0096831_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0096831_27	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_28	phrog_1233	95.6	6.1e-28	N/A	unknown function
eggNOG-mapper	UHGV-0096831_28	1415774.U728_832	95.5	4.58e-24	N/A	N/A
structural_annotation	UHGV-0096831_28	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_29	phrog_533	212.2	0	portal protein	head and packaging
UniRef90	UHGV-0096831_29	UniRef90_A0A173TY48	345.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0096831_29	33035.JPJF01000106_gene3135	332.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0096831_29	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_30	phrog_581	243.2	0	minor head protein	head and packaging
UniRef90	UHGV-0096831_30	UniRef90_A0A3D4T830	340.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0096831_30	476272.RUMHYD_01761	216.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0096831_30	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0096831_30	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-0096831_30	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096831_30	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_32	phrog_194	43.9	0.000000000005	head scaffolding protein	head and packaging
UniRef90	UHGV-0096831_32	UniRef90_UPI001C0EBA51	126.0	6.74e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0096831_32	1539298.JO41_08210	60.1	0.0000000125	Phage minor structural protein GP20	N/A
Pfam	UHGV-0096831_32	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0096831_32	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_33	phrog_267	53.7	0.0000000000000032	major head protein	head and packaging
eggNOG-mapper	UHGV-0096831_33	1235799.C818_04223	160.0	1.12104e-44	N/A	N/A
structural_annotation	UHGV-0096831_33	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_34	phrog_541	68.7	8e-20	head-tail adaptor	connector
eggNOG-mapper	UHGV-0096831_34	476272.RUMHYD_01778	72.4	0.0000000000000608	N/A	N/A
PHROG	UHGV-0096831_35	phrog_3366	52.3	0.000000000000011	N/A	unknown function
structural_annotation	UHGV-0096831_35	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_36	phrog_556	63.4	7.3e-19	minor head protein	head and packaging
UniRef90	UHGV-0096831_36	UniRef90_A0A1H7MNM8	117.0	1.14e-30	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0096831_36	476272.RUMHYD_01780	115.0	4.23e-31	N/A	N/A
Pfam	UHGV-0096831_36	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0096831_36	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_37	phrog_3266	64.4	1.6e-18	tail completion	connector
eggNOG-mapper	UHGV-0096831_37	476272.RUMHYD_01781	120.0	2.72e-32	N/A	N/A
structural_annotation	UHGV-0096831_37	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_38	phrog_3099	88.4	9.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0096831_38	693746.OBV_18150	223.0	0	N/A	N/A
structural_annotation	UHGV-0096831_38	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_39	phrog_11299	102.1	5.4e-30	N/A	unknown function
eggNOG-mapper	UHGV-0096831_39	1449050.JNLE01000003_gene3883	69.3	0.000000000000685	N/A	N/A
structural_annotation	UHGV-0096831_39	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_40	phrog_706	110.4	1.7e-32	N/A	unknown function
UniRef90	UHGV-0096831_40	UniRef90_UPI00164D7633	177.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0096831_40	693746.OBV_18170	171.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0096831_40	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0096831_40	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_41	phrog_1535	125.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0096831_41	UniRef90_A0A810PX76	114.0	7.05e-23	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0096831_41	1449050.JNLE01000003_gene3881	138.0	4.78e-31	domain protein	N/A
COG	UHGV-0096831_41	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096831_41	PF16789,TIGR02473	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0096831_42	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_43	phrog_6616	60.1	6.4e-18	tail protein	tail
eggNOG-mapper	UHGV-0096831_44	411473.RUMCAL_00420	58.9	0.000000282	nuclear chromosome segregation	N/A
COG	UHGV-0096831_44	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0096831_45	PF00629,NF033675	N/A	N/A	N/A	N/A
KOfam	UHGV-0096831_46	K16628	97.0	6.4e-29	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0096831_46	phrog_11541	94.6	4.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-0096831_46	1175629.AJTG01000006_gene514	122.0	2.35e-28	N/A	N/A
Pfam	UHGV-0096831_46	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0096831_46	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
KOfam	UHGV-0096831_47	K01447	86.3	5.5e-25	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0096831_47	phrog_5182	161.4	0	endolysin	lysis
UniRef90	UHGV-0096831_47	UniRef90_R5AZE6	319.0	0	N-acetylmuramoyl-L-alanine amidase family 2	N/A
eggNOG-mapper	UHGV-0096831_47	397288.C806_00777	219.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0096831_47	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0096831_47	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0096831_47	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0096831_48	phrog_199	64.2	1.6e-18	holin	lysis
UniRef90	UHGV-0096831_48	UniRef90_R5AT18	281.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0096831_48	742738.HMPREF9460_00365	150.0	2.52234e-44	Bacteriophage holin family	N/A
Pfam	UHGV-0096831_48	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0096831_48	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0096831_48	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0096831_48	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-0096831_49	K18908	114.3	1.1e-33	mepA; multidrug efflux pump	N/A
PHROG	UHGV-0096831_49	phrog_6241	136.9	1.6e-40	N/A	unknown function
UniRef90	UHGV-0096831_49	UniRef90_A0A3B9WSU1	165.0	0	MATE family efflux transporter (Fragment)	N/A
eggNOG-mapper	UHGV-0096831_49	445971.ANASTE_00505	184.0	0	N/A	N/A
Pfam	UHGV-0096831_49	PF01554	N/A	N/A	MatE	MatE
COG	UHGV-0096831_49	COG0534	N/A	N/A	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0096831	Yes	33,989	56	98	1