vOTU vOTU-086218

vOTU: vOTU-086218

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-086218
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-00630 → vGENUS-08621 → vSUBGEN-08852 → vOTU-086218
Host lineage	Bacteria → Firmicutes
Host range breadth	Phylum
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1468177
Biosample ID	SAMEA4545441
Genome length (bp)	33,907 bps
CheckV completeness	92.63% (High-quality)
CDS count	65
CDS density	91.67%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes	Total connections	34	Host agreement	55.88
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → Onthocola_B → Onthocola_B sp900544625	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 92.63)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1468177_1	K14059	105.5	8.4e-31	int; integrase	N/A
PHROG	UHGV-1468177_1	phrog_1	134.9	8e-40	integrase	integration and excision
UniRef90	UHGV-1468177_1	UniRef90_R7NIV8	251.0	0	Site-specific recombinase phage integrase family	N/A
eggNOG-mapper	UHGV-1468177_1	558169.AGAV01000001_gene3323	234.0	0	Phage integrase family	N/A
Pfam	UHGV-1468177_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1468177_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1468177_1	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_3	phrog_87	41.1	0.000000000021	metallo-protease	other
UniRef90	UHGV-1468177_3	UniRef90_A0A3B8SNC0	125.0	3.77e-35	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1468177_3	428126.CLOSPI_00815	49.7	0.00000179	N/A	N/A
Pfam	UHGV-1468177_3	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
structural_annotation	UHGV-1468177_3	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-1468177_4	K22300	65.6	1e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1468177_4	phrog_8	61.6	1.8e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1468177_4	UniRef90_A0A220MGL7	66.2	0.000000000011	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1468177_4	1449050.JNLE01000005_gene4627	59.3	0.00000000159	Transcriptional	N/A
Pfam	UHGV-1468177_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1468177_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1468177_4	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1468177_5	UniRef90_UPI001897B0FF	69.3	0.0000000000000434	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1468177_5	411461.DORFOR_00030	60.5	0.0000000000219	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1468177_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1468177_5	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_7	phrog_9607	90.0	2.7e-26	N/A	unknown function
eggNOG-mapper	UHGV-1468177_7	1304866.K413DRAFT_4639	85.5	1.96e-18	N/A	N/A
structural_annotation	UHGV-1468177_7	PF02883,MF_00791,NF012200,COG3354	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_8	phrog_6058	68.3	6.8e-20	N/A	unknown function
UniRef90	UHGV-1468177_8	UniRef90_A0A0U9H7T0	70.5	0.0000000000000173	Modification methylase SinI	N/A
eggNOG-mapper	UHGV-1468177_8	411468.CLOSCI_01465	73.2	2.77e-16	N/A	N/A
structural_annotation	UHGV-1468177_8	PF12728,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_10	phrog_15768	44.8	0.0000000000022	N/A	unknown function
Pfam	UHGV-1468177_10	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1468177_10	PF19808	N/A	N/A	N/A	N/A
Pfam	UHGV-1468177_11	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
PHROG	UHGV-1468177_12	phrog_1123	45.6	0.00000000000086	N/A	unknown function
UniRef90	UHGV-1468177_12	UniRef90_A0A7X6P6Q9	82.0	4.36e-18	DNA gyrase	N/A
eggNOG-mapper	UHGV-1468177_12	445972.ANACOL_03346	60.1	0.000000000275	N/A	N/A
structural_annotation	UHGV-1468177_12	PF21552,MF_01909,TIGR00373,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_14	phrog_155	115.2	5.2e-34	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1468177_14	UniRef90_A0A3B8SWQ8	217.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1468177_14	357809.Cphy_2988	193.0	0	ERF superfamily	N/A
Pfam	UHGV-1468177_14	PF04404	N/A	N/A	ERF superfamily	ERF
COG	UHGV-1468177_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1468177_14	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_15	phrog_674	135.4	3.7e-40	N/A	unknown function
UniRef90	UHGV-1468177_15	UniRef90_A0A7X7EMF4	150.0	2.58e-40	N/A	N/A
eggNOG-mapper	UHGV-1468177_15	754027.HMPREF9554_00708	133.0	6.76e-33	N/A	N/A
Pfam	UHGV-1468177_15	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1468177_15	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-1468177_18	K03111	117.1	2.3e-34	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1468177_18	phrog_44	126.0	2.8e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1468177_18	UniRef90_R7P3M7	189.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1468177_18	1033810.HLPCO_000972	113.0	1.39e-29	Single-strand binding protein family	N/A
Pfam	UHGV-1468177_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1468177_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1468177_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1468177_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1468177_18	PF00436,MF_00984,NF005242,COG0629	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1468177_19	445972.ANACOL_00148	84.3	3.73e-18	N/A	N/A
structural_annotation	UHGV-1468177_19	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_22	phrog_2044	75.5	4.4e-22	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1468177_22	UniRef90_E3DDU9	63.9	0.0000000000115	N/A	N/A
eggNOG-mapper	UHGV-1468177_22	634499.EpC_17520	64.3	0.00000000000136	N/A	N/A
structural_annotation	UHGV-1468177_22	MF_00337,NF010671,COG1722	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_23	phrog_1891	223.3	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1468177_23	UniRef90_A0A386PKY6	192.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1468177_23	696281.Desru_1079	162.0	0	HNH endonuclease	N/A
Pfam	UHGV-1468177_23	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1468177_23	PF13392	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1468177_27	PF13780,NF005100,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_30	phrog_625	72.1	4.1e-21	N/A	unknown function
UniRef90	UHGV-1468177_30	UniRef90_A0A3E3EHP8	120.0	2.5e-33	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1468177_30	1235800.C819_02245	107.0	6.76e-29	N/A	N/A
structural_annotation	UHGV-1468177_30	PF12961	N/A	N/A	N/A	N/A
KOfam	UHGV-1468177_32	K06940	62.1	1.1e-17	N/A	N/A
PHROG	UHGV-1468177_32	phrog_32498	87.3	1.2e-25	N/A	unknown function
UniRef90	UHGV-1468177_32	UniRef90_A0A174NWY7	99.4	5.15e-24	Flagellin N-methylase	N/A
eggNOG-mapper	UHGV-1468177_32	397290.C810_01479	82.8	2.61e-18	Putative zinc- or iron-chelating domain	N/A
Pfam	UHGV-1468177_32	PF03692	N/A	N/A	Putative zinc- or iron-chelating domain	CxxCxxCC
structural_annotation	UHGV-1468177_32	PF03692	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1468177_41	1444310.JANV01000162_gene1216	174.0	0	N/A	N/A
structural_annotation	UHGV-1468177_42	PF10654	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1468177_43	PF15456	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1468177_46	PF10922	N/A	N/A	N/A	N/A
UniRef90	UHGV-1468177_47	UniRef90_A0A353JAA0	122.0	2.55e-32	Terminase_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1468177_47	428125.CLOLEP_01805	93.6	1.38e-22	N/A	N/A
Pfam	UHGV-1468177_47	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
KOfam	UHGV-1468177_48	K06909	203.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1468177_48	phrog_10250	110.5	8.5e-33	N/A	unknown function
UniRef90	UHGV-1468177_48	UniRef90_A0A3B8SL24	714.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1468177_48	428127.EUBDOL_01229	509.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1468177_48	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1468177_48	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1468177_48	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1468177_48	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1468177_48	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_49	phrog_533	279.1	0	portal protein	head and packaging
UniRef90	UHGV-1468177_49	UniRef90_R6Y8H1	484.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1468177_49	545697.HMPREF0216_02845	311.0	0	N/A	N/A
structural_annotation	UHGV-1468177_49	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_50	phrog_581	246.8	0	minor head protein	head and packaging
UniRef90	UHGV-1468177_50	UniRef90_R5XZV2	234.0	0	Protein gp4	N/A
eggNOG-mapper	UHGV-1468177_50	642492.Clole_0816	165.0	5.87004e-42	N/A	N/A
Pfam	UHGV-1468177_50	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1468177_50	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1468177_50	PF06152,PF07737,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_52	phrog_194	43.9	0.0000000000039	head scaffolding protein	head and packaging
UniRef90	UHGV-1468177_52	UniRef90_UPI001C1258D3	85.9	1.13e-17	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1468177_52	536233.CLO_0885	77.4	0.00000000000000354	Phage minor structural protein GP20	N/A
Pfam	UHGV-1468177_52	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1468177_52	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_53	phrog_422	207.0	0	major head protein	head and packaging
UniRef90	UHGV-1468177_53	UniRef90_W0U896	259.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1468177_53	1232436.CAPF01000009_gene1770	270.0	0	N/A	N/A
structural_annotation	UHGV-1468177_53	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_55	phrog_541	85.6	4.6e-25	head-tail adaptor	connector
UniRef90	UHGV-1468177_55	UniRef90_A0A371AQT0	71.6	0.000000000000185	N/A	N/A
eggNOG-mapper	UHGV-1468177_55	1449050.JNLE01000003_gene3888	64.7	0.0000000000144	N/A	N/A
PHROG	UHGV-1468177_56	phrog_3366	55.3	0.0000000000000012	N/A	unknown function
structural_annotation	UHGV-1468177_56	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_57	phrog_556	60.2	3.2e-17	minor head protein	head and packaging
UniRef90	UHGV-1468177_57	UniRef90_UPI0015948E32	103.0	1.59e-25	minor capsid protein	N/A
eggNOG-mapper	UHGV-1468177_57	642492.Clole_0824	94.0	1.6e-22	Minor capsid protein	N/A
structural_annotation	UHGV-1468177_57	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_58	phrog_3266	91.3	7.6e-27	tail completion	connector
UniRef90	UHGV-1468177_58	UniRef90_A0A373KYC6	81.3	1.15e-16	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-1468177_58	411490.ANACAC_00773	95.5	5.14e-23	N/A	N/A
structural_annotation	UHGV-1468177_58	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_59	phrog_3099	85.1	8.9e-25	N/A	unknown function
eggNOG-mapper	UHGV-1468177_59	1232449.BAHV02000010_gene2720	83.2	1e-17	N/A	N/A
structural_annotation	UHGV-1468177_60	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_61	phrog_706	148.5	3.50325e-44	N/A	unknown function
UniRef90	UHGV-1468177_61	UniRef90_UPI000B35C11D	151.0	6.16571e-43	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-1468177_61	645991.Sgly_0348	160.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1468177_61	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1468177_61	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_62	phrog_1535	125.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1468177_62	UniRef90_A0A810PX76	79.3	0.00000000000741	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1468177_62	1120746.CCNL01000014_gene2105	84.7	0.0000000000000297	tape measure	N/A
COG	UHGV-1468177_62	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1468177_63	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1468177_64	phrog_6616	58.6	5.7e-17	tail protein	tail
UniRef90	UHGV-1468177_64	UniRef90_R6H354	63.5	0.000001	Carbohydrate binding domain protein	N/A
COG	UHGV-1468177_64	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1468177_64	PF05113,TIGR01665,NF041249,COG4379	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1468177	Yes	33,907	28	93	1
UHGV-1401127	No	19,347	28	53	1