vOTU vOTU-086327

vOTU: vOTU-086327

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-086327
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00239 → vGENUS-13253 → vSUBGEN-21106 → vOTU-086327
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2198834
Biosample ID	N/A
Genome length (bp)	25,490 bps
CheckV completeness	99.90% (High-quality)
CDS count	38
CDS density	88.34%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B	Total connections	804	Host agreement	75.75
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E bromii_B	Total connections	296	Host agreement	97.97

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-2198834_1	UniRef90_UPI000E4DC4DA	135.0	4.4e-38	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-2198834_1	PF15597	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_2	phrog_36	82.0	7.3e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-2198834_2	UniRef90_A0A2N0UXQ6	261.0	0	N/A	N/A
eggNOG-mapper	UHGV-2198834_2	1401067.HMPREF0872_06835	92.4	4.14e-22	N/A	N/A
Pfam	UHGV-2198834_2	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-2198834_2	PF07374,MF_00674,TIGR01636,COG2739	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2198834_5	PF02796,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-2198834_6	K22300	41.2	0.000000000032	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-2198834_6	phrog_8	51.3	0.000000000000025	transcriptional regulator	transcription regulation
UniRef90	UHGV-2198834_6	UniRef90_A0A412ULX1	139.0	1.10997e-41	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2198834_6	226185.EF_1277	55.5	0.0000000143	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2198834_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2198834_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-2198834_6	PF01381,NF007257,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_7	phrog_119	53.1	0.0000000000000044	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2198834_7	UniRef90_A0A374N9T6	248.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-2198834_7	1235793.C809_01915	121.0	1.31e-33	HNH endonuclease	N/A
COG	UHGV-2198834_7	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-2198834_8	phrog_1066	116.0	1.7e-34	N/A	unknown function
UniRef90	UHGV-2198834_8	UniRef90_A0A0D0SQQ8	86.7	1.76e-19	N/A	N/A
eggNOG-mapper	UHGV-2198834_8	1203606.HMPREF1526_00982	104.0	1.33e-27	N/A	N/A
PHROG	UHGV-2198834_9	phrog_9	395.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-2198834_9	UniRef90_A0A374NB45	981.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-2198834_9	1235793.C809_01917	723.0	0	Phage Terminase	N/A
Pfam	UHGV-2198834_9	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-2198834_9	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-2198834_9	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-2198834_9	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_10	phrog_12	180.8	0	portal protein	head and packaging
UniRef90	UHGV-2198834_10	UniRef90_A0A374NAE1	774.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2198834_10	626523.GCWU000342_01027	406.0	0	Portal protein	N/A
Pfam	UHGV-2198834_10	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-2198834_10	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-2198834_10	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_11	phrog_21498	297.4	0	N/A	unknown function
UniRef90	UHGV-2198834_11	UniRef90_C7MM70	231.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-2198834_11	469378.Ccur_02830	231.0	0	DNA binding	N/A
COG	UHGV-2198834_11	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-2198834_11	PF05869,TIGR01712	N/A	N/A	N/A	N/A
KOfam	UHGV-2198834_12	K01358	119.9	3.1e-35	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-2198834_12	phrog_94	189.5	0	head maturation protease	head and packaging
UniRef90	UHGV-2198834_12	UniRef90_A0A374NBM3	398.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-2198834_12	1203606.HMPREF1526_00979	184.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-2198834_12	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-2198834_12	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-2198834_12	PF00574,MF_00444,NF011091,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_13	phrog_10	152.0	4.2039e-45	major head protein	head and packaging
UniRef90	UHGV-2198834_13	UniRef90_A0A374N9V9	732.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-2198834_13	1280689.AUJC01000011_gene1521	327.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-2198834_13	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2198834_13	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2198834_13	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2198834_13	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_14	phrog_5223	54.9	0.0000000000000012	neck protein	connector
eggNOG-mapper	UHGV-2198834_14	931626.Awo_c31020	48.1	0.00000641	N/A	N/A
NCBIFam	UHGV-2198834_14	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-2198834_14	TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_15	phrog_1951	95.6	2.9e-28	head-tail adaptor	connector
UniRef90	UHGV-2198834_15	UniRef90_A0A374MZF9	182.0	0	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-2198834_15	1414720.CBYM010000040_gene1649	65.5	0.00000000000199	head-tail adaptor	N/A
COG	UHGV-2198834_15	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-2198834_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-2198834_16	UniRef90_UPI001A9B6FBF	165.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2198834_16	1414720.CBYM010000040_gene1650	130.0	4.46e-37	N/A	N/A
structural_annotation	UHGV-2198834_16	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2198834_17	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_18	phrog_885	137.8	6.40001e-41	major tail protein	tail
UniRef90	UHGV-2198834_18	UniRef90_Q894J4	162.0	0	Conserved protein	N/A
eggNOG-mapper	UHGV-2198834_18	1321814.HMPREF9089_00935	173.0	0	N/A	N/A
structural_annotation	UHGV-2198834_18	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_19	phrog_1021	49.0	0.0000000000000049	N/A	unknown function
eggNOG-mapper	UHGV-2198834_19	1321778.HMPREF1982_03556	53.5	0.000000188	N/A	N/A
PHROG	UHGV-2198834_21	phrog_23464	258.8	0	N/A	unknown function
eggNOG-mapper	UHGV-2198834_21	665950.HMPREF1025_02660	182.0	1.4013e-45	phage tail tape measure protein	N/A
COG	UHGV-2198834_21	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-2198834_21	COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-2198834_22	UniRef90_A0A1G5CPA2	120.0	1.43e-29	Phage-related protein	N/A
eggNOG-mapper	UHGV-2198834_22	1246.JMEA01000006_gene51	67.8	0.000000000119	phage tail	N/A
COG	UHGV-2198834_22	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2198834_22	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_23	phrog_1067	139.3	2.29995e-41	minor head protein	head and packaging
UniRef90	UHGV-2198834_23	UniRef90_A0A348ZBV6	179.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-2198834_23	1160721.RBI_I01574	125.0	1.65e-28	Prophage endopeptidase tail	N/A
Pfam	UHGV-2198834_23	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-2198834_23	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-2198834_23	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2198834_23	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
UniRef90	UHGV-2198834_24	UniRef90_A0A374N9Y2	321.0	0	N/A	N/A
Pfam	UHGV-2198834_24	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-2198834_24	PF10651,PF08931,TIGR02268	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_26	phrog_1863	71.5	9.5e-22	N/A	unknown function
UniRef90	UHGV-2198834_26	UniRef90_UPI001F223E8B	90.9	2.7e-22	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-2198834_26	1203606.HMPREF1526_02027	81.6	1.99e-19	N/A	N/A
PHROG	UHGV-2198834_27	phrog_443	65.9	9.7e-19	holin	lysis
UniRef90	UHGV-2198834_27	UniRef90_R6R2Q3	89.4	4.49e-22	Conserved domain protein	N/A
eggNOG-mapper	UHGV-2198834_27	1235797.C816_04172	82.4	4.29e-20	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-2198834_27	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-2198834_27	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-2198834_28	phrog_20388	110.6	1.7e-32	endolysin	lysis
UniRef90	UHGV-2198834_28	UniRef90_UPI0011AEE5FE	86.7	1.78e-20	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-2198834_28	1203606.HMPREF1526_00253	135.0	1.77e-36	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-2198834_28	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
PHROG	UHGV-2198834_29	phrog_20388	125.2	5.3e-37	endolysin	lysis
UniRef90	UHGV-2198834_29	UniRef90_A0A374N1L8	344.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-2198834_29	742733.HMPREF9469_05022	148.0	5.35002e-41	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-2198834_29	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-2198834_29	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
UniRef90	UHGV-2198834_30	UniRef90_A0A412ULX9	109.0	3.05e-30	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2198834_30	679200.HMPREF9333_02253	57.8	0.000000000132	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-2198834_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2198834_30	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-2198834_30	PF01381,NF040522,COG2944	N/A	N/A	N/A	N/A
UniRef90	UHGV-2198834_34	UniRef90_A0A2N0UVF0	316.0	0	CBM26 domain-containing protein	N/A
eggNOG-mapper	UHGV-2198834_34	33905.BTHE_1898	122.0	8.45e-32	Belongs to the glycosyl hydrolase 31 family	N/A
Pfam	UHGV-2198834_34	PF16738	N/A	N/A	Starch-binding module 26	CBM26
COG	UHGV-2198834_34	COG1501	N/A	N/A	Alpha-glucosidase/xylosidase, GH31 family	N/A
KOfam	UHGV-2198834_35	K17256	55.3	4.4e-16	IGFALS, ALS; insulin-like growth factor-binding protein complex acid labile subunit	N/A
PHROG	UHGV-2198834_35	phrog_35892	84.0	5.10073e-43	N/A	unknown function
UniRef90	UHGV-2198834_35	UniRef90_R5DSQ1	337.0	0	Ig-like domain-containing surface protein	N/A
Pfam	UHGV-2198834_35	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-2198834_35	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
KOfam	UHGV-2198834_36	K17256	59.8	1.9e-17	IGFALS, ALS; insulin-like growth factor-binding protein complex acid labile subunit	N/A
PHROG	UHGV-2198834_36	phrog_18805	79.6	1.4e-23	N/A	unknown function
UniRef90	UHGV-2198834_36	UniRef90_R5DWB5	419.0	0	Putative cell wall binding repeat-containing domain protein	N/A
eggNOG-mapper	UHGV-2198834_36	877418.ATWV01000012_gene870	55.8	0.00000527	regulation of response to stimulus	N/A
Pfam	UHGV-2198834_36	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-2198834_36	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
COG	UHGV-2198834_36	COG4886	N/A	N/A	Leucine-rich repeat (LRR) protein	N/A
PHROG	UHGV-2198834_37	phrog_3675	96.4	1.6e-28	N/A	unknown function
UniRef90	UHGV-2198834_37	UniRef90_UPI001C02868E	105.0	2.45e-27	YjcQ family protein	N/A
eggNOG-mapper	UHGV-2198834_37	1235799.C818_04221	114.0	6.12e-32	YjcQ protein	N/A
Pfam	UHGV-2198834_37	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-2198834_37	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
UniRef90	UHGV-2198834_38	UniRef90_R5DU92	1070.0	0	HisKA_7TM domain-containing protein	N/A
eggNOG-mapper	UHGV-2198834_38	411461.DORFOR_00052	257.0	0	N/A	N/A
Pfam	UHGV-2198834_38	PF16927	N/A	N/A	N-terminal 7TM region of histidine kinase	HisKA_7TM

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2198834	Yes	25,490	40	100	1
UHGV-1962435	No	19,294	42	79	1
UHGV-1925598	No	15,778	42	65	1
UHGV-1560620	No	15,216	42	62	1