vOTU vOTU-086583

vOTU: vOTU-086583

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-086583
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00213 → vGENUS-00449 → vSUBGEN-26676 → vOTU-086583
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0039521
Biosample ID	SAMEA4969178
Genome length (bp)	41,735 bps
CheckV completeness	97.76% (High-quality)
CDS count	60
CDS density	93.91%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	157	Host agreement	70.06
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.76)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0039521_1	K14059	151.9	7.00649e-45	int; integrase	N/A
PHROG	UHGV-0039521_1	phrog_1	166.2	0	integrase	integration and excision
UniRef90	UHGV-0039521_1	UniRef90_A0A8D9UGU2	645.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0039521_1	693746.OBV_41260	301.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0039521_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0039521_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0039521_1	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039521_2	UniRef90_A0A8D9UHA6	244.0	0	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0039521_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0039521_2	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039521_4	UniRef90_A0A8D9UHB1	135.0	4.06e-39	Repressor protein CI	N/A
eggNOG-mapper	UHGV-0039521_4	1378168.N510_01712	67.8	0.00000000000342	N/A	N/A
Pfam	UHGV-0039521_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0039521_4	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039521_5	UniRef90_A0A8D9PDN2	129.0	4.46e-38	DNA-binding protein	N/A
structural_annotation	UHGV-0039521_5	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0039521_6	K07741	212.5	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0039521_6	phrog_63	175.4	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0039521_6	UniRef90_UPI000466CBED	360.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0039521_6	1232443.BAIA02000079_gene53	360.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0039521_6	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0039521_6	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0039521_6	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0039521_6	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_7	phrog_3	40.8	0.000000000081	transcriptional repressor	transcription regulation
Pfam	UHGV-0039521_7	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0039521_7	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0039521_9	UniRef90_A0A8D9PDM8	132.0	5.39e-39	Pyocin activator protein	N/A
PHROG	UHGV-0039521_13	phrog_253	91.8	7.9e-27	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039521_13	UniRef90_A0A8D9PDS3	253.0	0	Resistance protein	N/A
eggNOG-mapper	UHGV-0039521_13	748224.HMPREF9436_03356	108.0	5.78e-28	Siphovirus Gp157	N/A
Pfam	UHGV-0039521_13	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0039521_13	PF05565	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_14	phrog_155	154.0	1.4013e-45	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039521_14	UniRef90_UPI00130EB09C	193.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0039521_14	97138.C820_00777	177.0	0	ERF superfamily	N/A
Pfam	UHGV-0039521_14	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0039521_14	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_15	phrog_72	46.0	0.0000000000004	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039521_15	UniRef90_A0A8D9PDS2	311.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0039521_15	445972.ANACOL_01825	129.0	2.29e-35	N/A	N/A
structural_annotation	UHGV-0039521_15	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_16	phrog_7566	90.4	1.2e-26	N/A	unknown function
UniRef90	UHGV-0039521_16	UniRef90_A0A8D9UHC0	174.0	0	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0039521_16	693746.OBV_24070	112.0	3.21e-31	N/A	N/A
structural_annotation	UHGV-0039521_17	PF12844,MF_00535,NF041951,COG5499	N/A	N/A	N/A	N/A
KOfam	UHGV-0039521_18	K03111	146.6	2.49431e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0039521_18	phrog_44	144.9	4.1058e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039521_18	UniRef90_A0A352RPR0	203.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0039521_18	1007096.BAGW01000023_gene151	201.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0039521_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0039521_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0039521_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0039521_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0039521_18	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_21	phrog_15768	44.3	0.0000000000031	N/A	unknown function
UniRef90	UHGV-0039521_21	UniRef90_UPI0019563B2C	77.8	9.75e-17	N/A	N/A
eggNOG-mapper	UHGV-0039521_21	1121344.JHZO01000003_gene982	58.9	0.00000000225	N/A	N/A
Pfam	UHGV-0039521_21	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0039521_21	PF19808	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039521_22	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_24	phrog_190	109.3	2.9e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039521_24	UniRef90_A0A8D9PDD6	260.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0039521_24	1226322.HMPREF1545_00295	119.0	2.26e-32	N/A	N/A
Pfam	UHGV-0039521_24	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0039521_24	PF06356	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039521_26	UniRef90_A0A0T7K791	63.2	0.0000000000122	DNA methylase	N/A
eggNOG-mapper	UHGV-0039521_26	718252.FP2_06750	70.5	0.0000000000000754	DNA methylase	N/A
COG	UHGV-0039521_26	COG0863	N/A	N/A	DNA modification methylase	N/A
KOfam	UHGV-0039521_29	K00558	153.2	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0039521_29	phrog_116	192.3	0	DNA methyltransferase	other
UniRef90	UHGV-0039521_29	UniRef90_D4JYK0	341.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0039521_29	718252.FP2_16350	341.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0039521_29	oMTase_00004	189.8	0	orphan methyltransferase	RM
Pfam	UHGV-0039521_29	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0039521_29	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
UniRef90	UHGV-0039521_33	UniRef90_A0A098GES5	85.5	1.12e-19	Putative phage associated protein	N/A
structural_annotation	UHGV-0039521_33	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_36	phrog_606	79.5	3.8e-23	terminase small subunit	head and packaging
UniRef90	UHGV-0039521_36	UniRef90_UPI00195648BB	191.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0039521_36	397290.C810_05185	142.0	3.36998e-41	DNA-packaging protein gp3	N/A
Pfam	UHGV-0039521_36	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
KOfam	UHGV-0039521_37	K06909	121.9	5.9e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0039521_37	phrog_979	197.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0039521_37	UniRef90_A0A8D9PDR5	959.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-0039521_37	1203606.HMPREF1526_02750	615.0	0	N/A	N/A
Pfam	UHGV-0039521_37	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0039521_37	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0039521_37	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_38	phrog_156	324.2	0	portal protein	head and packaging
UniRef90	UHGV-0039521_38	UniRef90_A0A8D9UH10	1134.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0039521_38	748224.HMPREF9436_01396	528.0	0	N/A	N/A
structural_annotation	UHGV-0039521_38	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039521_39	UniRef90_A0A8D9PDR6	169.0	0	YsxB-like protein	N/A
Pfam	UHGV-0039521_39	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0039521_39	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_40	phrog_13908	304.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0039521_40	1410650.JHWL01000003_gene2831	120.0	7.14e-29	N/A	N/A
PHROG	UHGV-0039521_41	phrog_1357	262.7	0	major head protein	head and packaging
UniRef90	UHGV-0039521_41	UniRef90_A0A8D9UH64	717.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0039521_41	1449126.JQKL01000003_gene1695	438.0	0	N/A	N/A
Pfam	UHGV-0039521_41	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0039521_41	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0039521_41	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_42	phrog_15239	88.3	3.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-0039521_42	1449126.JQKL01000003_gene1694	51.6	0.00000193	N/A	N/A
COG	UHGV-0039521_43	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
structural_annotation	UHGV-0039521_43	PF10651	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039521_45	PF03426,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_46	phrog_4105	99.9	1.5e-29	N/A	unknown function
UniRef90	UHGV-0039521_46	UniRef90_A0A8D9UHA9	169.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0039521_46	411460.RUMTOR_01326	135.0	2.93999e-40	N/A	N/A
PHROG	UHGV-0039521_47	phrog_881	90.2	1.1e-26	holin	lysis
UniRef90	UHGV-0039521_47	UniRef90_UPI00189D3A4F	85.5	1.61e-20	phage holin	N/A
eggNOG-mapper	UHGV-0039521_47	742740.HMPREF9474_02251	82.4	4.96e-20	Putative phage holin Dp-1	N/A
Pfam	UHGV-0039521_47	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0039521_47	PF16938	N/A	N/A	N/A	N/A
KOfam	UHGV-0039521_48	K01448	51.2	0.000000000000019	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0039521_48	phrog_435	72.6	6.8e-21	endolysin	lysis
UniRef90	UHGV-0039521_48	UniRef90_A0A810PUG7	199.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0039521_48	697281.Mahau_0053	105.0	1.04e-24	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0039521_48	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0039521_48	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0039521_48	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0039521_48	PF01520,PF01471,MF_00562,TIGR02883,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_49	phrog_12105	95.6	1.4e-28	N/A	unknown function
eggNOG-mapper	UHGV-0039521_49	1519439.JPJG01000060_gene1891	65.5	0.00000000000449	N/A	N/A
PHROG	UHGV-0039521_50	phrog_511	210.7	0	internal virion protein	head and packaging
UniRef90	UHGV-0039521_50	UniRef90_A0A8D9UH72	814.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-0039521_50	1226322.HMPREF1545_00785	320.0	0	N/A	N/A
structural_annotation	UHGV-0039521_50	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039521_51	UniRef90_A0A8D9UGT1	99.8	2.22e-24	Sigma C capsid protein	N/A
eggNOG-mapper	UHGV-0039521_52	1410650.JHWL01000003_gene2815	55.8	0.00000639	N/A	N/A
PHROG	UHGV-0039521_53	phrog_22978	844.1	0	N/A	unknown function
UniRef90	UHGV-0039521_53	UniRef90_A0A1Y4WLF7	1004.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0039521_53	1410650.JHWL01000003_gene2814	600.0	0	N/A	N/A
Pfam	UHGV-0039521_53	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
UniRef90	UHGV-0039521_54	UniRef90_A0A8D9PDQ3	97.1	6.88e-25	ECF sigma factor	N/A
structural_annotation	UHGV-0039521_54	PF04545,MF_00674,NF009179,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0039521_55	phrog_3754	94.5	1e-27	N/A	unknown function
eggNOG-mapper	UHGV-0039521_55	476272.RUMHYD_01764	161.0	0	N/A	N/A
PHROG	UHGV-0039521_56	phrog_21718	103.2	2.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-0039521_56	397290.C810_05210	77.8	4.46e-16	N/A	N/A
PHROG	UHGV-0039521_57	phrog_22984	79.1	4.5e-23	N/A	unknown function
PHROG	UHGV-0039521_58	phrog_16490	137.8	3.50002e-41	N/A	unknown function
eggNOG-mapper	UHGV-0039521_58	1408437.JNJN01000043_gene803	140.0	2.01e-38	N/A	N/A
PHROG	UHGV-0039521_59	phrog_20016	204.1	0	N/A	unknown function
UniRef90	UHGV-0039521_59	UniRef90_A0A285PT46	199.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0039521_59	397290.C810_05214	170.0	0	N/A	N/A
structural_annotation	UHGV-0039521_59	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039521_60	PF12510	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0039521	Yes	41,735	57	98	1