vOTU vOTU-086595

vOTU: vOTU-086595

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-086595
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-01463 → vGENUS-19518 → vSUBGEN-37816 → vOTU-086595
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1486324
Biosample ID	SAMEA2152443
Genome length (bp)	36,656 bps
CheckV completeness	90.14% (High-quality)
CDS count	49
CDS density	89.58%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Faecousia	Total connections	21	Host agreement	71.43
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 90.14)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1486324_2	UniRef90_A0A098GES5	93.2	2.56e-22	Putative phage associated protein	N/A
structural_annotation	UHGV-1486324_2	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-1486324_3	phrog_2562	161.1	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1486324_3	UniRef90_A0A3A6E2X3	246.0	0	N/A	N/A
eggNOG-mapper	UHGV-1486324_3	445971.ANASTE_00700	160.0	7.00649e-45	N/A	N/A
Pfam	UHGV-1486324_3	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-1486324_3	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1486324_3	PF14297	N/A	N/A	N/A	N/A
KOfam	UHGV-1486324_5	K03111	140.2	1.99993e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1486324_5	phrog_44	145.7	2.49431e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1486324_5	UniRef90_A0A810QFR8	191.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1486324_5	1007096.BAGW01000007_gene1922	177.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1486324_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1486324_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1486324_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1486324_5	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1486324_5	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1486324_6	phrog_7838	148.8	2.94273e-44	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1486324_6	UniRef90_A0A8D9UGW3	206.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-1486324_6	742767.HMPREF9456_02052	159.0	0	N/A	N/A
structural_annotation	UHGV-1486324_6	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1486324_10	PF19885	N/A	N/A	N/A	N/A
PHROG	UHGV-1486324_13	phrog_1468	43.0	0.0000000000015	transcriptional repressor	transcription regulation
UniRef90	UHGV-1486324_13	UniRef90_UPI001D011E8C	75.9	1.4e-16	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1486324_13	1007096.BAGW01000023_gene157	87.8	3.6e-22	N/A	N/A
structural_annotation	UHGV-1486324_13	TIGR03070	N/A	N/A	N/A	N/A
PHROG	UHGV-1486324_16	phrog_8	60.7	3.7e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1486324_16	UniRef90_UPI000B35D4B7	73.6	0.00000000000000967	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1486324_16	1378168.N510_01712	66.6	0.00000000000832	N/A	N/A
Pfam	UHGV-1486324_16	PF07022	N/A	N/A	Bacteriophage CI repressor helix-turn-helix domain	Phage_CI_repr
structural_annotation	UHGV-1486324_16	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1486324_17	phrog_8	55.2	2.3e-32	transcriptional regulator	transcription regulation
UniRef90	UHGV-1486324_17	UniRef90_UPI001D008C36	87.0	9.8e-19	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1486324_17	642492.Clole_0782	63.2	0.000000000211	addiction module antidote protein HigA	N/A
Pfam	UHGV-1486324_17	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1486324_17	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1486324_17	PF01381,PF08667,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1486324_19	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1486324_20	K14059	134.6	1.2e-39	int; integrase	N/A
PHROG	UHGV-1486324_20	phrog_1	137.8	9.40005e-41	integrase	integration and excision
UniRef90	UHGV-1486324_20	UniRef90_A0A174DBH0	277.0	0	Site-specific tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-1486324_20	411473.RUMCAL_01764	100.0	2.93e-21	Phage integrase family	N/A
Pfam	UHGV-1486324_20	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1486324_20	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1486324_20	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1486324_21	UniRef90_A0A843GWV6	76.3	6.29e-16	Rubrerythrin domain-containing protein	N/A
UniRef90	UHGV-1486324_24	UniRef90_UPI000F0512BB	84.7	1.41e-20	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1486324_24	478749.BRYFOR_07643	68.2	0.00000000000000906	N/A	N/A
structural_annotation	UHGV-1486324_24	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-1486324_26	phrog_374	206.9	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1486324_26	UniRef90_A0A380IPI2	190.0	0	AP2 domain protein	N/A
eggNOG-mapper	UHGV-1486324_26	632245.CLP_1610	170.0	0	N/A	N/A
structural_annotation	UHGV-1486324_26	PF17375	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1486324_27	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1486324_28	693746.OBV_01590	332.0	0	N/A	N/A
Pfam	UHGV-1486324_28	PF18798	N/A	N/A	Large polyvalent protein-associated domain 3	LPD3
eggNOG-mapper	UHGV-1486324_29	693746.OBV_01600	60.8	0.000000359	N/A	N/A
eggNOG-mapper	UHGV-1486324_30	1519439.JPJG01000011_gene57	114.0	1.28e-30	N/A	N/A
structural_annotation	UHGV-1486324_30	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-1486324_31	UniRef90_A0A4D7ASB8	290.0	0	N/A	N/A
eggNOG-mapper	UHGV-1486324_31	693746.OBV_01680	309.0	0	N/A	N/A
structural_annotation	UHGV-1486324_31	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
KOfam	UHGV-1486324_32	K06909	130.5	1.6e-38	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1486324_32	phrog_979	126.9	5.5e-39	terminase large subunit	head and packaging
UniRef90	UHGV-1486324_32	UniRef90_A0A6A8VHX7	563.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1486324_32	693746.OBV_01690	538.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-1486324_32	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1486324_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1486324_32	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1486324_34	phrog_4105	50.2	0.000000000000038	N/A	unknown function
KOfam	UHGV-1486324_36	K24213	54.6	0.000000000000001	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-1486324_36	phrog_5073	69.2	4.7e-20	tail fiber protein	tail
Pfam	UHGV-1486324_36	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-1486324_37	phrog_156	126.0	5.6e-40	portal protein	head and packaging
eggNOG-mapper	UHGV-1486324_37	693746.OBV_01670	582.0	0	N/A	N/A
structural_annotation	UHGV-1486324_37	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1486324_39	phrog_422	126.8	1.6e-37	major head protein	head and packaging
UniRef90	UHGV-1486324_39	UniRef90_UPI00082A3F03	250.0	0	chitobiase/beta-hexosaminidase C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1486324_39	755731.Clo1100_2434	153.0	1.87003e-41	N/A	N/A
Pfam	UHGV-1486324_39	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
structural_annotation	UHGV-1486324_39	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1486324_41	K01447	53.4	0.0000000000000048	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1486324_41	phrog_1794	133.0	2.7e-39	amidase	lysis
UniRef90	UHGV-1486324_41	UniRef90_R5AZE6	214.0	0	N-acetylmuramoyl-L-alanine amidase family 2	N/A
eggNOG-mapper	UHGV-1486324_41	1235793.C809_04649	204.0	0	Flagellar rod assembly protein muramidase FlgJ	N/A
Pfam	UHGV-1486324_41	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1486324_41	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1486324_41	PF01510,MF_04111,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1486324_42	phrog_443	64.5	2.6e-18	holin	lysis
UniRef90	UHGV-1486324_42	UniRef90_UPI001B3C9F75	54.3	0.0000000273	holin	N/A
eggNOG-mapper	UHGV-1486324_42	1469948.JPNB01000002_gene3855	49.7	0.00000032	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-1486324_42	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-1486324_42	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-1486324_45	K01160	41.7	0.000000000026	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1486324_45	phrog_140	118.1	5.9e-35	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1486324_45	UniRef90_D4N1J6	132.0	7.18e-37	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-1486324_45	545697.HMPREF0216_02819	114.0	9.16e-31	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1486324_45	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1486324_45	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1486324_45	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1486324_46	K03111	56.7	6.1e-16	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1486324_46	phrog_44	71.2	2.3e-20	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1486324_46	UniRef90_A0A645DSK7	92.8	2.4e-21	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1486324_46	411467.BACCAP_02389	92.8	5.63e-22	Single-strand binding protein family	N/A
Pfam	UHGV-1486324_46	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1486324_46	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1486324_46	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1486324_46	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
Pfam	UHGV-1486324_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1486324	Yes	36,656	58	90	1
UHGV-0056117	No	32,397	58	80	1
UHGV-0149150	No	11,160	60	27	1
UHGV-1652876	No	11,158	60	27	1