vOTU vOTU-086808

vOTU: vOTU-086808

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-086808
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00012 → vSUBFAM-00191 → vGENUS-02093 → vSUBGEN-01580 → vOTU-086808
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q symbiosum
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0102506
Biosample ID	N/A
Genome length (bp)	13,318 bps
CheckV completeness	97.50% (High-quality)
CDS count	22
CDS density	98.24%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Clostridium_Q → Clostridium_Q symbiosum	Total connections	165	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.5)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
Pfam	UHGV-0102506_4	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
KOfam	UHGV-0102506_7	K21237	63.9	5.9e-19	gp2; Podoviridae DNA polymerase [EC:2.7.7.7]	N/A
PHROG	UHGV-0102506_7	phrog_1907	202.6	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102506_7	UniRef90_A0A843GHP1	617.0	0	DNA-directed DNA polymerase	N/A
Pfam	UHGV-0102506_7	PF03175	N/A	N/A	DNA polymerase type B, organellar and viral	DNA_pol_B_2
structural_annotation	UHGV-0102506_7	PF03175,MF_04055,NF004417,COG0417	N/A	N/A	N/A	N/A
KOfam	UHGV-0102506_8	K03111	119.0	7e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0102506_8	phrog_44	116.8	2e-34	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102506_8	UniRef90_A0A1H5WWA4	138.0	1.66e-39	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0102506_8	1282887.AUJG01000016_gene1170	138.0	2.77999e-40	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0102506_8	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0102506_8	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0102506_8	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0102506_8	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0102506_8	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0102506_10	phrog_2150	105.2	6.5e-31	terminase	head and packaging
UniRef90	UHGV-0102506_10	UniRef90_A0A843GFY2	332.0	0	Phage DNA encapsidation protein	N/A
Pfam	UHGV-0102506_10	PF05894	N/A	N/A	Podovirus DNA encapsidation protein (Gp16)	Podovirus_Gp16
structural_annotation	UHGV-0102506_10	PF05894,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
COG	UHGV-0102506_12	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0102506_12	PF05382,TIGR02594,COG4322	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0102506_14	PF21703,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0102506_15	PF20934	N/A	N/A	N/A	N/A
PHROG	UHGV-0102506_16	phrog_11037	92.7	4.3e-27	N/A	unknown function
UniRef90	UHGV-0102506_16	UniRef90_A0A843HJD0	121.0	1.44e-30	Phage_lysozyme2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0102506_16	1449050.JNLE01000003_gene2104	106.0	8.11e-25	Putative peptidoglycan binding domain	N/A
Pfam	UHGV-0102506_16	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-0102506_16	COG3409	N/A	N/A	Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases	N/A
structural_annotation	UHGV-0102506_16	PF18013	N/A	N/A	N/A	N/A
PHROG	UHGV-0102506_17	phrog_2038	80.9	1.7e-23	upper collar connector	connector
UniRef90	UHGV-0102506_17	UniRef90_A0A2Z4GUB7	260.0	0	Upper collar protein	N/A
Pfam	UHGV-0102506_17	PF05352	N/A	N/A	Phage Connector (GP10)	Phage_connector
structural_annotation	UHGV-0102506_17	PF05352,TIGR01538,COG4695	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0102506_20	PF08931	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0102506	Yes	13,318	41	98	1
UHGV-1407073	No	13,252	41	97	1