vOTU vOTU-087276

vOTU: vOTU-087276

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-087276
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-03744 → vOTU-087276
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Enterocloster → Enterocloster clostridioformis
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0166956
Biosample ID	SAMN06328501
Genome length (bp)	25,736 bps
CheckV completeness	64.43% (Medium-quality)
CDS count	36
CDS density	89.27%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Enterocloster → Enterocloster clostridioformis	Total connections	2	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.43)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0166956_1	UniRef90_A0A3E3I9W3	94.7	1.1e-23	N/A	N/A
eggNOG-mapper	UHGV-0166956_1	742723.HMPREF9477_00919	49.7	0.00000451	N/A	N/A
Pfam	UHGV-0166956_1	PF04448	N/A	N/A	N/A	DUF551
KOfam	UHGV-0166956_2	K04763	193.3	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0166956_2	phrog_1	165.0	0	integrase	integration and excision
UniRef90	UHGV-0166956_2	UniRef90_A0A6N7W7P5	384.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0166956_2	545696.HOLDEFILI_00734	178.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0166956_2	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0166956_2	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0166956_2	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0166956_2	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_3	phrog_6568	79.6	2.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0166956_3	1203606.HMPREF1526_00241	63.9	0.000000000000687	N/A	N/A
PHROG	UHGV-0166956_4	phrog_36	57.9	2.3e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0166956_4	UniRef90_A0A3E3HWK1	189.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0166956_4	1235798.C817_03486	186.0	0	N/A	N/A
structural_annotation	UHGV-0166956_4	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-0166956_5	K07474	161.4	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0166956_5	phrog_51	149.4	1.68156e-44	terminase small subunit	head and packaging
UniRef90	UHGV-0166956_5	UniRef90_R5FKE8	257.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0166956_5	742740.HMPREF9474_03499	250.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-0166956_5	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0166956_5	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0166956_5	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0166956_6	K06909	83.1	3.7e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0166956_6	phrog_2	66.2	7.2e-19	terminase large subunit	head and packaging
UniRef90	UHGV-0166956_6	UniRef90_A0A1I0K8E3	811.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0166956_6	742740.HMPREF9474_03500	795.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0166956_6	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0166956_6	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_7	phrog_533	284.1	0	portal protein	head and packaging
UniRef90	UHGV-0166956_7	UniRef90_A0A1C7G7K7	778.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0166956_7	742740.HMPREF9474_03501	738.0	0	N/A	N/A
structural_annotation	UHGV-0166956_7	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_8	phrog_581	324.0	0	minor head protein	head and packaging
UniRef90	UHGV-0166956_8	UniRef90_A0A4R4FGP8	507.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0166956_8	195103.CPF_0952	395.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0166956_8	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0166956_8	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0166956_8	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_9	phrog_2303	147.0	1.30321e-43	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0166956_9	742740.HMPREF9474_03504	220.0	0	N/A	N/A
PHROG	UHGV-0166956_10	phrog_422	340.9	0	major head protein	head and packaging
UniRef90	UHGV-0166956_10	UniRef90_E7GRG0	545.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0166956_10	742740.HMPREF9474_03505	545.0	0	N/A	N/A
structural_annotation	UHGV-0166956_10	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_11	phrog_1378	83.6	1.6e-24	N/A	unknown function
eggNOG-mapper	UHGV-0166956_11	1280692.AUJL01000027_gene2159	79.3	2.34e-18	N/A	N/A
PHROG	UHGV-0166956_12	phrog_541	88.7	5.7e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0166956_12	1298920.KI911353_gene4848	218.0	0	N/A	N/A
PHROG	UHGV-0166956_13	phrog_8710	150.5	4.2039e-45	N/A	unknown function
eggNOG-mapper	UHGV-0166956_13	1304866.K413DRAFT_0782	148.0	7.00649e-45	N/A	N/A
structural_annotation	UHGV-0166956_13	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_14	phrog_556	63.2	4.1e-18	minor head protein	head and packaging
UniRef90	UHGV-0166956_14	UniRef90_UPI0013589085	152.0	1.4013e-45	minor capsid protein	N/A
eggNOG-mapper	UHGV-0166956_14	1294142.CINTURNW_1033	156.0	0	N/A	N/A
PHROG	UHGV-0166956_15	phrog_2595	90.1	2.2e-26	head-tail connector protein	connector
UniRef90	UHGV-0166956_15	UniRef90_UPI0011CC909E	195.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0166956_15	1298920.KI911353_gene4845	177.0	0	N/A	N/A
Pfam	UHGV-0166956_15	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0166956_15	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_16	phrog_820	130.6	7.1e-39	major tail protein	tail
eggNOG-mapper	UHGV-0166956_16	1280692.AUJL01000027_gene2154	230.0	0	domain, Protein	N/A
COG	UHGV-0166956_16	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0166956_16	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_17	phrog_8300	90.9	9.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0166956_17	1298920.KI911353_gene4843	102.0	1.46e-26	N/A	N/A
structural_annotation	UHGV-0166956_17	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_18	phrog_8355	105.8	1.4e-31	N/A	unknown function
UniRef90	UHGV-0166956_18	UniRef90_A0A0L8EZ98	117.0	1.93e-32	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0166956_18	1304866.K413DRAFT_0777	116.0	5.01e-33	Bacteriophage Gp15 protein	N/A
PHROG	UHGV-0166956_19	phrog_1535	558.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0166956_19	UniRef90_UPI0003F4F1A1	282.0	0	membrane protein	N/A
eggNOG-mapper	UHGV-0166956_19	1158607.UAU_01770	336.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-0166956_19	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_20	phrog_1194	76.4	3.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0166956_20	33035.JPJF01000093_gene2242	174.0	0	N/A	N/A
structural_annotation	UHGV-0166956_20	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_21	phrog_6616	589.1	0	tail protein	tail
UniRef90	UHGV-0166956_21	UniRef90_A0A0J1FXD9	419.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0166956_21	476272.RUMHYD_01992	446.0	0	N/A	N/A
structural_annotation	UHGV-0166956_21	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-0166956_22	K24213	82.6	3.9e-24	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0166956_22	phrog_366	75.0	1.4e-21	tail fiber protein	tail
UniRef90	UHGV-0166956_22	UniRef90_UPI001D4670E9	85.1	3.34e-16	collagen-like protein	N/A
eggNOG-mapper	UHGV-0166956_22	1121866.AUGK01000003_gene1445	80.9	0.00000000000000681	N/A	N/A
Pfam	UHGV-0166956_22	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
KOfam	UHGV-0166956_23	K24213	81.1	1.2e-23	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-0166956_23	phrog_6320	104.4	1.3e-30	tail fiber protein	tail
Pfam	UHGV-0166956_23	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
eggNOG-mapper	UHGV-0166956_24	742740.HMPREF9474_04291	110.0	2.24e-29	N/A	N/A
NCBIFam	UHGV-0166956_25	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0166956_25	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0166956_26	phrog_1863	50.9	0.0000000000000026	N/A	unknown function
eggNOG-mapper	UHGV-0166956_26	1226322.HMPREF1545_04027	70.1	0.00000000000000939	N/A	N/A
PHROG	UHGV-0166956_27	phrog_18218	132.9	9.79999e-40	N/A	unknown function
UniRef90	UHGV-0166956_27	UniRef90_A0A8D9PGR5	145.0	2.41023e-43	Holin	N/A
eggNOG-mapper	UHGV-0166956_27	411902.CLOBOL_03424	74.3	8.14e-16	N/A	N/A
structural_annotation	UHGV-0166956_27	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0166956_28	K00571	186.7	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0166956_28	phrog_67	156.0	0	DNA methyltransferase	other
UniRef90	UHGV-0166956_28	UniRef90_U2UP37	335.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0166956_28	1321782.HMPREF1986_02265	335.0	0	N-4 methylation of cytosine	N/A
PADLOC	UHGV-0166956_28	MTase_II_00107	177.6	0	Type II methyltransferase	RM
Pfam	UHGV-0166956_28	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0166956_28	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0166956_28	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0166956_29	K07273	166.1	0	acm; lysozyme	N/A
PHROG	UHGV-0166956_29	phrog_6745	121.4	9e-36	endolysin	lysis
UniRef90	UHGV-0166956_29	UniRef90_A0A1C5ZRX7	289.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0166956_29	658086.HMPREF0994_03328	226.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0166956_29	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0166956_29	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0166956_29	PF01183,NF007360,COG3757	N/A	N/A	N/A	N/A
UniRef90	UHGV-0166956_32	UniRef90_U2CXQ8	134.0	9.29001e-40	Toxin-antitoxin system, antitoxin component, Xre family	N/A
eggNOG-mapper	UHGV-0166956_32	203119.Cthe_1750	58.5	0.000000000145	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0166956_32	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0166956_32	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0166956_33	cluster_13845	28.5	0.000811	NA	N/A
UniRef90	UHGV-0166956_34	UniRef90_A0A3E2WJE7	181.0	0	ParB domain-containing protein	N/A
UniRef90	UHGV-0166956_35	UniRef90_A0A1C7I464	186.0	0	AP2/ERF domain-containing protein	N/A
eggNOG-mapper	UHGV-0166956_35	742738.HMPREF9460_00886	96.7	2.43e-23	N/A	N/A
structural_annotation	UHGV-0166956_35	PF00847,TIGR03826	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0166956	Yes	25,736	48	64	1