vOTU vOTU-087496

vOTU: vOTU-087496

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-087496
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00087 → vOTU-087496
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Fournierella
Host range breadth	Genus
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0383633
Biosample ID	N/A
Genome length (bp)	34,618 bps
CheckV completeness	89.70% (Medium-quality)
CDS count	43
CDS density	94.03%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Fournierella	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_G	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 89.7)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0383633_1	K07729	46.0	0.00000000000063	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0383633_1	phrog_1373	41.4	0.000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-0383633_1	UniRef90_U2R0P8	109.0	2.92e-27	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0383633_1	1226322.HMPREF1545_02890	109.0	4.9e-28	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0383633_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0383633_1	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0383633_3	phrog_3584	160.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0383633_3	UniRef90_I2E8X7	89.4	1.21e-17	Gp31	N/A
eggNOG-mapper	UHGV-0383633_3	1415775.U729_1544	88.2	8.75e-18	N/A	N/A
structural_annotation	UHGV-0383633_3	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0383633_9	phrog_15609	122.5	4.4e-37	N/A	unknown function
eggNOG-mapper	UHGV-0383633_9	1514668.JOOA01000001_gene225	72.8	0.0000000000177	N/A	N/A
structural_annotation	UHGV-0383633_9	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0383633_10	phrog_8470	265.3	0	N/A	unknown function
UniRef90	UHGV-0383633_10	UniRef90_A0A4R2LZY1	160.0	3.06e-38	PcfJ-like protein	N/A
eggNOG-mapper	UHGV-0383633_10	742740.HMPREF9474_03121	118.0	1.1e-24	PcfJ-like protein	N/A
Pfam	UHGV-0383633_10	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0383633_10	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0383633_11	phrog_36399	92.6	4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0383633_11	1007096.BAGW01000031_gene116	89.4	2e-21	N/A	N/A
PHROG	UHGV-0383633_17	phrog_7566	87.1	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0383633_17	693746.OBV_24070	91.3	2.65e-22	N/A	N/A
KOfam	UHGV-0383633_19	K22300	49.2	0.0000000000001	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0383633_19	UniRef90_UPI0013DE7A28	137.0	2.4e-39	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0383633_19	755731.Clo1100_1415	107.0	2.43e-28	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0383633_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0383633_19	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0383633_19	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0383633_21	UniRef90_A0A645EAE7	100.0	9.37e-25	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0383633_21	718252.FP2_04820	67.4	0.000000000000615	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0383633_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0383633_21	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
KOfam	UHGV-0383633_23	K06400	330.0	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0383633_23	phrog_95	304.7	0	integrase	integration and excision
UniRef90	UHGV-0383633_23	UniRef90_UPI001C037A90	276.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-0383633_23	718252.FP2_29980	256.0	0	N/A	N/A
Pfam	UHGV-0383633_23	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0383633_23	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0383633_23	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0383633_23	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0383633_23	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0383633_24	1519439.JPJG01000060_gene1905	334.0	0	N/A	N/A
PHROG	UHGV-0383633_26	phrog_1129	66.5	2.9e-19	holin	lysis
UniRef90	UHGV-0383633_26	UniRef90_A0A4V2QA35	162.0	0	Holin family Hol44 protein (Superfamily V)	N/A
eggNOG-mapper	UHGV-0383633_26	1007096.BAGW01000036_gene2663	110.0	9.47e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0383633_26	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0383633_26	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0383633_27	33035.JPJF01000090_gene94	73.6	9.49e-16	N/A	N/A
PHROG	UHGV-0383633_28	phrog_918	120.8	3.7e-36	N/A	unknown function
UniRef90	UHGV-0383633_28	UniRef90_UPI000F4ECE86	121.0	3.48e-34	N/A	N/A
eggNOG-mapper	UHGV-0383633_28	1504823.CCMM01000008_gene1021	119.0	5.23e-34	N/A	N/A
Pfam	UHGV-0383633_28	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0383633_28	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0383633_29	phrog_2428	146.8	5.1848e-44	N/A	unknown function
UniRef90	UHGV-0383633_29	UniRef90_UPI0019D0F68F	170.0	0	ABC transporter ATPase	N/A
eggNOG-mapper	UHGV-0383633_29	1009370.ALO_12376	165.0	0	N/A	N/A
dbAPIS	UHGV-0383633_29	APIS024	N/A	N/A	Tad1 proteins are not an enzymes, but are 'sponges' that bind and sequester the immune signaling molecule (cyclic ADP-ribose or gcADPR) produced by TIR-domain proteins, thus decoupling phage sensing from immune effector activation and rendering Thoeris inactive.	N/A
KOfam	UHGV-0383633_30	K07273	176.2	0	acm; lysozyme	N/A
PHROG	UHGV-0383633_30	phrog_291	146.7	1.69557e-43	endolysin	lysis
UniRef90	UHGV-0383633_30	UniRef90_A0A4R1QM33	278.0	0	GH25 family lysozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
eggNOG-mapper	UHGV-0383633_30	537013.CLOSTMETH_01756	207.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0383633_30	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0383633_30	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0383633_30	PF01183,PF05194,COG3757	N/A	N/A	N/A	N/A
KOfam	UHGV-0383633_32	K06823	52.2	0.0000000000000026	COL18A; collagen type XVIII alpha	N/A
PHROG	UHGV-0383633_32	phrog_819	54.2	0.0000000000000012	tail protein	tail
eggNOG-mapper	UHGV-0383633_32	877414.ATWA01000019_gene2051	73.9	0.00000000000993	N/A	N/A
Pfam	UHGV-0383633_32	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0383633_33	PF07100,COG4288	N/A	N/A	N/A	N/A
PHROG	UHGV-0383633_34	phrog_267	101.7	7.5e-30	major head protein	head and packaging
UniRef90	UHGV-0383633_34	UniRef90_A0A7C6CNA9	167.0	0	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0383633_34	665956.HMPREF1032_03906	335.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-0383633_34	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0383633_37	phrog_156	100.6	1.9e-31	portal protein	head and packaging
eggNOG-mapper	UHGV-0383633_37	665956.HMPREF1032_03886	636.0	0	N/A	N/A
structural_annotation	UHGV-0383633_37	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0383633_38	phrog_3287	153.8	1.4013e-45	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0383633_38	665956.HMPREF1032_03917	827.0	0	N/A	N/A
structural_annotation	UHGV-0383633_38	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0383633_39	PF20387	N/A	N/A	N/A	N/A
KOfam	UHGV-0383633_41	K06909	124.2	1.3e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0383633_41	phrog_979	172.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0383633_41	UniRef90_UPI00195E46FA	635.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0383633_41	1408437.JNJN01000002_gene1397	456.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0383633_41	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0383633_41	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0383633_41	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0383633_42	UniRef90_UPI00195E9406	211.0	0	transposase	N/A
Pfam	UHGV-0383633_42	PF01527	N/A	N/A	Transposase	HTH_Tnp_1
structural_annotation	UHGV-0383633_43	PF03869,NF010256	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0383633	Yes	34,618	55	90	1