vOTU vOTU-087677

vOTU: vOTU-087677

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-087677
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00017 → vSUBFAM-00816 → vGENUS-01460 → vOTU-087677
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0030526
Biosample ID	SAMEA4765722
Genome length (bp)	39,190 bps
CheckV completeness	67.58% (Medium-quality)
CDS count	48
CDS density	96.94%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	3	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 67.58)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0030526_2	phrog_6918	45.7	0.0000000000009	holin	lysis
Pfam	UHGV-0030526_2	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0030526_2	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-0030526_3	phrog_4259	59.3	5.9e-17	N/A	unknown function
eggNOG-mapper	UHGV-0030526_3	742733.HMPREF9469_05037	58.9	0.000000000902	N/A	N/A
PHROG	UHGV-0030526_4	phrog_4321	145.0	1.79366e-43	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0030526_4	UniRef90_X4YEE5	137.0	5.32e-39	Homing endonuclease	N/A
eggNOG-mapper	UHGV-0030526_4	665956.HMPREF1032_00668	98.2	2.55e-24	N/A	N/A
PHROG	UHGV-0030526_5	phrog_4247	61.8	8.4e-18	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0030526_5	478749.BRYFOR_08528	58.5	0.00000000175	N/A	N/A
PHROG	UHGV-0030526_6	phrog_19428	54.5	0.0000000000000023	N/A	unknown function
PHROG	UHGV-0030526_7	phrog_9	257.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0030526_7	UniRef90_A0A5C7M263	766.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0030526_7	691965.D4P7C5_9CAUD	756.0	0	Phage Terminase	N/A
Pfam	UHGV-0030526_7	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0030526_7	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
structural_annotation	UHGV-0030526_7	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0030526_8	phrog_12	114.8	4e-34	portal protein	head and packaging
UniRef90	UHGV-0030526_8	UniRef90_UPI001C27D37B	335.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0030526_8	742740.HMPREF9474_02271	331.0	0	Phage portal protein	N/A
Pfam	UHGV-0030526_8	PF04860	N/A	N/A	Phage portal protein	Phage_portal
structural_annotation	UHGV-0030526_8	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0030526_9	K06904	76.8	2e-22	N/A	N/A
PHROG	UHGV-0030526_9	phrog_3270	547.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0030526_9	UniRef90_A0A6G5Y7H0	400.0	0	BIG2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0030526_9	1476888.X4YUP1_9CAUD	370.0	0	peptidase activity	N/A
Pfam	UHGV-0030526_9	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
structural_annotation	UHGV-0030526_9	PF04586,PF06673,TIGR01543,TIGR01554,COG3740,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0030526_10	phrog_4270	89.4	2.5e-26	N/A	unknown function
eggNOG-mapper	UHGV-0030526_10	742740.HMPREF9474_02268	80.1	7.56e-18	N/A	N/A
UniRef90	UHGV-0030526_11	UniRef90_A0A6M3SVH0	62.4	0.000000000244	Tail terminator	N/A
eggNOG-mapper	UHGV-0030526_11	478749.BRYFOR_08519	70.9	0.0000000000000173	N/A	N/A
structural_annotation	UHGV-0030526_11	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0030526_12	phrog_2645	307.0	0	major tail protein	tail
UniRef90	UHGV-0030526_12	UniRef90_A0A7X7CG90	234.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0030526_12	742740.HMPREF9474_02267	224.0	0	N/A	N/A
structural_annotation	UHGV-0030526_12	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0030526_13	phrog_4282	120.4	1.3e-35	N/A	unknown function
eggNOG-mapper	UHGV-0030526_13	742733.HMPREF9469_05024	67.8	0.00000000000136	N/A	N/A
PHROG	UHGV-0030526_14	phrog_4338	131.2	4.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-0030526_14	1537917.JU82_06570	78.6	0.00000000000000118	N/A	N/A
PHROG	UHGV-0030526_15	phrog_7502	79.2	4.1e-26	N/A	unknown function
PHROG	UHGV-0030526_16	phrog_5	49.2	0.00000000000013	tail completion or Neck1 protein	connector
UniRef90	UHGV-0030526_16	UniRef90_UPI000659DD5E	105.0	6.34e-27	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0030526_16	478749.BRYFOR_08514	94.7	1.85e-23	N/A	N/A
Pfam	UHGV-0030526_16	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0030526_16	PF17395,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0030526_17	phrog_4372	400.9	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0030526_17	665950.HMPREF1025_02007	295.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0030526_17	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0030526_17	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0030526_17	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0030526_18	phrog_33	63.0	6.8e-18	distal tail protein Dit	tail
UniRef90	UHGV-0030526_18	UniRef90_A0A1L5FA70	84.0	9.83e-16	Phage tail protein	N/A
eggNOG-mapper	UHGV-0030526_18	1201292.DR75_1502	75.9	0.000000000000174	phage tail	N/A
COG	UHGV-0030526_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0030526_18	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0030526_19	phrog_1330	260.2	0	tail protein	tail
eggNOG-mapper	UHGV-0030526_19	1329250.WOSG25_220020	220.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0030526_19	PF07902	N/A	N/A	gp58-like protein	Gp58
NCBIFam	UHGV-0030526_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0030526_19	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0030526_19	PF14594,PF00629,PF10528,TIGR01665,NF033675,NF038393,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0030526_21	phrog_1554	142.7	8.50588e-43	N/A	unknown function
UniRef90	UHGV-0030526_21	UniRef90_A0A7X2X378	127.0	2.92e-33	N/A	N/A
eggNOG-mapper	UHGV-0030526_21	1035189.HMPREF9954_1920	104.0	4.64e-25	N/A	N/A
Pfam	UHGV-0030526_21	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-0030526_21	PF07104	N/A	N/A	N/A	N/A
KOfam	UHGV-0030526_22	K13884	74.7	1.2e-21	MARCO; macrophage receptor with collagenous structure	N/A
PHROG	UHGV-0030526_22	phrog_21909	199.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0030526_22	999425.HMPREF9186_02055	193.0	0	N/A	N/A
Pfam	UHGV-0030526_22	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0030526_25	phrog_998	204.8	0	endolysin	lysis
UniRef90	UHGV-0030526_25	UniRef90_A0A4D6AB26	300.0	0	Lysin	N/A
eggNOG-mapper	UHGV-0030526_25	873448.STRPO_0302	278.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-0030526_25	PF05382	N/A	N/A	Bacteriophage peptidoglycan hydrolase	Amidase_5
COG	UHGV-0030526_25	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0030526_25	PF05382,PF18341,NF033742,COG0791,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0030526_27	phrog_7502	42.0	0.000000000014	N/A	unknown function
structural_annotation	UHGV-0030526_29	PF17376	N/A	N/A	N/A	N/A
PHROG	UHGV-0030526_30	phrog_1494	61.7	1e-17	N/A	unknown function
UniRef90	UHGV-0030526_48	UniRef90_A0A448A8K6	212.0	0	Lpxtg cell wall surface protein, collagen binding domain protein	N/A
eggNOG-mapper	UHGV-0030526_48	638301.HMPREF0444_1918	143.0	3.32e-36	Collagen binding domain	N/A
Pfam	UHGV-0030526_48	PF17961	N/A	N/A	Bacterial Ig domain	Big_8
Pfam	UHGV-0030526_48	PF05737	N/A	N/A	Collagen binding domain	Collagen_bind
COG	UHGV-0030526_48	COG4932	N/A	N/A	Clumping factor A-related surface protein, MSCRAMM (microbial surface components recognizing adhesive matrix molecules) family, DEv-IgG fold	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0030526	Yes	39,190	40	68	1