vOTU vOTU-087884

vOTU: vOTU-087884

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-087884
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Bariatricus → Bariatricus comes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00146 → vGENUS-00810 → vOTU-087884
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Bariatricus → Bariatricus comes
Host range breadth	Species
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0045474
Biosample ID	SAMEA2042836
Genome length (bp)	19,321 bps
CheckV completeness	54.84% (Medium-quality)
CDS count	28
CDS density	94.30%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Bariatricus → Bariatricus comes	Total connections	28	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Bariatricus → Bariatricus comes	Total connections	11	Host agreement	81.82

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 54.84)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0045474_1	phrog_1382	65.7	3.3e-19	N/A	unknown function
eggNOG-mapper	UHGV-0045474_1	411461.DORFOR_00727	88.6	2.69e-22	N/A	N/A
PHROG	UHGV-0045474_2	phrog_12931	99.4	2.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-0045474_2	411461.DORFOR_00728	126.0	7.42e-36	N/A	N/A
KOfam	UHGV-0045474_4	K03733	202.4	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-0045474_4	phrog_1	160.0	0	integrase	integration and excision
UniRef90	UHGV-0045474_4	UniRef90_A0A174ILR0	620.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-0045474_4	411468.CLOSCI_02414	482.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0045474_4	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-0045474_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0045474_4	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0045474_4	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0045474_7	phrog_14030	158.0	0	N/A	unknown function
UniRef90	UHGV-0045474_7	UniRef90_UPI0018999D57	570.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-0045474_7	33035.JPJF01000093_gene2240	348.0	0	NlpC/P60 family	N/A
Pfam	UHGV-0045474_7	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0045474_7	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-0045474_7	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0045474_7	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0045474_8	phrog_13289	424.6	0	tail protein	tail
UniRef90	UHGV-0045474_8	UniRef90_UPI001570BE36	1119.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0045474_8	1235798.C817_02568	464.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0045474_8	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0045474_8	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0045474_8	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-0045474_8	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0045474_9	phrog_33	65.0	2e-18	distal tail protein Dit	tail
UniRef90	UHGV-0045474_9	UniRef90_UPI001570C170	400.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0045474_9	1235798.C817_02569	203.0	0	tail component	N/A
COG	UHGV-0045474_9	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0045474_9	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0045474_10	phrog_1272	205.6	0	tail length tape measure protein	tail
UniRef90	UHGV-0045474_10	UniRef90_UPI0006C3C180	959.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0045474_10	1035184.HMPREF1042_1328	336.0	0	Phage tail tape measure protein	N/A
Pfam	UHGV-0045474_10	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0045474_10	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0045474_10	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0045474_13	phrog_88	98.2	8.7e-29	major tail protein	tail
UniRef90	UHGV-0045474_13	UniRef90_UPI0006C1EB28	345.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0045474_13	1033737.CAEV01000029_gene288	58.5	0.0000000545	N/A	N/A
Pfam	UHGV-0045474_13	PF04630	N/A	N/A	Phage tail tube protein	Phage_TTP_1
NCBIFam	UHGV-0045474_13	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0045474_13	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0045474_14	phrog_5	56.4	9.2e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-0045474_14	UniRef90_D4M595	186.0	0	Phage protein, HK97 gp10 family	N/A
structural_annotation	UHGV-0045474_14	TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0045474_15	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0045474_16	UniRef90_UPI00189B1559	234.0	0	phage head closure protein	N/A
NCBIFam	UHGV-0045474_16	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0045474_16	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0045474_18	phrog_10	80.4	1.3e-23	major head protein	head and packaging
UniRef90	UHGV-0045474_18	UniRef90_UPI00156F222D	726.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0045474_18	1232452.BAIB02000007_gene1625	466.0	0	Phage capsid family	N/A
Pfam	UHGV-0045474_18	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0045474_18	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0045474_18	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0045474_18	PF05065,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0045474_19	K01358	161.4	0	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0045474_19	phrog_94	237.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0045474_19	UniRef90_UPI00156EEE56	483.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0045474_19	1232452.BAIB02000007_gene1626	271.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0045474_19	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0045474_19	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0045474_19	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0045474_20	phrog_12	65.0	7.9e-19	portal protein	head and packaging
UniRef90	UHGV-0045474_20	UniRef90_UPI00156D5DC9	632.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0045474_20	1232452.BAIB02000007_gene1627	286.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0045474_20	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0045474_20	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0045474_20	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0045474_21	phrog_9	257.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0045474_21	UniRef90_D4M588	1079.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0045474_21	1232452.BAIB02000007_gene1629	536.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0045474_21	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0045474_21	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0045474_21	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0045474_21	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0045474_22	phrog_5110	94.6	6.5e-28	terminase small subunit	head and packaging
UniRef90	UHGV-0045474_22	UniRef90_A0A1C5LZF0	99.4	1.15e-24	Phage terminase, small subunit	N/A
eggNOG-mapper	UHGV-0045474_22	349161.Dred_2608	72.4	0.00000000000000377	N/A	N/A
Pfam	UHGV-0045474_22	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0045474_22	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0045474_24	K07451	46.7	0.00000000000068	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0045474_24	phrog_119	62.1	9.2e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0045474_24	UniRef90_UPI00156F1D4A	191.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0045474_24	1232452.BAIB02000007_gene1631	81.6	6.19e-19	HNH nucleases	N/A
Pfam	UHGV-0045474_24	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0045474_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0045474_25	phrog_36	84.8	1.2e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0045474_25	UniRef90_A0A1C6IW44	119.0	5.56e-32	RNA polymerase sigma-70 factor, Planctomycetaceae-specific subfamily 1	N/A
eggNOG-mapper	UHGV-0045474_25	1235800.C819_02243	94.4	8.9e-23	N/A	N/A
structural_annotation	UHGV-0045474_25	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-0045474_26	phrog_6568	62.8	4.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-0045474_26	1203606.HMPREF1526_00241	50.8	0.000000392	N/A	N/A
PHROG	UHGV-0045474_27	phrog_15198	63.4	4.4e-18	N/A	unknown function
UniRef90	UHGV-0045474_27	UniRef90_A0A174HIL1	155.0	0	N/A	N/A
eggNOG-mapper	UHGV-0045474_27	658655.HMPREF0988_00863	48.9	0.00000689	N/A	N/A
Pfam	UHGV-0045474_27	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0045474_28	phrog_8684	70.7	2.2e-20	N/A	unknown function
UniRef90	UHGV-0045474_28	UniRef90_A0A414U8H8	277.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0045474_28	476272.RUMHYD_03337	56.2	0.0000000375	N/A	N/A
Pfam	UHGV-0045474_28	PF09643	N/A	N/A	YopX protein	YopX

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0045474	Yes	19,321	41	55	1