vOTU vOTU-088147

vOTU: vOTU-088147

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-088147
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A
Taxonomy (UHGV)	vFAM-00052 → vSUBFAM-03130 → vGENUS-04311 → vOTU-088147
Host lineage	Bacteria → Firmicutes_A → Clostridia → Tissierellales → Peptoniphilaceae → Finegoldia
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1493072
Biosample ID	SAMN04126129
Genome length (bp)	25,594 bps
CheckV completeness	64.62% (Medium-quality)
CDS count	27
CDS density	92.03%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Tissierellales → Peptoniphilaceae → Finegoldia	Total connections	8	Host agreement	87.5
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	2	Host agreement	50

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1493072_1	phrog_374	64.2	3e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493072_1	UniRef90_A0A6I2QM54	233.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-1493072_1	887929.HMP0721_2409	109.0	7.38e-27	N/A	N/A
PHROG	UHGV-1493072_2	phrog_1299	60.9	1.4e-17	holin	lysis
UniRef90	UHGV-1493072_2	UniRef90_UPI0012439F31	49.3	0.00000727	holin	N/A
Pfam	UHGV-1493072_2	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1493072_2	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-1493072_3	K01448	113.0	3e-33	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1493072_3	phrog_435	124.5	9.4e-37	endolysin	lysis
UniRef90	UHGV-1493072_3	UniRef90_A0A233VXT5	577.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1493072_3	1033744.CAEL01000029_gene1266	183.0	0	Cell wall hydrolase autolysin	N/A
Pfam	UHGV-1493072_3	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1493072_3	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1493072_3	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1493072_6	phrog_17134	62.4	3.4e-22	N/A	unknown function
Pfam	UHGV-1493072_6	PF12789	N/A	N/A	Phage tail repeat like	PTR
structural_annotation	UHGV-1493072_6	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-1493072_10	K13582	40.5	0.000000000021	podJ; localization factor PodJL	N/A
PHROG	UHGV-1493072_10	phrog_1330	98.7	2.3e-37	tail protein	tail
eggNOG-mapper	UHGV-1493072_10	1408438.JADD01000021_gene420	87.0	0.0000000000000133	Phage minor structural protein	N/A
COG	UHGV-1493072_10	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1493072_11	phrog_33	71.7	1.5e-20	distal tail protein Dit	tail
UniRef90	UHGV-1493072_11	UniRef90_A8U7X9	176.0	0	Prophage LambdaSa04, tail protein, putative	N/A
eggNOG-mapper	UHGV-1493072_11	592010.GCWU000182_001495	122.0	2.75e-31	N/A	N/A
structural_annotation	UHGV-1493072_11	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-1493072_12	K20478	44.0	0.00000000000035	GOLGB1; golgin subfamily B member 1	N/A
PHROG	UHGV-1493072_12	phrog_1293	522.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1493072_12	UniRef90_A0A233W5U9	1978.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1493072_12	592010.GCWU000182_001494	478.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-1493072_12	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1493072_12	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1493072_12	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1493072_12	PF10145,PF05384,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1493072_13	phrog_16464	85.6	5.8e-25	N/A	unknown function
PHROG	UHGV-1493072_14	phrog_88	50.9	0.000000000000025	major tail protein	tail
UniRef90	UHGV-1493072_14	UniRef90_UPI00101D6026	182.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1493072_14	1408438.JADD01000021_gene415	267.0	0	N/A	N/A
structural_annotation	UHGV-1493072_14	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-1493072_15	UniRef90_W1Q5X5	148.0	3.40516e-43	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1493072_15	592010.GCWU000182_001490	148.0	5.74532e-44	N/A	N/A
structural_annotation	UHGV-1493072_15	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1493072_16	phrog_15828	58.3	1.3e-16	N/A	unknown function
structural_annotation	UHGV-1493072_16	PF06141	N/A	N/A	N/A	N/A
UniRef90	UHGV-1493072_17	UniRef90_UPI0004B234D6	94.4	9.8e-23	phage head closure protein	N/A
eggNOG-mapper	UHGV-1493072_17	1408438.JADD01000021_gene412	94.4	1.64e-23	N/A	N/A
structural_annotation	UHGV-1493072_17	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1493072_18	phrog_749	80.8	1.1e-23	N/A	unknown function
UniRef90	UHGV-1493072_18	UniRef90_UPI0005564806	64.3	0.0000000000184	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1493072_18	592010.GCWU000182_001487	70.1	0.000000000000015	N/A	N/A
PHROG	UHGV-1493072_19	phrog_10	92.5	5.1e-27	major head protein	head and packaging
UniRef90	UHGV-1493072_19	UniRef90_A0A233W5Q9	744.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1493072_19	565653.EGBG_01970	462.0	0	Phage capsid family	N/A
Pfam	UHGV-1493072_19	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1493072_19	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1493072_19	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1493072_19	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-1493072_20	K01358	143.2	2.40042e-42	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1493072_20	phrog_94	210.7	0	head maturation protease	head and packaging
UniRef90	UHGV-1493072_20	UniRef90_A0A233W5S0	439.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1493072_20	592010.GCWU000182_001485	193.0	0	Clp protease	N/A
Pfam	UHGV-1493072_20	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1493072_20	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1493072_20	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1493072_21	phrog_12	87.0	1.7e-25	portal protein	head and packaging
UniRef90	UHGV-1493072_21	UniRef90_W1Q2L9	317.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1493072_21	592010.GCWU000182_001484	317.0	0	Phage portal protein	N/A
Pfam	UHGV-1493072_21	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1493072_21	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1493072_21	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-1493072_22	phrog_9	315.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-1493072_22	UniRef90_UPI0004806741	667.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1493072_22	1408438.JADD01000021_gene407	667.0	0	Phage Terminase	N/A
Pfam	UHGV-1493072_22	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1493072_22	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1493072_22	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1493072_22	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1493072_23	phrog_2343	97.4	6.5e-29	terminase small subunit	head and packaging
UniRef90	UHGV-1493072_23	UniRef90_UPI0004ACBBBB	87.4	2.23e-20	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-1493072_23	1408438.JADD01000021_gene406	87.4	5.04e-21	N/A	N/A
Pfam	UHGV-1493072_23	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1493072_23	PF05119,TIGR01558	N/A	N/A	N/A	N/A
UniRef90	UHGV-1493072_24	UniRef90_A0A1H2YK04	212.0	0	Adenine-specific methyltransferase EcoRI	N/A
eggNOG-mapper	UHGV-1493072_24	641143.HMPREF9331_02194	212.0	0	N/A	N/A
PADLOC	UHGV-1493072_24	MTase_II_00083	142.5	0	Type II methyltransferase	RM
Pfam	UHGV-1493072_24	PF13651	N/A	N/A	Adenine-specific methyltransferase EcoRI	EcoRI_methylase
structural_annotation	UHGV-1493072_24	PF13651,MF_00607,NF012222,COG2263	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1493072	Yes	25,594	32	65	1