vOTU vOTU-088697

vOTU: vOTU-088697

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-088697
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-01674 → vGENUS-11823 → vOTU-088697
Host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → UBA11524 → UBA11524 sp000437595
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0009943
Biosample ID	SAMEA4765921
Genome length (bp)	23,692 bps
CheckV completeness	58.36% (Medium-quality)
CDS count	30
CDS density	93.17%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → UBA11524 → UBA11524 sp000437595	Total connections	64	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Christensenellales → CAG-74 → UBA11524 → UBA11524 sp000437595	Total connections	25	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0009943_2	phrog_64	285.8	0	portal protein	head and packaging
UniRef90	UHGV-0009943_2	UniRef90_A0A3D2GX93	897.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0009943_2	1256908.HMPREF0373_00485	580.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0009943_2	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0009943_2	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_3	phrog_595	161.8	0	head maturation protease	head and packaging
UniRef90	UHGV-0009943_3	UniRef90_A0A3D5ID44	902.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0009943_3	1256908.HMPREF0373_00484	288.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0009943_3	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0009943_3	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0009943_3	PF04233,PF15188,PF04002,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_6	phrog_1129	71.5	8e-21	holin	lysis
UniRef90	UHGV-0009943_6	UniRef90_A0A3D5IBP7	169.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0009943_6	411461.DORFOR_00721	105.0	2.05e-28	N/A	N/A
Pfam	UHGV-0009943_6	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0009943_6	PF06946	N/A	N/A	N/A	N/A
KOfam	UHGV-0009943_7	K21471	52.5	0.000000000000011	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-0009943_7	phrog_2649	72.3	5.4e-21	endolysin	lysis
UniRef90	UHGV-0009943_7	UniRef90_A0A3D5IDY5	272.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0009943_7	44060.JODL01000010_gene1575	80.5	0.0000000000000221	Negative regulator of	N/A
Pfam	UHGV-0009943_7	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
Pfam	UHGV-0009943_7	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0009943_7	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-0009943_7	PF00877,PF01471,NF033742,NF038080,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_8	phrog_194	65.0	1.6e-18	head scaffolding protein	head and packaging
UniRef90	UHGV-0009943_8	UniRef90_A0A6N3C3T0	88.6	3.83e-18	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0009943_8	929506.CbC4_1215	77.0	0.0000000000000115	Phage minor structural protein GP20	N/A
Pfam	UHGV-0009943_8	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0009943_8	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_9	phrog_544	225.6	0	major head protein	head and packaging
UniRef90	UHGV-0009943_9	UniRef90_A0A3E3E9P8	429.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0009943_9	411471.SUBVAR_06940	265.0	0	N/A	N/A
NCBIFam	UHGV-0009943_9	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0009943_9	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_10	phrog_1236	150.7	5.60519e-45	head protein	head and packaging
eggNOG-mapper	UHGV-0009943_10	1256908.HMPREF0373_00475	158.0	0	N/A	N/A
structural_annotation	UHGV-0009943_10	PF05135	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_11	phrog_1059	86.9	1.5e-25	head-tail adaptor	connector
UniRef90	UHGV-0009943_11	UniRef90_R6E225	149.0	2.8026e-44	Putative phage head-tail adaptor	N/A
eggNOG-mapper	UHGV-0009943_11	1256908.HMPREF0373_00474	122.0	1.38e-34	N/A	N/A
Pfam	UHGV-0009943_11	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
structural_annotation	UHGV-0009943_11	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009943_12	UniRef90_UPI001C107D65	111.0	1.76e-27	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0009943_12	1235800.C819_02230	85.1	6.45e-19	N/A	N/A
Pfam	UHGV-0009943_12	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0009943_12	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0009943_13	1235800.C819_02229	80.1	1.59e-17	N/A	N/A
structural_annotation	UHGV-0009943_13	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_14	phrog_885	175.8	0	major tail protein	tail
eggNOG-mapper	UHGV-0009943_14	1256908.HMPREF0373_00471	173.0	0	N/A	N/A
structural_annotation	UHGV-0009943_14	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_15	phrog_1021	68.1	6.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0009943_15	929506.CbC4_1222	56.6	0.0000000176	N/A	N/A
PHROG	UHGV-0009943_17	phrog_6900	222.7	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0009943_17	1123312.KB904569_gene357	274.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-0009943_17	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0009943_17	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_18	phrog_33	51.2	0.000000000000026	distal tail protein Dit	tail
UniRef90	UHGV-0009943_18	UniRef90_A0A351TQW0	234.0	0	MtfA protein	N/A
eggNOG-mapper	UHGV-0009943_18	411490.ANACAC_00709	205.0	0	phage tail	N/A
COG	UHGV-0009943_18	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0009943_18	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_19	phrog_3558	387.0	0	tail protein	tail
UniRef90	UHGV-0009943_19	UniRef90_A0A7U9XC50	263.0	0	Chromosome partition protein Smc	N/A
eggNOG-mapper	UHGV-0009943_19	877414.ATWA01000019_gene2050	254.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0009943_19	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0009943_19	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0009943_19	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0009943_19	PF06605,PF21683,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_21	phrog_28673	87.0	1.1e-25	tail protein	tail
UniRef90	UHGV-0009943_21	UniRef90_A0A1I0NKV5	79.7	0.00000000000351	Cell shape-determining protein MreC	N/A
eggNOG-mapper	UHGV-0009943_21	1540090.A0A0A0RS40_9CAUD	98.6	1.52e-18	N/A	N/A
structural_annotation	UHGV-0009943_21	PF14606,PF00722	N/A	N/A	N/A	N/A
PHROG	UHGV-0009943_22	phrog_1863	70.5	1.3e-20	N/A	unknown function
UniRef90	UHGV-0009943_22	UniRef90_A0A8D9UH94	73.9	0.00000000000000118	Hemolysin	N/A
eggNOG-mapper	UHGV-0009943_22	1226322.HMPREF1545_04027	75.9	3.26e-17	N/A	N/A
KOfam	UHGV-0009943_24	K14059	69.0	1.1e-19	int; integrase	N/A
PHROG	UHGV-0009943_24	phrog_7685	54.4	0.0000000000000022	integrase	integration and excision
UniRef90	UHGV-0009943_24	UniRef90_A0A1Q6PVS0	152.0	5.60519e-45	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0009943_24	1235797.C816_02286	103.0	4.69e-26	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0009943_24	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0009943_24	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
KOfam	UHGV-0009943_26	K03088	103.6	2.6e-30	rpoE; RNA polymerase sigma-70 factor, ECF subfamily	N/A
PHROG	UHGV-0009943_26	phrog_1740	62.5	5.6e-18	RNA polymerase sigma factor	transcription regulation
UniRef90	UHGV-0009943_26	UniRef90_A0A7C6SPT3	104.0	6.18e-25	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0009943_26	693746.OBV_08070	80.9	1.52e-16	Sigma-70 region 2	N/A
Pfam	UHGV-0009943_26	PF04542	N/A	N/A	Sigma-70 region 2	Sigma70_r2
Pfam	UHGV-0009943_26	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
NCBIFam	UHGV-0009943_26	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0009943_26	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0009943_26	PF08281,PF04542,MF_00962,TIGR02985,COG1595	N/A	N/A	N/A	N/A
UniRef90	UHGV-0009943_27	UniRef90_A0A3D5ICL3	456.0	0	N/A	N/A
Pfam	UHGV-0009943_27	PF14285	N/A	N/A	N/A	DUF4367
COG	UHGV-0009943_27	COG2834	N/A	N/A	Outer membrane lipoprotein-sorting protein	N/A
structural_annotation	UHGV-0009943_27	PF14285,NF040946,COG5435	N/A	N/A	N/A	N/A
KOfam	UHGV-0009943_28	K12035	42.3	0.0000000000056	TRIM71; tripartite motif-containing protein 71 [EC:2.3.2.27]	N/A
Pfam	UHGV-0009943_30	PF02687	N/A	N/A	FtsX-like permease family	FtsX

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0009943	Yes	23,692	59	58	1