vOTU vOTU-089516

vOTU: vOTU-089516

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-089516
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-01155 → vOTU-089516
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_G
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0179443
Biosample ID	SAMN09781789
Genome length (bp)	30,478 bps
CheckV completeness	75.57% (Medium-quality)
CDS count	45
CDS density	93.33%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_G	Total connections	228	Host agreement	76.32
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.57)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0179443_4	K03763	185.9	0	polC; DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7]	N/A
PHROG	UHGV-0179443_4	phrog_192	158.3	0	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179443_4	UniRef90_A0A3R6GCG9	290.0	0	Exonuclease	N/A
eggNOG-mapper	UHGV-0179443_4	1123288.SOV_2c03960	276.0	0	DNA polymerase III	N/A
PADLOC	UHGV-0179443_4	cd06127	136.4	2.5e-40	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0179443_4	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0179443_4	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
NCBIFam	UHGV-0179443_4	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-0179443_4	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0179443_4	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
UniRef90	UHGV-0179443_5	UniRef90_UPI001D0DC7B2	56.6	0.0000094	zinc ribbon domain-containing protein	N/A
eggNOG-mapper	UHGV-0179443_5	1536770.R50345_07130	63.9	0.00000000609	N/A	N/A
structural_annotation	UHGV-0179443_5	PF06776,COG5342	N/A	N/A	N/A	N/A
KOfam	UHGV-0179443_7	K22300	59.8	6.2e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0179443_7	phrog_8	43.7	0.0000000000053	transcriptional regulator	transcription regulation
UniRef90	UHGV-0179443_7	UniRef90_A0A2A7AM72	55.5	0.000000136	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0179443_7	877424.ATWC01000056_gene1865	52.8	0.000000321	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0179443_7	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0179443_7	COG3780	N/A	N/A	DNA endonuclease related to intein-encoded endonucleases	N/A
structural_annotation	UHGV-0179443_7	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179443_16	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_17	phrog_72	49.8	0.00000000000006	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0179443_17	411471.SUBVAR_05829	145.0	1.02995e-41	N/A	N/A
structural_annotation	UHGV-0179443_17	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_18	phrog_7566	83.1	2.3e-24	N/A	unknown function
eggNOG-mapper	UHGV-0179443_18	411471.SUBVAR_05830	104.0	8.45e-28	N/A	N/A
KOfam	UHGV-0179443_19	K03111	143.1	3.00018e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0179443_19	phrog_44	141.8	4.19969e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179443_19	UniRef90_A0A2A7B6R5	248.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0179443_19	411483.FAEPRAA2165_01975	201.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0179443_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0179443_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0179443_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0179443_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0179443_19	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_20	phrog_6969	42.1	0.00000000001	N/A	unknown function
eggNOG-mapper	UHGV-0179443_20	748224.HMPREF9436_00735	142.0	2.68e-37	N/A	N/A
Pfam	UHGV-0179443_20	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-0179443_20	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0179443_20	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-0179443_22	K03496	204.8	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0179443_22	phrog_164	147.2	1.09301e-43	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179443_22	UniRef90_A0A2A7B6H3	272.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0179443_22	411471.SUBVAR_05839	201.0	0	AAA domain	N/A
Pfam	UHGV-0179443_22	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0179443_22	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0179443_22	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
UniRef90	UHGV-0179443_23	UniRef90_A0A355JDC2	94.0	1.51e-21	N/A	N/A
KOfam	UHGV-0179443_24	K03497	85.1	1.5e-24	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0179443_24	phrog_4715	112.4	4.4e-33	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179443_24	UniRef90_A0A2A7AMC5	283.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0179443_24	411471.SUBVAR_05842	149.0	1.31e-37	ParB-like nuclease domain	N/A
Pfam	UHGV-0179443_24	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0179443_24	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0179443_24	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0179443_25	PF04545	N/A	N/A	N/A	N/A
KOfam	UHGV-0179443_27	K00571	188.2	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0179443_27	phrog_67	196.1	0	DNA methyltransferase	other
UniRef90	UHGV-0179443_27	UniRef90_A0A1V5NVC0	253.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0179443_27	1217656.F964_00563	232.0	0	DNA methylase	N/A
PADLOC	UHGV-0179443_27	MTase_II_00037	151.9	0	Type II methyltransferase	RM
Pfam	UHGV-0179443_27	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0179443_27	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0179443_27	PF01555,MF_01872,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_28	phrog_119	61.7	1.2e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0179443_28	UniRef90_A0A2A7AM49	209.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0179443_28	349161.Dred_2609	90.9	3.45e-22	HNH nucleases	N/A
COG	UHGV-0179443_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0179443_29	phrog_13845	63.6	2.3e-18	N/A	unknown function
eggNOG-mapper	UHGV-0179443_29	1399942.U3PDR2_9CAUD	71.6	0.000000000000018	N/A	N/A
Pfam	UHGV-0179443_29	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0179443_29	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_30	phrog_9	235.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0179443_30	UniRef90_A0A2A7ALT4	1029.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0179443_30	610130.Closa_0741	623.0	0	Phage Terminase	N/A
Pfam	UHGV-0179443_30	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0179443_30	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0179443_30	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_31	phrog_12	137.1	9.99995e-41	portal protein	head and packaging
UniRef90	UHGV-0179443_31	UniRef90_A0A2A7B6S8	558.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0179443_31	349161.Dred_2606	290.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0179443_31	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0179443_31	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0179443_31	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0179443_31	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0179443_32	K01358	88.9	7.7e-26	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0179443_32	phrog_94	139.8	3.09995e-41	head maturation protease	head and packaging
UniRef90	UHGV-0179443_32	UniRef90_UPI001C10F40E	159.0	2.38221e-44	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0179443_32	1232452.BAIB02000007_gene1626	147.0	4.47995e-41	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0179443_32	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0179443_32	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0179443_32	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_33	phrog_10	128.1	5.2e-38	major head protein	head and packaging
UniRef90	UHGV-0179443_33	UniRef90_A0A2A7B712	761.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0179443_33	1235792.C808_00086	458.0	0	Phage capsid family	N/A
Pfam	UHGV-0179443_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0179443_33	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0179443_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0179443_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0179443_33	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_34	phrog_749	54.5	0.0000000000000019	N/A	unknown function
UniRef90	UHGV-0179443_34	UniRef90_A0A7V7BBS9	68.2	0.00000000000094	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0179443_34	1235792.C808_00087	79.7	5.24e-18	N/A	N/A
PHROG	UHGV-0179443_35	phrog_19734	100.6	1.2e-29	N/A	unknown function
UniRef90	UHGV-0179443_35	UniRef90_A0A6I7GNS7	120.0	2.18e-32	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0179443_35	349161.Dred_2602	71.6	0.0000000000000289	N/A	N/A
structural_annotation	UHGV-0179443_35	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0179443_36	999413.HMPREF1094_02005	72.4	0.00000000000000441	N/A	N/A
structural_annotation	UHGV-0179443_36	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_37	phrog_5	47.8	0.00000000000034	tail completion or Neck1 protein	connector
UniRef90	UHGV-0179443_37	UniRef90_A0A1C6FG30	128.0	1.67e-34	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0179443_37	908340.HMPREF9406_2573	119.0	4.9e-32	N/A	N/A
Pfam	UHGV-0179443_37	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0179443_37	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0179443_37	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_38	phrog_88	84.2	1.7e-24	major tail protein	tail
UniRef90	UHGV-0179443_38	UniRef90_A0A7U9IBX1	128.0	8.58e-34	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0179443_38	33035.JPJF01000039_gene278	77.0	0.0000000000000109	N/A	N/A
NCBIFam	UHGV-0179443_38	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0179443_38	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_40	phrog_9959	85.3	4e-25	tail length tape measure protein	tail
UniRef90	UHGV-0179443_40	UniRef90_A0A2A7ALS3	814.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0179443_40	1111131.HMPREF1255_1479	172.0	4.54007e-41	phage tail tape measure protein	N/A
Pfam	UHGV-0179443_40	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0179443_40	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0179443_40	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0179443_40	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_41	phrog_33	89.2	8.1e-26	distal tail protein Dit	tail
UniRef90	UHGV-0179443_41	UniRef90_A0A1C6H6D2	127.0	1.17e-32	Phage-related protein	N/A
eggNOG-mapper	UHGV-0179443_41	439292.Bsel_2995	111.0	3.41e-27	tail component	N/A
COG	UHGV-0179443_41	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0179443_41	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0179443_42	phrog_1067	192.4	0	minor head protein	head and packaging
UniRef90	UHGV-0179443_42	UniRef90_A0A2A7AM44	494.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0179443_42	1123263.AUKY01000068_gene489	219.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0179443_42	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0179443_42	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0179443_42	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0179443_42	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
KOfam	UHGV-0179443_45	K07273	102.1	7.6e-30	acm; lysozyme	N/A
PHROG	UHGV-0179443_45	phrog_291	72.2	8e-21	endolysin	lysis
UniRef90	UHGV-0179443_45	UniRef90_A0A564U0D3	271.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0179443_45	665956.HMPREF1032_02177	117.0	3.28e-29	hydrolase, family 25	N/A
Pfam	UHGV-0179443_45	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0179443_45	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0179443	Yes	30,478	55	76	1