vOTU vOTU-089585

vOTU: vOTU-089585

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-089585
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00439 → vGENUS-00414 → vOTU-089585
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → COE1
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1479684
Biosample ID	SAMEA2582124
Genome length (bp)	46,599 bps
CheckV completeness	76.94% (Medium-quality)
CDS count	80
CDS density	86.54%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → COE1	Total connections	535	Host agreement	74.21
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 76.94)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1479684_1	phrog_4433	196.7	0	N/A	unknown function
UniRef90	UHGV-1479684_1	UniRef90_UPI00045B9709	112.0	1.29e-28	collagen-like protein	N/A
eggNOG-mapper	UHGV-1479684_1	665950.HMPREF1025_01373	174.0	0	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1479684_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
eggNOG-mapper	UHGV-1479684_2	1235790.C805_00035	50.4	0.00000646	N/A	N/A
KOfam	UHGV-1479684_3	K19171	99.0	4.6e-29	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-1479684_3	phrog_77	161.2	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1479684_3	UniRef90_A0A8D9PGW5	603.0	0	Chromosome partition protein	N/A
eggNOG-mapper	UHGV-1479684_3	1298920.KI911353_gene2731	261.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-1479684_3	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1479684_3	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1479684_3	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
KOfam	UHGV-1479684_5	K03111	53.3	0.0000000000000032	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1479684_5	phrog_26861	86.3	5.9e-26	N/A	unknown function
UniRef90	UHGV-1479684_5	UniRef90_A0A359IM83	115.0	6.07e-29	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1479684_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
structural_annotation	UHGV-1479684_5	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
UniRef90	UHGV-1479684_6	UniRef90_A0A1Y4F7C9	51.2	0.0000073	Spo0A_C domain-containing protein	N/A
Pfam	UHGV-1479684_6	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
structural_annotation	UHGV-1479684_6	PF08769,TIGR02875	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_9	phrog_22292	65.7	5.8e-19	N/A	unknown function
KOfam	UHGV-1479684_10	K07741	191.8	0	antB; anti-repressor protein	N/A
PHROG	UHGV-1479684_10	phrog_63	168.1	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-1479684_10	UniRef90_UPI001C00DDF6	353.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-1479684_10	658655.HMPREF0988_02592	309.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1479684_10	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-1479684_10	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1479684_10	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1479684_10	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_13	phrog_2657	138.9	6.8005e-42	transcriptional regulator	transcription regulation
UniRef90	UHGV-1479684_13	UniRef90_A5ZQW4	311.0	0	Phage regulatory protein, Rha family	N/A
eggNOG-mapper	UHGV-1479684_13	411459.RUMOBE_01391	311.0	0	N/A	N/A
Pfam	UHGV-1479684_13	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1479684_13	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1479684_13	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1479684_13	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
KOfam	UHGV-1479684_17	K18830	68.2	1.5e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1479684_17	phrog_2967	60.4	3.3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1479684_17	UniRef90_A0A6L8T004	135.0	5.71e-39	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1479684_17	1095750.HMPREF9970_1686	99.4	3.09e-25	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-1479684_17	retron_type_VI_hth_cluster2_1	46.7	0.00000000000078	N/A	Retron
Pfam	UHGV-1479684_17	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1479684_17	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1479684_17	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_19	phrog_20274	135.6	2.5e-40	N/A	unknown function
UniRef90	UHGV-1479684_19	UniRef90_A0A1C5ZRD7	174.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-1479684_19	1235799.C818_04238	168.0	0	Putative ABC-transporter type IV	N/A
Pfam	UHGV-1479684_19	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-1479684_19	COG4905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1479684_19	PF06541,COG4905	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_20	phrog_374	229.7	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1479684_20	742767.HMPREF9456_02044	200.0	0	N/A	N/A
PHROG	UHGV-1479684_21	phrog_1348	46.0	0.00000000000091	tail fiber protein	tail
UniRef90	UHGV-1479684_21	UniRef90_A0A417WCN8	142.0	4.16e-38	Acyl carrier protein	N/A
eggNOG-mapper	UHGV-1479684_21	1235799.C818_04237	199.0	0	N/A	N/A
structural_annotation	UHGV-1479684_21	PF14301	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1479684_22	1304866.K413DRAFT_0769	58.9	0.0000000651	N/A	N/A
PHROG	UHGV-1479684_23	phrog_18725	58.1	1.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1479684_23	1235800.C819_00473	79.0	0.00000000000000376	N/A	N/A
structural_annotation	UHGV-1479684_23	PF19077	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_24	phrog_13879	316.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1479684_24	742740.HMPREF9474_03516	610.0	0	N/A	N/A
structural_annotation	UHGV-1479684_24	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_25	phrog_1194	56.9	3.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-1479684_25	585501.HMPREF6123_0824	88.6	6.45e-21	N/A	N/A
structural_annotation	UHGV-1479684_25	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1479684_26	1304866.K413DRAFT_0769	62.8	0.0000000000489	N/A	N/A
PHROG	UHGV-1479684_29	phrog_1535	154.8	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1479684_29	1211844.CBLM010000016_gene1482	207.0	0	tape measure	N/A
COG	UHGV-1479684_29	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
KOfam	UHGV-1479684_30	K07273	183.3	0	acm; lysozyme	N/A
PHROG	UHGV-1479684_30	phrog_291	152.5	2.8026e-45	endolysin	lysis
UniRef90	UHGV-1479684_30	UniRef90_UPI001D05F2B6	369.0	0	peptidoglycan-binding protein	N/A
eggNOG-mapper	UHGV-1479684_30	1235800.C819_00458	219.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1479684_30	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1479684_30	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-1479684_30	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1479684_30	PF01183,PF01471,MF_02227,NF007360,COG3757,COG3409	N/A	N/A	N/A	N/A
UniRef90	UHGV-1479684_33	UniRef90_A0A8D9PGN2	202.0	0	Major tail protein	N/A
structural_annotation	UHGV-1479684_33	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1479684_34	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-1479684_35	UniRef90_UPI001BBD4500	149.0	6.5861e-43	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1479684_35	397290.C810_01411	193.0	0	N/A	N/A
structural_annotation	UHGV-1479684_35	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1479684_36	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_37	phrog_1129	76.3	2.6e-22	holin	lysis
UniRef90	UHGV-1479684_37	UniRef90_A0A8D9UII9	162.0	0	Holin	N/A
eggNOG-mapper	UHGV-1479684_37	411461.DORFOR_00721	107.0	2.8e-29	N/A	N/A
Pfam	UHGV-1479684_37	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1479684_37	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_38	phrog_4105	92.7	2.8e-27	N/A	unknown function
eggNOG-mapper	UHGV-1479684_38	411459.RUMOBE_00911	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-1479684_39	397290.C810_01402	53.5	0.0000002	N/A	N/A
structural_annotation	UHGV-1479684_40	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_41	phrog_29	179.8	0	major head protein	head and packaging
UniRef90	UHGV-1479684_41	UniRef90_UPI001D02C54B	545.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1479684_41	1298920.KI911353_gene2660	366.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1479684_41	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1479684_41	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_42	phrog_909	56.4	5.2e-16	major head protein	head and packaging
eggNOG-mapper	UHGV-1479684_42	1298920.KI911353_gene2661	144.0	1.62551e-43	N/A	N/A
UniRef90	UHGV-1479684_43	UniRef90_R6C0B6	148.0	4.69015e-42	Phage capsid scaffolding protein	N/A
PHROG	UHGV-1479684_44	phrog_64	176.0	0	portal protein	head and packaging
UniRef90	UHGV-1479684_44	UniRef90_R6CA99	749.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-1479684_44	1298920.KI911353_gene2663	448.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1479684_44	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1479684_44	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_45	phrog_36	74.0	2.6e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-1479684_45	UniRef90_A0A352SH29	110.0	6.17e-29	RNA polymerase subunit sigma-70 (Fragment)	N/A
eggNOG-mapper	UHGV-1479684_45	97138.C820_00221	80.9	1.65e-17	sigma factor activity	N/A
COG	UHGV-1479684_45	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1479684_45	PF07374,MF_00674,NF008895,COG1191	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_46	phrog_38	157.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1479684_46	UniRef90_UPI001D009E65	1041.0	0	phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1479684_46	1121866.AUGK01000003_gene1428	230.0	0	chromosome segregation	N/A
NCBIFam	UHGV-1479684_46	TIGR01630.1	N/A	N/A	phage terminase large subunit	N/A
COG	UHGV-1479684_46	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1479684_46	PF17289,PF05876,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
UniRef90	UHGV-1479684_51	UniRef90_A0A8D9PG29	143.0	4.62428e-43	Acetyl-coA carboxylase zinc finger domain protein	N/A
structural_annotation	UHGV-1479684_52	PF04466	N/A	N/A	N/A	N/A
UniRef90	UHGV-1479684_60	UniRef90_A0A8D9UIS5	114.0	1.06e-27	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1479684_60	658655.HMPREF0988_00895	144.0	3.01994e-41	N/A	N/A
eggNOG-mapper	UHGV-1479684_62	457412.RSAG_02595	65.5	0.00000000312	N/A	N/A
PADLOC	UHGV-1479684_62	mkCas0106	46.0	5.4e-21	CAS-I-B; effector_LS	CRISPR-CAS
KOfam	UHGV-1479684_66	K07727	42.0	0.000000000023	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-1479684_66	UniRef90_A0A7U9S3B7	135.0	4.81e-40	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1479684_66	397291.C804_01058	61.6	0.0000000000105	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1479684_66	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1479684_66	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1479684_68	PF13973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1479684_71	397290.C810_01336	127.0	5.94e-37	N/A	N/A
structural_annotation	UHGV-1479684_71	PF20352,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_72	phrog_4608	148.1	6.16571e-44	anti-repressor	transcription regulation
UniRef90	UHGV-1479684_72	UniRef90_R7BIG3	234.0	0	ORF6N domain-containing protein	N/A
eggNOG-mapper	UHGV-1479684_72	658655.HMPREF0988_00907	191.0	0	ORF6N domain	N/A
Pfam	UHGV-1479684_72	PF10543	N/A	N/A	ORF6N domain	ORF6N
structural_annotation	UHGV-1479684_72	PF10543,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-1479684_74	UniRef90_UPI00174DD543	62.0	0.0000000000132	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1479684_74	445971.ANASTE_00673	49.3	0.000000279	N/A	N/A
structural_annotation	UHGV-1479684_74	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1479684_75	658655.HMPREF0988_00915	114.0	2.72e-28	N/A	N/A
PHROG	UHGV-1479684_76	phrog_20016	216.8	0	N/A	unknown function
UniRef90	UHGV-1479684_76	UniRef90_A0A285PT46	160.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1479684_76	397290.C810_05214	217.0	0	N/A	N/A
structural_annotation	UHGV-1479684_76	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1479684_77	phrog_16490	194.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1479684_77	397290.C810_01328	197.0	0	N/A	N/A
eggNOG-mapper	UHGV-1479684_78	658655.HMPREF0988_00918	93.2	4.4e-24	N/A	N/A
PHROG	UHGV-1479684_79	phrog_21718	44.1	0.0000000000029	N/A	unknown function
eggNOG-mapper	UHGV-1479684_79	658655.HMPREF0988_00919	110.0	2.67e-28	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1479684	Yes	46,599	38	77	1