vOTU vOTU-090061

vOTU: vOTU-090061

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-090061
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp003487665
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00005 → vGENUS-00181 → vOTU-090061
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0037675
Biosample ID	SAMEA4969178
Genome length (bp)	28,404 bps
CheckV completeness	67.42% (Medium-quality)
CDS count	48
CDS density	92.26%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	168	Host agreement	85.12
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp003487665	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 67.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0037675_1	1226322.HMPREF1545_00079	89.0	1.44e-21	N/A	N/A
PHROG	UHGV-0037675_2	phrog_28802	67.6	1.4e-19	N/A	unknown function
structural_annotation	UHGV-0037675_2	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_3	phrog_20016	192.8	0	N/A	unknown function
UniRef90	UHGV-0037675_3	UniRef90_A0A285PT46	191.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0037675_3	397290.C810_05214	167.0	0	N/A	N/A
structural_annotation	UHGV-0037675_3	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_4	phrog_16490	144.1	1.3004e-42	N/A	unknown function
eggNOG-mapper	UHGV-0037675_4	658655.HMPREF0988_00917	133.0	2.29e-35	N/A	N/A
PHROG	UHGV-0037675_5	phrog_22984	85.6	3.6e-25	N/A	unknown function
PHROG	UHGV-0037675_6	phrog_21718	104.4	1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0037675_6	397290.C810_05210	72.8	0.0000000000000509	N/A	N/A
PHROG	UHGV-0037675_7	phrog_3754	121.4	5.8e-36	N/A	unknown function
eggNOG-mapper	UHGV-0037675_7	1226322.HMPREF1545_00073	177.0	0	N/A	N/A
PHROG	UHGV-0037675_9	phrog_435	57.6	2.8e-16	endolysin	lysis
UniRef90	UHGV-0037675_9	UniRef90_A0A8D9PDS4	389.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-0037675_9	1226322.HMPREF1545_01953	85.9	7.55e-17	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0037675_9	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0037675_9	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0037675_9	PF01520,PF01471,MF_00562,TIGR02883,TIGR03979,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_10	phrog_1129	74.0	1.3e-21	holin	lysis
UniRef90	UHGV-0037675_10	UniRef90_A0A8D9PDD4	181.0	0	Holin	N/A
eggNOG-mapper	UHGV-0037675_10	1226322.HMPREF1545_00069	110.0	2.5e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0037675_10	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0037675_10	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_11	phrog_4105	103.8	9.9e-31	N/A	unknown function
UniRef90	UHGV-0037675_11	UniRef90_A0A8D9UHA9	205.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0037675_11	411460.RUMTOR_01326	140.0	6.72063e-42	N/A	N/A
PHROG	UHGV-0037675_13	phrog_2310	51.2	0.000000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0037675_13	1151292.QEW_0364	49.7	0.000000137	N/A	N/A
Pfam	UHGV-0037675_16	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0037675_16	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_18	phrog_18725	71.4	4.5e-21	N/A	unknown function
eggNOG-mapper	UHGV-0037675_18	693746.OBV_18220	102.0	7.68e-25	N/A	N/A
structural_annotation	UHGV-0037675_18	PF13754,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-0037675_19	K01361	62.1	3.7e-18	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-0037675_19	phrog_11157	230.4	0	N/A	unknown function
UniRef90	UHGV-0037675_19	UniRef90_UPI001C10C6DC	392.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0037675_19	1256908.HMPREF0373_00674	291.0	0	N/A	N/A
Pfam	UHGV-0037675_19	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0037675_19	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
NCBIFam	UHGV-0037675_19	NF033510.3	N/A	N/A	Ca2+-stabilized repeat-containing adhesin	N/A
COG	UHGV-0037675_19	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0037675_19	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_21	phrog_13879	245.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0037675_21	1226322.HMPREF1545_00061	486.0	0	N/A	N/A
structural_annotation	UHGV-0037675_21	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_22	phrog_1194	60.3	3.2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0037675_22	1226322.HMPREF1545_00060	238.0	0	N/A	N/A
structural_annotation	UHGV-0037675_22	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_23	phrog_1535	126.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0037675_23	UniRef90_A0A810PX76	309.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0037675_23	1235797.C816_04182	267.0	0	SLT domain	N/A
COG	UHGV-0037675_23	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037675_23	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_24	phrog_706	111.9	5.7e-33	N/A	unknown function
UniRef90	UHGV-0037675_24	UniRef90_UPI000682A80B	219.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0037675_24	693746.OBV_18170	210.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0037675_24	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0037675_24	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_25	phrog_11299	70.8	2.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0037675_25	693746.OBV_18160	144.0	2.18042e-42	N/A	N/A
structural_annotation	UHGV-0037675_25	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_26	phrog_3099	91.6	9.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0037675_26	1226322.HMPREF1545_00056	245.0	0	N/A	N/A
structural_annotation	UHGV-0037675_26	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_27	phrog_3266	63.5	3.3e-18	tail completion	connector
UniRef90	UHGV-0037675_27	UniRef90_A0A2Z4QA01	123.0	8.73e-34	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0037675_27	1232443.BAIA02000078_gene24	182.0	0	N/A	N/A
structural_annotation	UHGV-0037675_27	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_28	phrog_556	78.3	8.5e-23	minor head protein	head and packaging
UniRef90	UHGV-0037675_28	UniRef90_UPI00195E1497	184.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0037675_28	1226322.HMPREF1545_00054	154.0	0	Minor capsid protein	N/A
Pfam	UHGV-0037675_28	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0037675_28	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_29	phrog_3366	89.1	4.8e-26	N/A	unknown function
eggNOG-mapper	UHGV-0037675_29	1226322.HMPREF1545_00053	149.0	1.96182e-44	N/A	N/A
structural_annotation	UHGV-0037675_29	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_30	phrog_541	104.9	4.9e-31	head-tail adaptor	connector
eggNOG-mapper	UHGV-0037675_30	642492.Clole_0822	71.6	0.000000000000046	N/A	N/A
PHROG	UHGV-0037675_31	phrog_212	267.2	0	major head protein	head and packaging
UniRef90	UHGV-0037675_31	UniRef90_A0A2V2FIN1	498.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-0037675_31	935836.JAEL01000021_gene1494	345.0	0	N/A	N/A
structural_annotation	UHGV-0037675_31	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_32	phrog_194	91.6	1.1e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-0037675_32	UniRef90_A0A2Z4Q9Y8	127.0	1.17e-33	Minor structural protein	N/A
eggNOG-mapper	UHGV-0037675_32	1232443.BAIA02000078_gene31	96.3	1.55e-22	N/A	N/A
Pfam	UHGV-0037675_32	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0037675_32	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037675_33	PF18152	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_34	phrog_581	284.8	0	minor head protein	head and packaging
UniRef90	UHGV-0037675_34	UniRef90_A0A1C5N7V1	495.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0037675_34	1226322.HMPREF1545_00046	328.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0037675_34	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0037675_34	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037675_34	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_35	phrog_533	395.2	0	portal protein	head and packaging
UniRef90	UHGV-0037675_35	UniRef90_A0A2U1BEK0	702.0	0	A118 family predicted phage portal protein	N/A
eggNOG-mapper	UHGV-0037675_35	1226322.HMPREF1545_00044	667.0	0	N/A	N/A
Pfam	UHGV-0037675_35	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0037675_35	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0037675_36	K06909	391.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0037675_36	phrog_5653	161.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0037675_36	UniRef90_A0A2U1BEH4	754.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0037675_36	33035.JPJF01000106_gene3136	472.0	0	Terminase small subunit	N/A
Pfam	UHGV-0037675_36	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0037675_36	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0037675_36	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0037675_36	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0037675_36	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0037675_37	K07474	103.3	4.5e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0037675_37	phrog_51	106.0	3.1e-31	terminase small subunit	head and packaging
UniRef90	UHGV-0037675_37	UniRef90_A0A396NMY4	114.0	2.79e-30	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0037675_37	66692.ABC2840	103.0	9.01e-27	Terminase small subunit	N/A
Pfam	UHGV-0037675_37	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0037675_37	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0037675_37	PF03592,COG3728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037675_38	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0037675_39	K22299	48.1	0.00000000000029	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0037675_39	phrog_8	67.1	3.8e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0037675_39	UniRef90_A0A8D9PDC4	154.0	0	Repressor protein	N/A
eggNOG-mapper	UHGV-0037675_39	1226322.HMPREF1545_00039	79.3	1.19e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-0037675_39	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0037675_39	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0037675_39	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0037675_40	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-0037675_41	phrog_18716	179.0	0	N/A	unknown function
UniRef90	UHGV-0037675_41	UniRef90_R6RP50	183.0	0	N/A	N/A
eggNOG-mapper	UHGV-0037675_41	665959.HMPREF1013_00856	129.0	1.96e-37	N/A	N/A
Pfam	UHGV-0037675_41	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0037675_41	PF18909	N/A	N/A	N/A	N/A
UniRef90	UHGV-0037675_45	UniRef90_A0A8D9PDK1	84.3	1.37e-18	Anti-repressor	N/A
PHROG	UHGV-0037675_46	phrog_1384	134.9	5.19999e-40	Mom-like DNA modification protein	other
eggNOG-mapper	UHGV-0037675_46	665956.HMPREF1032_03086	276.0	0	COG NOG12663 non supervised orthologous group	N/A
structural_annotation	UHGV-0037675_46	PF11124,MF_02210,NF040502,COG3818	N/A	N/A	N/A	N/A
KOfam	UHGV-0037675_48	K00558	42.0	1.4e-17	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0037675_48	phrog_16528	79.4	6.7e-28	DNA methyltransferase	other
UniRef90	UHGV-0037675_48	UniRef90_A0A6L5TDR3	182.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0037675_48	657322.FPR_26610	182.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
Pfam	UHGV-0037675_48	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0037675_48	COG0270	N/A	N/A	DNA-cytosine methylase	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0037675	Yes	28,404	55	67	1