vOTU vOTU-090076

vOTU: vOTU-090076

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-090076
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-01680 → vGENUS-01781 → vOTU-090076
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0207153
Biosample ID	SAMN11252268
Genome length (bp)	34,850 bps
CheckV completeness	89.66% (Medium-quality)
CDS count	47
CDS density	94.64%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	653	Host agreement	97.4
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	15	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 89.66)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0207153_1	phrog_355	48.4	0.00000000000014	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207153_1	UniRef90_UPI001E302724	151.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-0207153_1	97138.C820_00250	109.0	3.62e-30	N/A	N/A
Pfam	UHGV-0207153_1	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0207153_1	PF14359,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-0207153_2	K01447	124.3	1.3e-36	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0207153_2	phrog_9611	145.1	4.40008e-43	endolysin	lysis
UniRef90	UHGV-0207153_2	UniRef90_R5B1Z3	384.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0207153_2	97138.C820_00588	211.0	0	Ami_2	N/A
Pfam	UHGV-0207153_2	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-0207153_2	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0207153_2	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_3	phrog_199	65.1	8.2e-19	holin	lysis
UniRef90	UHGV-0207153_3	UniRef90_R5AT18	279.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-0207153_3	1121344.JHZO01000003_gene684	150.0	2.10195e-44	toxin secretion phage lysis holin	N/A
Pfam	UHGV-0207153_3	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0207153_3	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0207153_3	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0207153_3	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207153_5	UniRef90_R5ARW1	3050.0	0	LPD3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0207153_5	1226322.HMPREF1545_00787	625.0	0	N/A	N/A
KOfam	UHGV-0207153_6	K06400	268.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0207153_6	phrog_95	287.5	0	integrase	integration and excision
UniRef90	UHGV-0207153_6	UniRef90_A0A7V6UC72	473.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0207153_6	1121344.JHZO01000001_gene439	473.0	0	resolvase	N/A
Pfam	UHGV-0207153_6	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0207153_6	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0207153_6	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0207153_6	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0207153_6	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0207153_9	K07729	54.4	0.0000000000000028	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0207153_9	UniRef90_R5AVU4	112.0	2.17e-31	CI-like repressor	N/A
eggNOG-mapper	UHGV-0207153_9	1220551.SCHR_06575	48.5	0.000000852	transcriptional	N/A
Pfam	UHGV-0207153_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0207153_9	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0207153_9	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0207153_11	K22300	57.0	4.7e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0207153_11	phrog_4	52.3	0.000000000000014	transcriptional repressor	transcription regulation
UniRef90	UHGV-0207153_11	UniRef90_K1UM29	184.0	0	Helix-turn-helix domain protein (Fragment)	N/A
eggNOG-mapper	UHGV-0207153_11	903814.ELI_1263	137.0	3.49e-40	Helix-turn-helix domain	N/A
Pfam	UHGV-0207153_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0207153_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0207153_11	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_14	phrog_7566	108.4	2.8e-32	N/A	unknown function
UniRef90	UHGV-0207153_14	UniRef90_A0A8D9UHC0	131.0	1.52e-37	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0207153_14	693746.OBV_24070	126.0	3.21e-36	N/A	N/A
structural_annotation	UHGV-0207153_15	PF12728,NF040990	N/A	N/A	N/A	N/A
KOfam	UHGV-0207153_16	K06284	113.2	1.5e-33	abrB; AbrB family transcriptional regulator, transcriptional pleiotropic regulator of transition state genes	N/A
PHROG	UHGV-0207153_16	phrog_4681	103.9	5.2e-31	antitoxin from a toxin-antitoxin system	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0207153_16	UniRef90_R5B3P3	170.0	0	Transcriptional regulator AbrB family	N/A
eggNOG-mapper	UHGV-0207153_16	1382304.JNIL01000001_gene2139	105.0	6.64e-29	AbrB family transcriptional regulator	N/A
Pfam	UHGV-0207153_16	PF04014	N/A	N/A	Antidote-toxin recognition MazE, bacterial antitoxin	MazE_antitoxin
NCBIFam	UHGV-0207153_16	TIGR01439.1	N/A	N/A	transcriptional regulator, AbrB family	N/A
COG	UHGV-0207153_16	COG2002	N/A	N/A	Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module	N/A
structural_annotation	UHGV-0207153_16	PF15937,TIGR01439,NF004424,COG2002	N/A	N/A	N/A	N/A
Pfam	UHGV-0207153_19	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
PHROG	UHGV-0207153_20	phrog_38338	70.7	2.2e-20	N/A	unknown function
UniRef90	UHGV-0207153_20	UniRef90_UPI00137B3A8C	77.8	0.00000000000000121	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0207153_20	693746.OBV_25410	95.5	7.2e-24	N/A	N/A
PHROG	UHGV-0207153_21	phrog_8470	464.0	0	N/A	unknown function
UniRef90	UHGV-0207153_21	UniRef90_UPI001C1063FF	271.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0207153_21	1378168.N510_01842	223.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0207153_21	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0207153_21	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_22	phrog_15609	384.7	0	N/A	unknown function
UniRef90	UHGV-0207153_22	UniRef90_A0A7G9WGA3	131.0	8.26e-32	N/A	N/A
eggNOG-mapper	UHGV-0207153_22	1378168.N510_01841	120.0	6.31e-28	N/A	N/A
Pfam	UHGV-0207153_22	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0207153_22	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0207153_22	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_23	phrog_2245	97.5	1e-28	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0207153_23	UniRef90_A0A4U9RLZ8	79.7	1.48e-17	N/A	N/A
eggNOG-mapper	UHGV-0207153_23	293826.Amet_2596	82.8	8.95e-19	N/A	N/A
structural_annotation	UHGV-0207153_23	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_24	phrog_21498	295.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0207153_24	78346.BRUM_0376	252.0	0	DNA binding	N/A
COG	UHGV-0207153_24	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0207153_24	PF05869,TIGR01712	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_29	phrog_355	73.1	3.3e-21	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207153_29	UniRef90_R5AT00	229.0	0	Gp57	N/A
eggNOG-mapper	UHGV-0207153_29	1397284.AYMN01000083_gene2419	80.1	3.72e-18	N/A	N/A
Pfam	UHGV-0207153_29	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0207153_29	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
PHROG	UHGV-0207153_32	phrog_3584	188.8	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0207153_32	1226322.HMPREF1545_03841	90.9	6.3e-19	N/A	N/A
structural_annotation	UHGV-0207153_32	PF01446,NF041486	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0207153_33	1226322.HMPREF1545_00288	73.6	8.69e-16	N/A	N/A
KOfam	UHGV-0207153_34	K07474	77.5	3.7e-22	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0207153_34	phrog_51	79.1	6e-23	terminase small subunit	head and packaging
UniRef90	UHGV-0207153_34	UniRef90_R5AT05	328.0	0	Terminase small subunit family protein	N/A
eggNOG-mapper	UHGV-0207153_34	1268072.PSAB_06050	77.0	0.00000000000000108	terminase small subunit	N/A
Pfam	UHGV-0207153_34	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0207153_34	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0207153_34	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_35	phrog_2	95.0	9.7e-28	terminase large subunit	head and packaging
UniRef90	UHGV-0207153_35	UniRef90_R5AVW7	1115.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0207153_35	693746.OBV_23980	601.0	0	phage Terminase large subunit	N/A
COG	UHGV-0207153_35	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0207153_35	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207153_38	COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_39	phrog_371	53.9	0.0000000000000027	major head protein	head and packaging
UniRef90	UHGV-0207153_39	UniRef90_R7FUR2	244.0	0	Mu-like prophage major head subunit gpt-like protein	N/A
Pfam	UHGV-0207153_39	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0207153_39	PF19774,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_41	phrog_13046	244.0	0	N/A	unknown function
structural_annotation	UHGV-0207153_41	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_42	phrog_3287	236.0	0	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0207153_42	1408437.JNJN01000002_gene1390	387.0	0	N/A	N/A
structural_annotation	UHGV-0207153_42	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_43	phrog_156	123.6	1.4e-36	portal protein	head and packaging
structural_annotation	UHGV-0207153_43	PF12236,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_45	phrog_13518	89.9	1.6e-26	N/A	unknown function
structural_annotation	UHGV-0207153_46	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0207153_47	phrog_24896	75.6	2.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-0207153_47	657322.FPR_22010	157.0	4.55e-38	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0207153	Yes	34,850	60	90	1