vOTU vOTU-090152

vOTU: vOTU-090152

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-090152
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00920 → vGENUS-01002 → vOTU-090152
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0122973
Biosample ID	SAMN00715220
Genome length (bp)	22,022 bps
CheckV completeness	66.96% (Medium-quality)
CDS count	30
CDS density	92.87%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	3	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Clostridium_A → Clostridium_A leptum	Total connections	47	Host agreement	87.23

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 66.96)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0122973_3	UniRef90_A0A357NGY1	89.4	4.36e-22	XRE family transcriptional regulator	N/A
structural_annotation	UHGV-0122973_3	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0122973_4	K22299	62.8	8e-18	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0122973_4	phrog_8	58.2	1.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0122973_4	UniRef90_UPI000F62FEE7	114.0	3.25e-30	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0122973_4	742740.HMPREF9474_04360	114.0	6.3e-31	Pou domain - N-terminal to homeobox domain	N/A
Pfam	UHGV-0122973_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0122973_4	COG1395	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-0122973_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0122973_7	K06400	352.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0122973_7	phrog_95	345.7	0	integrase	integration and excision
UniRef90	UHGV-0122973_7	UniRef90_C0ECX6	504.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0122973_7	537013.CLOSTMETH_01697	504.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0122973_7	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0122973_7	PF07508	N/A	N/A	Recombinase	Recombinase
COG	UHGV-0122973_7	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0122973_7	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_10	phrog_297	56.0	7.4e-16	holin	lysis
UniRef90	UHGV-0122973_10	UniRef90_A7VT88	183.0	0	Holin, phage phi LC3 family	N/A
eggNOG-mapper	UHGV-0122973_10	428125.CLOLEP_00169	183.0	0	COG COG5546 Small integral membrane protein	N/A
Pfam	UHGV-0122973_10	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-0122973_10	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-0122973_10	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0122973_10	COG5546	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_11	phrog_937	81.2	1.3e-23	hemolysin	other
eggNOG-mapper	UHGV-0122973_11	428125.CLOLEP_00170	224.0	0	N/A	N/A
KOfam	UHGV-0122973_12	K07273	220.4	0	acm; lysozyme	N/A
PHROG	UHGV-0122973_12	phrog_291	173.9	0	endolysin	lysis
UniRef90	UHGV-0122973_12	UniRef90_A0A1C5NS63	303.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0122973_12	428125.CLOLEP_00561	325.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0122973_12	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0122973_12	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0122973_12	PF01183,TIGR04303,COG3757,COG5492	N/A	N/A	N/A	N/A
UniRef90	UHGV-0122973_13	UniRef90_R6NDD3	96.3	9.71e-25	Glycosyl hydrolase family 25	N/A
structural_annotation	UHGV-0122973_13	PF02796,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_14	phrog_7121	179.5	0	tail fiber protein	tail
UniRef90	UHGV-0122973_14	UniRef90_A7VT91	514.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0122973_14	428125.CLOLEP_00172	524.0	0	COG COG5295 Autotransporter adhesin	N/A
Pfam	UHGV-0122973_14	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
PHROG	UHGV-0122973_15	phrog_19280	51.6	0.0000000000000079	N/A	unknown function
UniRef90	UHGV-0122973_15	UniRef90_A0A412AXT4	373.0	0	N/A	N/A
eggNOG-mapper	UHGV-0122973_15	428125.CLOLEP_02045	202.0	0	N/A	N/A
Pfam	UHGV-0122973_15	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
PHROG	UHGV-0122973_16	phrog_1067	415.0	0	minor head protein	head and packaging
UniRef90	UHGV-0122973_16	UniRef90_A0A1C6H6B4	1006.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0122973_16	1123263.AUKY01000068_gene489	431.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0122973_16	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0122973_16	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0122973_16	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0122973_16	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_17	phrog_33	82.2	1.1e-23	distal tail protein Dit	tail
UniRef90	UHGV-0122973_17	UniRef90_A0A1C6H6D2	484.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0122973_17	1160721.RBI_I01575	160.0	0	Phage tail protein	N/A
COG	UHGV-0122973_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0122973_17	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_18	phrog_23464	268.3	0	N/A	unknown function
UniRef90	UHGV-0122973_18	UniRef90_A0A1C6H5M9	1019.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-0122973_18	33035.JPJF01000023_gene3232	285.0	0	phage tail tape measure protein	N/A
COG	UHGV-0122973_18	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0122973_18	PF20155,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_19	phrog_3033	49.4	0.000000000000071	N/A	unknown function
eggNOG-mapper	UHGV-0122973_19	1280671.AUJH01000012_gene3142	52.4	0.0000000175	N/A	N/A
PHROG	UHGV-0122973_20	phrog_709	118.3	4.3e-35	N/A	unknown function
eggNOG-mapper	UHGV-0122973_20	411471.SUBVAR_05858	139.0	9.48006e-41	N/A	N/A
structural_annotation	UHGV-0122973_20	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_21	phrog_88	163.0	0	major tail protein	tail
UniRef90	UHGV-0122973_21	UniRef90_A0A1C6H6F0	381.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0122973_21	1226322.HMPREF1545_00121	191.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0122973_21	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0122973_21	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_22	phrog_78	50.4	0.000000000000045	tail terminator	connector
UniRef90	UHGV-0122973_22	UniRef90_U2SBX3	105.0	1.41e-27	HTH merR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0122973_22	411471.SUBVAR_05856	123.0	3.37e-35	N/A	N/A
structural_annotation	UHGV-0122973_22	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_23	phrog_5	63.4	5.5e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-0122973_23	UniRef90_A0A8J6PH82	189.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0122973_23	411471.SUBVAR_05855	134.0	5.43e-39	N/A	N/A
Pfam	UHGV-0122973_23	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0122973_23	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_24	phrog_1951	93.9	1.1e-27	head-tail adaptor	connector
UniRef90	UHGV-0122973_24	UniRef90_A0A2V2GSS5	128.0	2.17e-36	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0122973_24	411471.SUBVAR_05854	85.1	2.75e-20	N/A	N/A
structural_annotation	UHGV-0122973_24	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_25	phrog_2550	89.8	1.5e-26	N/A	unknown function
UniRef90	UHGV-0122973_25	UniRef90_R5V091	74.3	0.00000000000000191	Phage related protein	N/A
eggNOG-mapper	UHGV-0122973_25	1226322.HMPREF1545_00117	123.0	1.09e-35	N/A	N/A
structural_annotation	UHGV-0122973_25	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_26	phrog_10	210.0	0	major head protein	head and packaging
UniRef90	UHGV-0122973_26	UniRef90_A0A1C6H720	933.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0122973_26	1226322.HMPREF1545_00116	667.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0122973_26	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0122973_26	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0122973_26	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0122973_26	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0122973_26	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0122973_27	K06904	147.8	9.94922e-44	N/A	N/A
PHROG	UHGV-0122973_27	phrog_80	171.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0122973_27	UniRef90_A0A1C6H687	401.0	0	Phage prohead protease, HK97 family	N/A
eggNOG-mapper	UHGV-0122973_27	1226322.HMPREF1545_00115	251.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0122973_27	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0122973_27	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0122973_27	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0122973_27	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_28	phrog_12	175.9	0	portal protein	head and packaging
UniRef90	UHGV-0122973_28	UniRef90_A0A1C6H763	805.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0122973_28	1226322.HMPREF1545_00114	560.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0122973_28	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0122973_28	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0122973_28	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0122973_28	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_29	phrog_9	298.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-0122973_29	UniRef90_A0A0D8IV16	1088.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0122973_29	1226322.HMPREF1545_00113	894.0	0	Phage Terminase	N/A
Pfam	UHGV-0122973_29	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0122973_29	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0122973_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0122973_29	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0122973_30	phrog_361	59.6	6.2e-17	terminase small subunit	head and packaging
UniRef90	UHGV-0122973_30	UniRef90_A0A1C6H6I9	200.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0122973_30	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
COG	UHGV-0122973_30	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0122973_30	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0122973	Yes	22,022	45	67	1