vOTU vOTU-090316

vOTU: vOTU-090316

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-090316
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00213 → vGENUS-00449 → vOTU-090316
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0087898
Biosample ID	SAMEA3449251
Genome length (bp)	25,068 bps
CheckV completeness	58.73% (Medium-quality)
CDS count	26
CDS density	91.62%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	46	Host agreement	82.61
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	18	Host agreement	83.33

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 58.73)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0087898_1	phrog_1357	48.7	0.00000000000011	major head protein	head and packaging
UniRef90	UHGV-0087898_1	UniRef90_A0A7G6E8J7	165.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0087898_1	1449126.JQKL01000003_gene1695	165.0	0	N/A	N/A
NCBIFam	UHGV-0087898_1	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
PHROG	UHGV-0087898_2	phrog_15239	88.3	4.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0087898_2	1449126.JQKL01000003_gene1694	51.6	0.00000193	N/A	N/A
KOfam	UHGV-0087898_3	K07296	40.5	0.000000000027	ADIPOQ, ACDC; adiponectin	N/A
PHROG	UHGV-0087898_3	phrog_8745	44.9	0.00000000000038	tail fiber protein	tail
Pfam	UHGV-0087898_3	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0087898_3	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0087898_4	1408437.JNJN01000002_gene1389	58.9	0.000000897	N/A	N/A
Pfam	UHGV-0087898_4	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-0087898_4	PF04862,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-0087898_5	phrog_4105	99.6	1.9e-29	N/A	unknown function
UniRef90	UHGV-0087898_5	UniRef90_A0A8D9UHA9	144.0	9.58488e-43	Holin protein	N/A
eggNOG-mapper	UHGV-0087898_5	742733.HMPREF9469_05011	120.0	7.31e-34	N/A	N/A
PHROG	UHGV-0087898_6	phrog_881	90.3	1.1e-26	holin	lysis
UniRef90	UHGV-0087898_6	UniRef90_UPI00189D3A4F	85.1	2.28e-20	phage holin	N/A
eggNOG-mapper	UHGV-0087898_6	742740.HMPREF9474_02251	82.0	7.04e-20	Putative phage holin Dp-1	N/A
Pfam	UHGV-0087898_6	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0087898_6	PF16938	N/A	N/A	N/A	N/A
KOfam	UHGV-0087898_7	K01448	49.0	0.000000000000094	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0087898_7	phrog_1493	73.1	5e-21	endolysin	lysis
UniRef90	UHGV-0087898_7	UniRef90_A0A3D5TEB1	202.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0087898_7	742738.HMPREF9460_01415	81.6	0.00000000000000155	Bacterial SH3 domain	N/A
Pfam	UHGV-0087898_7	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0087898_7	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0087898_7	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0087898_7	PF01520,PF01471,MF_00562,TIGR02883,TIGR03979,COG0860,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0087898_8	phrog_12105	83.9	7.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0087898_8	1226322.HMPREF1545_03850	58.2	0.00000000326	N/A	N/A
PHROG	UHGV-0087898_9	phrog_511	229.8	0	internal virion protein	head and packaging
UniRef90	UHGV-0087898_9	UniRef90_A0A8D9UH72	796.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-0087898_9	1226322.HMPREF1545_00785	306.0	0	N/A	N/A
structural_annotation	UHGV-0087898_9	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-0087898_10	UniRef90_A0A8D9UGT1	98.2	4.4e-24	Sigma C capsid protein	N/A
eggNOG-mapper	UHGV-0087898_11	1410650.JHWL01000003_gene2815	68.6	0.000000000756	N/A	N/A
PHROG	UHGV-0087898_12	phrog_22978	937.2	0	N/A	unknown function
UniRef90	UHGV-0087898_12	UniRef90_A0A1Y4WLF7	1002.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0087898_12	1410650.JHWL01000003_gene2814	575.0	0	N/A	N/A
Pfam	UHGV-0087898_12	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
PHROG	UHGV-0087898_13	phrog_3754	92.5	4.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-0087898_13	476272.RUMHYD_01764	160.0	0	N/A	N/A
PHROG	UHGV-0087898_14	phrog_21718	101.8	6.7e-30	N/A	unknown function
eggNOG-mapper	UHGV-0087898_14	397290.C810_05210	75.1	0.00000000000000487	N/A	N/A
PHROG	UHGV-0087898_15	phrog_22984	82.8	3.4e-24	N/A	unknown function
PHROG	UHGV-0087898_16	phrog_16490	140.6	8.50028e-42	N/A	unknown function
eggNOG-mapper	UHGV-0087898_16	1408437.JNJN01000043_gene803	140.0	1.61e-38	N/A	N/A
PHROG	UHGV-0087898_17	phrog_20016	204.8	0	N/A	unknown function
UniRef90	UHGV-0087898_17	UniRef90_A0A285PT46	193.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0087898_17	397290.C810_05214	171.0	0	N/A	N/A
structural_annotation	UHGV-0087898_17	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0087898_18	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0087898_19	K00059	334.2	0	fabG, OAR1; 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	N/A
PHROG	UHGV-0087898_19	phrog_3142	175.0	0	FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0087898_19	UniRef90_A0A1Q6RA05	468.0	0	3-ketoacyl-ACP reductase	N/A
eggNOG-mapper	UHGV-0087898_19	1519439.JPJG01000005_gene1036	325.0	0	KR domain	N/A
Pfam	UHGV-0087898_19	PF13561	N/A	N/A	Enoyl-(Acyl carrier protein) reductase	adh_short_C2
NCBIFam	UHGV-0087898_19	NF009466.0	N/A	N/A	3-oxoacyl-ACP reductase FabG	N/A
COG	UHGV-0087898_19	COG1028	N/A	N/A	NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family	N/A
structural_annotation	UHGV-0087898_19	PF13561,MF_01647,NF004198,COG1028	N/A	N/A	N/A	N/A
KOfam	UHGV-0087898_20	K01356	71.2	2e-20	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0087898_20	phrog_4	118.1	8.6e-35	transcriptional repressor	transcription regulation
UniRef90	UHGV-0087898_20	UniRef90_A0A1Q6RA16	501.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0087898_20	693746.OBV_02600	319.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0087898_20	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0087898_20	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0087898_20	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0087898_20	PF00717,PF01381,MF_00015,NF007621,NF041951,COG2932	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0087898_21	1122599.AUGR01000027_gene1270	64.3	0.0000000000104	N/A	N/A
eggNOG-mapper	UHGV-0087898_22	1226322.HMPREF1545_00598	74.7	5.47e-16	N/A	N/A
KOfam	UHGV-0087898_23	K03090	46.5	0.00000000000056	sigB; RNA polymerase sigma-B factor	N/A
UniRef90	UHGV-0087898_23	UniRef90_A0A350TJ36	179.0	0	RNA polymerase subunit sigma-70	N/A
eggNOG-mapper	UHGV-0087898_23	1226322.HMPREF1545_00599	87.4	2.76e-21	Helix-turn-helix domain	N/A
Pfam	UHGV-0087898_23	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
NCBIFam	UHGV-0087898_23	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0087898_23	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
structural_annotation	UHGV-0087898_23	PF08281,MF_00245,TIGR02989,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0087898_26	phrog_34276	95.3	6.2e-28	N/A	unknown function
UniRef90	UHGV-0087898_26	UniRef90_A0A3D2IB15	526.0	0	YitT family protein	N/A
eggNOG-mapper	UHGV-0087898_26	1519439.JPJG01000014_gene74	305.0	0	N/A	N/A
Pfam	UHGV-0087898_26	PF02588	N/A	N/A	Uncharacterised 5xTM membrane BCR, YitT family COG1284	YitT_membrane
Pfam	UHGV-0087898_26	PF10035	N/A	N/A	N/A	DUF2179
COG	UHGV-0087898_26	COG1284	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0087898_26	PF02588,PF10035,MF_01515,NF003191,COG1284	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0087898	Yes	25,068	58	59	1