vOTU vOTU-090783

vOTU: vOTU-090783

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-090783
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00162 → vSUBFAM-02493 → vGENUS-03069 → vOTU-090783
Host lineage
Host range breadth
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1385051
Biosample ID	SAMEA2738175
Genome length (bp)	23,366 bps
CheckV completeness	75.36% (Medium-quality)
CDS count	42
CDS density	88.67%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 75.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1385051_1	K14059	161.6	0	int; integrase	N/A
PHROG	UHGV-1385051_1	phrog_1	177.0	0	integrase	integration and excision
UniRef90	UHGV-1385051_1	UniRef90_A0A2S0L5I5	580.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1385051_1	936375.HMPREF1152_1040	452.0	0	Phage integrase family	N/A
Pfam	UHGV-1385051_1	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1385051_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1385051_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1385051_1	PF00589,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_2	phrog_5783	263.7	0	N/A	unknown function
UniRef90	UHGV-1385051_2	UniRef90_UPI0010308ECD	254.0	0	NYN domain-containing protein	N/A
eggNOG-mapper	UHGV-1385051_2	445971.ANASTE_00686	248.0	0	NYN domain	N/A
Pfam	UHGV-1385051_2	PF01936	N/A	N/A	NYN domain	NYN
COG	UHGV-1385051_2	COG1432	N/A	N/A	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	N/A
structural_annotation	UHGV-1385051_2	PF01936,TIGR00288,COG1432	N/A	N/A	N/A	N/A
UniRef90	UHGV-1385051_3	UniRef90_A0A086ZQY8	63.2	0.000000000752	Putative lipoprotein	N/A
eggNOG-mapper	UHGV-1385051_3	1105029.HMPREF1137_1911	63.5	0.000000000105	N/A	N/A
structural_annotation	UHGV-1385051_3	PF11631,TIGR03066	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1385051_4	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-1385051_5	K22300	62.6	8.8e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1385051_5	phrog_8	75.5	9.5e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1385051_5	UniRef90_UPI001D05EDBA	160.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1385051_5	1111454.HMPREF1250_1028	105.0	1.04e-27	carbohydrate binding	N/A
PADLOC	UHGV-1385051_5	retron_type_VI_hth_cluster2_1	48.1	0.00000000000029	N/A	Retron
Pfam	UHGV-1385051_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1385051_5	COG2390	N/A	N/A	DNA-binding transcriptional regulator LsrR, DeoR family	N/A
structural_annotation	UHGV-1385051_5	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1385051_6	K07729	47.1	0.00000000000051	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-1385051_6	phrog_8	42.5	0.000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-1385051_6	UniRef90_UPI000C765EF4	73.6	8.23e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1385051_6	546275.FUSPEROL_02064	63.5	0.00000000000216	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1385051_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1385051_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1385051_7	NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_19	phrog_2245	61.3	1.6e-17	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1385051_19	UniRef90_A0A2S0L5I7	106.0	5.1e-28	MazG domain-containing protein	N/A
Pfam	UHGV-1385051_19	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
PHROG	UHGV-1385051_20	phrog_236	100.5	3.1e-29	nucleotide kinase	other
UniRef90	UHGV-1385051_20	UniRef90_A0A496NN13	88.2	3.54e-20	N/A	N/A
eggNOG-mapper	UHGV-1385051_20	936375.HMPREF1152_1061	89.4	7.52e-21	N/A	N/A
Pfam	UHGV-1385051_20	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-1385051_20	PF11753	N/A	N/A	N/A	N/A
KOfam	UHGV-1385051_21	K00558	228.2	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1385051_21	phrog_116	249.6	0	DNA methyltransferase	other
UniRef90	UHGV-1385051_21	UniRef90_UPI00046534C2	503.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1385051_21	759913.SDSE_1517	369.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1385051_21	MTase_II_00058	226.0	0	Type II methyltransferase	RM
Pfam	UHGV-1385051_21	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1385051_21	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1385051_21	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1385051_21	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1385051_24	K03111	145.9	4.2039e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1385051_24	phrog_44	142.7	2.20004e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1385051_24	UniRef90_A0A2S0L5J3	267.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1385051_24	936375.HMPREF1152_1764	211.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1385051_24	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1385051_24	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1385051_24	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1385051_24	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1385051_24	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_25	phrog_33451	53.5	0.0000000000000014	N/A	unknown function
PHROG	UHGV-1385051_26	phrog_3584	167.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1385051_26	UniRef90_A0A1I5LZL1	132.0	8.98e-34	Relaxase/Mobilisation nuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-1385051_26	936375.HMPREF1152_0670	341.0	0	N/A	N/A
structural_annotation	UHGV-1385051_26	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_27	phrog_36	82.6	5.3e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-1385051_27	UniRef90_J5WFY5	143.0	5.87999e-41	PF07374 family protein	N/A
eggNOG-mapper	UHGV-1385051_27	658655.HMPREF0988_02569	58.2	0.0000000154	sigma factor activity	N/A
COG	UHGV-1385051_27	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-1385051_27	PF07374,MF_00674,NF007227,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_28	phrog_21498	271.1	0	N/A	unknown function
UniRef90	UHGV-1385051_28	UniRef90_C7MM70	317.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-1385051_28	469378.Ccur_02830	317.0	0	DNA binding	N/A
PADLOC	UHGV-1385051_28	MTase_II_00015	72.4	7.3e-21	Type II methyltransferase	RM
Pfam	UHGV-1385051_28	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1385051_28	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1385051_28	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG5119	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_29	phrog_309	133.1	1.3e-39	terminase small subunit	head and packaging
UniRef90	UHGV-1385051_29	UniRef90_UPI00138A20ED	122.0	7.54e-33	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1385051_29	649747.HMPREF0083_05320	108.0	7.55e-28	transposase activity	N/A
COG	UHGV-1385051_29	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-1385051_29	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_30	phrog_4581	107.8	1e-31	terminase small subunit	head and packaging
UniRef90	UHGV-1385051_30	UniRef90_A0A0U1L0W9	200.0	0	Prophage LambdaBa04, Gp54	N/A
eggNOG-mapper	UHGV-1385051_30	1123288.SOV_2c03680	200.0	0	adenylate kinase activity	N/A
Pfam	UHGV-1385051_30	PF01844	N/A	N/A	HNH endonuclease	HNH
Pfam	UHGV-1385051_30	PF13671	N/A	N/A	AAA domain	AAA_33
COG	UHGV-1385051_30	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-1385051_30	PF13671,MF_03171,NF005251,NF008448,COG4639	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1385051_31	1123288.SOV_2c03670	52.0	0.00000054	N/A	N/A
structural_annotation	UHGV-1385051_31	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_32	phrog_9	310.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1385051_32	UniRef90_A0A1M6DQA4	557.0	0	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
eggNOG-mapper	UHGV-1385051_32	1123288.SOV_2c03650	478.0	0	Phage Terminase	N/A
Pfam	UHGV-1385051_32	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1385051_32	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1385051_32	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1385051_32	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_33	phrog_12	127.8	7.8e-38	portal protein	head and packaging
UniRef90	UHGV-1385051_33	UniRef90_A0A1M6DQ94	397.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1385051_33	1123288.SOV_2c03640	379.0	0	Phage portal protein	N/A
Pfam	UHGV-1385051_33	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1385051_33	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1385051_33	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1385051_34	K06904	127.8	1.1e-37	N/A	N/A
PHROG	UHGV-1385051_34	phrog_80	129.4	4.3e-38	head maturation protease	head and packaging
UniRef90	UHGV-1385051_34	UniRef90_A0A892APL8	211.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-1385051_34	457396.CSBG_01048	210.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-1385051_34	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-1385051_34	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-1385051_34	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-1385051_34	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_35	phrog_10	90.9	1.9e-26	major head protein	head and packaging
UniRef90	UHGV-1385051_35	UniRef90_A0A7G9W8B7	187.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1385051_35	293826.Amet_2414	177.0	0	Phage capsid family	N/A
Pfam	UHGV-1385051_35	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1385051_35	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-1385051_35	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_37	phrog_32328	89.0	4.3e-26	N/A	unknown function
structural_annotation	UHGV-1385051_37	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1385051_39	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_40	phrog_88	117.1	1.2e-34	major tail protein	tail
UniRef90	UHGV-1385051_40	UniRef90_A0A373ZCY5	116.0	4.62e-29	Phage tail protein	N/A
eggNOG-mapper	UHGV-1385051_40	1111134.HMPREF1253_0377	99.8	1.2e-23	Phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1385051_40	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1385051_40	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_41	phrog_709	71.8	9.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1385051_41	1122146.AUHP01000010_gene1064	62.8	0.0000000000787	N/A	N/A
structural_annotation	UHGV-1385051_41	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1385051_42	phrog_15002	90.2	6.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-1385051_42	1123263.AUKY01000046_gene477	86.7	1.36e-16	Phage tail tape measure protein, TP901 family	N/A
COG	UHGV-1385051_42	COG5280	N/A	N/A	Phage-related minor tail protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1385051	Yes	23,366	41	75	1