vOTU vOTU-091263

vOTU: vOTU-091263

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-091263
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00134 → vGENUS-00673 → vOTU-091263
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E sp003526955
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0029527
Biosample ID	SAMEA4766226
Genome length (bp)	24,379 bps
CheckV completeness	69.29% (Medium-quality)
CDS count	36
CDS density	95.46%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E → Ruminococcus_E sp003526955	Total connections	445	Host agreement	78.2
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Ruminococcus_E	Total connections	6	Host agreement	83.33

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 69.29)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0029527_1	UniRef90_A0A1C6HHE5	75.1	0.00000000000318	BppU_N domain-containing protein	N/A
structural_annotation	UHGV-0029527_1	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_2	phrog_1067	103.3	2.4e-30	minor head protein	head and packaging
UniRef90	UHGV-0029527_2	UniRef90_A0A1G5CPD2	161.0	3.37012e-42	Phage minor structural protein, N-terminal region	N/A
eggNOG-mapper	UHGV-0029527_2	1567011.A0A0A7RUI9_9VIRU	81.3	0.0000000000000822	N-acetylmuramoyl-L-alanine amidase activity	N/A
NCBIFam	UHGV-0029527_2	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
structural_annotation	UHGV-0029527_2	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_3	phrog_33	66.0	8.9e-19	distal tail protein Dit	tail
UniRef90	UHGV-0029527_3	UniRef90_A0A0A8WHP7	71.6	0.0000000000338	Putative Tail component protein	N/A
eggNOG-mapper	UHGV-0029527_3	1582149.A0A0A8WHP7_9CAUD	71.6	0.00000000000567	Phage tail protein	N/A
structural_annotation	UHGV-0029527_3	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0029527_4	K20283	49.1	0.000000000000014	GOLGA4; golgin subfamily A member 4	N/A
PHROG	UHGV-0029527_4	phrog_5218	247.3	0	N/A	unknown function
UniRef90	UHGV-0029527_4	UniRef90_UPI000E474EFE	649.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0029527_4	1235792.C808_03050	254.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0029527_4	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0029527_4	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0029527_4	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029527_6	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_7	phrog_88	61.8	1e-17	major tail protein	tail
UniRef90	UHGV-0029527_7	UniRef90_A0A1G5CNS8	172.0	0	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0029527_7	411470.RUMGNA_02319	60.8	0.00000000763	COG NOG11304 non supervised orthologous group	N/A
NCBIFam	UHGV-0029527_7	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0029527_7	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029527_8	UniRef90_UPI000E5564A4	171.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0029527_8	1118057.CAGX01000043_gene486	67.4	0.00000000000173	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-0029527_8	TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0029527_9	698758.AXY_02180	61.2	0.000000000111	N/A	N/A
structural_annotation	UHGV-0029527_9	PF05657,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_10	phrog_19734	65.8	5.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0029527_10	86416.Clopa_0343	55.5	0.0000000266	N/A	N/A
structural_annotation	UHGV-0029527_10	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_11	phrog_749	51.0	0.000000000000022	N/A	unknown function
UniRef90	UHGV-0029527_11	UniRef90_A0A1G5CMX8	103.0	7.08e-27	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0029527_11	349161.Dred_2603	55.5	0.0000000128	N/A	N/A
PHROG	UHGV-0029527_12	phrog_10	112.7	3.6e-33	major head protein	head and packaging
UniRef90	UHGV-0029527_12	UniRef90_A0A412ULW9	576.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0029527_12	1211817.CCAT010000053_gene2132	325.0	0	Phage capsid family	N/A
Pfam	UHGV-0029527_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0029527_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0029527_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0029527_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0029527_13	K01358	144.3	1.10002e-42	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0029527_13	phrog_94	211.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0029527_13	UniRef90_A0A412ULU1	393.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0029527_13	86416.Clopa_0340	171.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0029527_13	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0029527_13	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0029527_13	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_14	phrog_12	99.1	3.4e-29	portal protein	head and packaging
UniRef90	UHGV-0029527_14	UniRef90_A0A412ULV9	570.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0029527_14	1415774.U728_1254	269.0	0	Phage portal protein	N/A
Pfam	UHGV-0029527_14	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0029527_14	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0029527_14	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0029527_14	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_15	phrog_9	286.1	0	terminase large subunit	head and packaging
UniRef90	UHGV-0029527_15	UniRef90_A0A412UM03	986.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0029527_15	86416.Clopa_0337	622.0	0	Phage Terminase	N/A
Pfam	UHGV-0029527_15	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0029527_15	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0029527_15	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0029527_15	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_16	phrog_5110	82.8	2.9e-24	terminase small subunit	head and packaging
UniRef90	UHGV-0029527_16	UniRef90_UPI00057D0A7C	113.0	1.2e-30	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0029527_16	86416.Clopa_0336	103.0	1.27e-27	N/A	N/A
Pfam	UHGV-0029527_16	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0029527_16	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_17	phrog_119	72.8	4.8e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0029527_17	UniRef90_A0A412ULY9	182.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0029527_17	1405.DJ92_863	87.0	6.57e-21	HNH endonuclease	N/A
Pfam	UHGV-0029527_17	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0029527_17	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
eggNOG-mapper	UHGV-0029527_18	1304880.JAGB01000002_gene2225	53.1	0.000000494	N/A	N/A
structural_annotation	UHGV-0029527_18	TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_20	phrog_3584	156.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0029527_20	1235800.C819_00515	88.6	3.43e-18	N/A	N/A
structural_annotation	UHGV-0029527_20	PF21578,NF041486	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_22	phrog_824	100.0	1.7e-29	N/A	unknown function
UniRef90	UHGV-0029527_22	UniRef90_A0A1G5CM57	142.0	2.74935e-42	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0029527_22	397288.C806_00096	119.0	2.22e-33	VRR_NUC	N/A
PHROG	UHGV-0029527_23	phrog_24518	81.6	8.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0029527_23	1519439.JPJG01000077_gene922	103.0	5.77e-25	N/A	N/A
PHROG	UHGV-0029527_25	phrog_15609	109.5	1.3e-35	N/A	unknown function
UniRef90	UHGV-0029527_25	UniRef90_A0A373SLQ6	105.0	3.81e-22	N/A	N/A
eggNOG-mapper	UHGV-0029527_25	1514668.JOOA01000001_gene225	73.9	0.00000000000728	N/A	N/A
structural_annotation	UHGV-0029527_25	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_26	phrog_8470	226.2	0	N/A	unknown function
UniRef90	UHGV-0029527_26	UniRef90_A0A1I4ZKY0	182.0	1.4013e-45	PcfJ-like protein	N/A
eggNOG-mapper	UHGV-0029527_26	397291.C804_06548	162.0	2.93e-39	PcfJ-like protein	N/A
Pfam	UHGV-0029527_26	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0029527_26	PF14284	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0029527_31	COG1862	N/A	N/A	N/A	N/A
UniRef90	UHGV-0029527_32	UniRef90_UPI0005510EBF	65.9	0.00000000000163	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-0029527_33	PF11614,TIGR02588,COG2847	N/A	N/A	N/A	N/A
PHROG	UHGV-0029527_34	phrog_585	110.3	1.3e-32	N/A	unknown function
UniRef90	UHGV-0029527_34	UniRef90_A0A851IGZ3	130.0	1.95e-36	N/A	N/A
eggNOG-mapper	UHGV-0029527_34	1033744.CAEL01000029_gene1306	124.0	3.07e-34	N/A	N/A
Pfam	UHGV-0029527_34	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0029527_34	PF10711,MF_01819,TIGR03433,COG3432	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0029527	Yes	24,379	38	69	1