vOTU vOTU-092270

vOTU: vOTU-092270

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-092270
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00156 → vSUBFAM-01737 → vGENUS-05096 → vOTU-092270
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → CAG-353 → CAG-353 sp900066885
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0178480
Biosample ID	SAMN06233224
Genome length (bp)	23,001 bps
CheckV completeness	67.12% (Medium-quality)
CDS count	37
CDS density	93.71%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → CAG-353 → CAG-353 sp900066885	Total connections	112	Host agreement	94.64
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → CAG-353 → CAG-353 sp900066885	Total connections	118	Host agreement	99.15

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 67.12)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0178480_2	phrog_87	69.7	3.9e-20	metallo-protease	other
UniRef90	UHGV-0178480_2	UniRef90_A0A374HVM5	128.0	1.9e-35	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0178480_2	1007096.BAGW01000011_gene2354	102.0	5.41e-26	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0178480_2	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0178480_2	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0178480_2	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0178480_3	K22300	45.2	0.0000000000018	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0178480_3	phrog_8	64.7	2.2e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0178480_3	UniRef90_A0A1C6CX10	77.8	4.85e-17	Helix-turn-helix domain	N/A
eggNOG-mapper	UHGV-0178480_3	665950.HMPREF1025_00892	58.5	0.00000000313	N/A	N/A
Pfam	UHGV-0178480_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0178480_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0178480_4	K07741	94.4	3e-27	antB; anti-repressor protein	N/A
PHROG	UHGV-0178480_4	phrog_130	279.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0178480_4	UniRef90_UPI0018C83C49	379.0	0	phage antirepressor	N/A
eggNOG-mapper	UHGV-0178480_4	1123315.AUIP01000001_gene1408	354.0	0	Antirepressor	N/A
Pfam	UHGV-0178480_4	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0178480_4	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0178480_4	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0178480_4	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178480_6	MF_00273	N/A	N/A	N/A	N/A
KOfam	UHGV-0178480_9	K00390	98.1	1.1e-29	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0178480_9	phrog_424	103.2	9.7e-31	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0178480_9	UniRef90_UPI001D091C0C	689.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0178480_9	1291050.JAGE01000002_gene3264	358.0	0	sulfate reduction	N/A
Pfam	UHGV-0178480_9	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0178480_9	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0178480_9	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_10	phrog_561	150.5	8.40779e-45	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178480_10	UniRef90_UPI0011C8A287	243.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0178480_10	33035.JPJF01000071_gene4462	219.0	0	N/A	N/A
structural_annotation	UHGV-0178480_10	PF03837,TIGR01913	N/A	N/A	N/A	N/A
KOfam	UHGV-0178480_11	K03546	41.6	0.0000000000053	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0178480_11	phrog_1499	292.5	0	N/A	unknown function
UniRef90	UHGV-0178480_11	UniRef90_A0A1C6FNE5	902.0	0	Chromosome segregation protein	N/A
eggNOG-mapper	UHGV-0178480_11	1120998.AUFC01000030_gene2215	612.0	0	DNA recombination	N/A
Pfam	UHGV-0178480_11	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0178480_11	COG0497	N/A	N/A	DNA repair ATPase RecN	N/A
structural_annotation	UHGV-0178480_11	PF11398,MF_00365,NF008121,COG0497	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_12	phrog_1227	253.4	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178480_12	UniRef90_UPI00041F978E	296.0	0	PD-(D/E)XK nuclease-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0178480_12	1120998.AUFC01000030_gene2216	296.0	0	N/A	N/A
Pfam	UHGV-0178480_12	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0178480_12	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0178480_12	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_13	phrog_3490	149.3	1.82169e-44	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178480_13	UniRef90_A0A1C6FNL5	311.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0178480_13	357809.Cphy_2986	181.0	0	N/A	N/A
Pfam	UHGV-0178480_13	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0178480_13	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0178480_14	K03111	114.9	1.2e-33	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0178480_14	phrog_44	126.4	2.3e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0178480_14	UniRef90_A0A1C6FN64	253.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0178480_14	1410670.JHXF01000008_gene806	150.0	1.54143e-44	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0178480_14	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0178480_14	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0178480_14	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0178480_14	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0178480_14	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_15	phrog_19415	74.0	6.1e-22	N/A	unknown function
UniRef90	UHGV-0178480_15	UniRef90_A0A1C6FNF0	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-0178480_15	33035.JPJF01000071_gene4467	76.3	0.000000000000122	N/A	N/A
Pfam	UHGV-0178480_15	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0178480_15	PF19808	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178480_17	PF11483	N/A	N/A	N/A	N/A
KOfam	UHGV-0178480_19	K19779	44.2	0.0000000000031	ralR; endodeoxyribonuclease RalR [EC:3.1.-.-]	N/A
PHROG	UHGV-0178480_19	phrog_599	51.9	0.000000000000018	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0178480_19	UniRef90_UPI0004832917	72.0	0.00000000000000893	Lar family restriction alleviation protein	N/A
Pfam	UHGV-0178480_19	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0178480_19	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
dbAPIS	UHGV-0178480_19	APIS033	N/A	N/A	Lar is functionally similar to RaI, is able to alleviate restriction and enhance modification by EcoKI. And the nucleotide sequences of their genes share 47% identity, indicating a common origin.	N/A
structural_annotation	UHGV-0178480_19	PF14354,TIGR03655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178480_20	610130.Closa_0421	79.0	6.96e-19	N/A	N/A
structural_annotation	UHGV-0178480_20	PF18350,NF002745,COG2139	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_21	phrog_22543	45.8	0.00000000000077	N/A	unknown function
UniRef90	UHGV-0178480_21	UniRef90_A0A8D9PDT5	62.4	0.0000000002	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-0178480_22	phrog_8684	91.7	7.1e-27	N/A	unknown function
UniRef90	UHGV-0178480_22	UniRef90_A0A1C6FN30	194.0	0	YopX protein	N/A
eggNOG-mapper	UHGV-0178480_22	742767.HMPREF9456_02048	86.7	9.31e-20	YopX protein	N/A
Pfam	UHGV-0178480_22	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0178480_22	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0178480_22	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_23	phrog_36	65.7	8.4e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0178480_23	UniRef90_UPI0010538756	53.5	0.00000334	N/A	N/A
eggNOG-mapper	UHGV-0178480_23	1200567.JNKD01000011_gene654	52.0	0.00000161	sigma factor activity	N/A
Pfam	UHGV-0178480_23	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0178480_23	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0178480_23	PF07374,MF_00245,TIGR02980,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0178480_24	K06909	404.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0178480_24	phrog_3717	154.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0178480_24	UniRef90_A0A1C6GFY7	1051.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0178480_24	411461.DORFOR_01162	593.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0178480_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0178480_24	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0178480_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0178480_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0178480_24	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_25	phrog_533	342.0	0	portal protein	head and packaging
UniRef90	UHGV-0178480_25	UniRef90_A0A1C6GG74	874.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0178480_25	642492.Clole_0815	347.0	0	N/A	N/A
Pfam	UHGV-0178480_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0178480_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_26	phrog_581	345.5	0	minor head protein	head and packaging
UniRef90	UHGV-0178480_26	UniRef90_A0A1C6GGW2	752.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0178480_26	1292035.H476_1017	329.0	0	N/A	N/A
Pfam	UHGV-0178480_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0178480_26	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0178480_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178480_26	PF06152,PF15542	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178480_27	PF11607,MF_01077,NF037951,COG4568	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_28	phrog_194	103.0	3.5e-30	head scaffolding protein	head and packaging
UniRef90	UHGV-0178480_28	UniRef90_A0A1C6GGD5	332.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0178480_28	411490.ANACAC_00778	122.0	3.3e-32	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0178480_28	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0178480_28	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_29	phrog_422	227.3	0	major head protein	head and packaging
UniRef90	UHGV-0178480_29	UniRef90_A0A345MKD0	342.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-0178480_29	1160721.RBI_II00538	320.0	0	N/A	N/A
structural_annotation	UHGV-0178480_29	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_30	phrog_541	82.9	3.5e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-0178480_30	642492.Clole_0822	73.9	0.00000000000000294	N/A	N/A
PHROG	UHGV-0178480_31	phrog_793	49.6	0.000000000000069	head-tail adaptor	connector
UniRef90	UHGV-0178480_31	UniRef90_A0A1C6GM46	184.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0178480_31	1238184.CM001792_gene97	53.1	0.000000168	Minor capsid protein	N/A
Pfam	UHGV-0178480_31	PF10665	N/A	N/A	Minor capsid protein	Minor_capsid_1
COG	UHGV-0178480_31	COG5652	N/A	N/A	VanZ-like family protein (function unknown)	N/A
structural_annotation	UHGV-0178480_31	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_32	phrog_556	73.3	3e-21	minor head protein	head and packaging
UniRef90	UHGV-0178480_32	UniRef90_A0A1C6GMA0	104.0	2.24e-26	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0178480_32	1497679.EP56_07750	72.4	0.00000000000000738	Minor capsid protein	N/A
Pfam	UHGV-0178480_32	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0178480_32	PF11114	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0178480_33	PF08873	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_34	phrog_820	49.7	0.000000000000038	major tail protein	tail
UniRef90	UHGV-0178480_34	UniRef90_A0A174M1L1	115.0	1.98e-27	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0178480_34	663278.Ethha_0099	89.0	3.71e-19	N/A	N/A
structural_annotation	UHGV-0178480_34	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0178480_35	536233.CLO_0892	52.4	0.000000596	N/A	N/A
structural_annotation	UHGV-0178480_35	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_36	phrog_706	111.2	9.3e-33	N/A	unknown function
UniRef90	UHGV-0178480_36	UniRef90_A0A1C6GMP1	186.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0178480_36	1321782.HMPREF1986_02275	54.7	0.00000173	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0178480_36	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0178480_36	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0178480_37	phrog_6900	116.3	4.4e-34	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0178480_37	1158606.I579_01931	98.6	3.88e-19	phage tail tape measure protein	N/A
COG	UHGV-0178480_37	COG5283	N/A	N/A	Phage-related tail protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0178480	Yes	23,001	48	67	1