vOTU vOTU-093102

vOTU: vOTU-093102

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-093102
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00213 → vGENUS-00391 → vOTU-093102
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0102474
Biosample ID	SAMEA3708584
Genome length (bp)	26,992 bps
CheckV completeness	63.26% (Medium-quality)
CDS count	41
CDS density	93.32%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	30	Host agreement	90
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435555	Total connections	11	Host agreement	90.91

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0102474_3	phrog_4105	97.3	1.1e-28	N/A	unknown function
UniRef90	UHGV-0102474_3	UniRef90_A0A8D9UHA9	177.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0102474_3	411460.RUMTOR_01326	136.0	2.24e-40	N/A	N/A
PHROG	UHGV-0102474_4	phrog_1129	79.9	2e-23	holin	lysis
UniRef90	UHGV-0102474_4	UniRef90_A0A8D9PDD4	184.0	0	Holin	N/A
eggNOG-mapper	UHGV-0102474_4	1226322.HMPREF1545_00069	113.0	1.51e-31	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0102474_4	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0102474_4	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0102474_5	phrog_435	57.8	2.4e-16	endolysin	lysis
UniRef90	UHGV-0102474_5	UniRef90_A0A8D9PDX2	357.0	0	MurNAc-LAA protein	N/A
eggNOG-mapper	UHGV-0102474_5	1226322.HMPREF1545_01953	81.6	0.00000000000000115	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-0102474_5	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0102474_5	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0102474_6	phrog_12105	88.3	1.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0102474_6	1519439.JPJG01000060_gene1891	59.7	0.000000000802	N/A	N/A
PHROG	UHGV-0102474_7	phrog_511	219.8	0	internal virion protein	head and packaging
UniRef90	UHGV-0102474_7	UniRef90_A0A8D9UH72	953.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-0102474_7	1226322.HMPREF1545_00785	311.0	0	N/A	N/A
structural_annotation	UHGV-0102474_7	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102474_8	UniRef90_A0A8D9UGT1	135.0	1.01e-38	Sigma C capsid protein	N/A
eggNOG-mapper	UHGV-0102474_9	1410650.JHWL01000003_gene2815	65.5	0.00000000451	N/A	N/A
PHROG	UHGV-0102474_10	phrog_22978	837.8	0	N/A	unknown function
UniRef90	UHGV-0102474_10	UniRef90_UPI001C019A6F	422.0	0	OmpH family outer membrane protein	N/A
eggNOG-mapper	UHGV-0102474_10	1410650.JHWL01000003_gene2814	286.0	0	N/A	N/A
Pfam	UHGV-0102474_10	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
PHROG	UHGV-0102474_11	phrog_3754	94.2	1.4e-27	N/A	unknown function
eggNOG-mapper	UHGV-0102474_11	476272.RUMHYD_01764	162.0	0	N/A	N/A
PHROG	UHGV-0102474_12	phrog_21718	105.0	7.2e-31	N/A	unknown function
eggNOG-mapper	UHGV-0102474_12	397290.C810_05210	72.4	0.0000000000000597	N/A	N/A
PHROG	UHGV-0102474_13	phrog_22984	76.2	3.9e-22	N/A	unknown function
PHROG	UHGV-0102474_14	phrog_16490	114.5	4.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-0102474_14	1408437.JNJN01000043_gene803	174.0	0	N/A	N/A
PHROG	UHGV-0102474_15	phrog_20016	186.7	0	N/A	unknown function
UniRef90	UHGV-0102474_15	UniRef90_A0A285PT46	190.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0102474_15	1226322.HMPREF1545_00077	166.0	0	N/A	N/A
structural_annotation	UHGV-0102474_15	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0102474_16	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0102474_17	K14059	149.9	2.94273e-44	int; integrase	N/A
PHROG	UHGV-0102474_17	phrog_1	166.0	0	integrase	integration and excision
UniRef90	UHGV-0102474_17	UniRef90_A0A8D9UGU2	731.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0102474_17	693746.OBV_41260	281.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0102474_17	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0102474_17	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0102474_17	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102474_18	UniRef90_A0A8D9UHA6	383.0	0	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0102474_18	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0102474_18	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0102474_18	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0102474_20	K07727	43.3	0.0000000000091	K07727; putative transcriptional regulator	N/A
eggNOG-mapper	UHGV-0102474_20	658659.HMPREF0983_03304	60.8	0.000000000752	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0102474_20	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0102474_20	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0102474_21	UniRef90_UPI001C38B35F	52.4	0.0000002	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0102474_21	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0102474_21	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0102474_22	K07741	219.0	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0102474_22	phrog_63	180.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0102474_22	UniRef90_UPI001379CF69	324.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0102474_22	1232443.BAIA02000079_gene53	310.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0102474_22	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0102474_22	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0102474_22	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0102474_22	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102474_24	UniRef90_A0A8D9PDM8	134.0	6.54e-40	Pyocin activator protein	N/A
PHROG	UHGV-0102474_26	phrog_22529	50.9	0.00000000000002	N/A	unknown function
UniRef90	UHGV-0102474_26	UniRef90_A0A8D9UHA1	300.0	0	3D containing protein	N/A
eggNOG-mapper	UHGV-0102474_26	658088.HMPREF0987_02675	65.9	0.000000000205	peptidase	N/A
Pfam	UHGV-0102474_26	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0102474_26	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0102474_26	COG3584	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102474_28	UniRef90_A0A8D9UH91	311.0	0	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0102474_28	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
structural_annotation	UHGV-0102474_28	PF01381,PF21715,NF041951,TIGR04176,COG1476,COG1654	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102474_30	UniRef90_A0A845QLQ8	186.0	0	N/A	N/A
eggNOG-mapper	UHGV-0102474_30	33035.JPJF01000135_gene5082	122.0	8.36e-32	N/A	N/A
Pfam	UHGV-0102474_30	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0102474_30	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-0102474_31	UniRef90_B0PAM4	154.0	2.66247e-44	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0102474_31	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0102474_32	phrog_72	55.5	4.5e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102474_32	UniRef90_A0A8D9PDS2	358.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0102474_32	445972.ANACOL_01825	129.0	1.62e-35	N/A	N/A
structural_annotation	UHGV-0102474_32	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0102474_34	phrog_7566	102.0	3.1e-30	N/A	unknown function
UniRef90	UHGV-0102474_34	UniRef90_A0A8D9UHC0	146.0	6.44597e-44	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0102474_34	693746.OBV_24070	116.0	1.55e-32	N/A	N/A
KOfam	UHGV-0102474_35	K03111	145.2	7.10458e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0102474_35	phrog_44	140.5	1.10002e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102474_35	UniRef90_G4L1H2	192.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0102474_35	693746.OBV_19910	192.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0102474_35	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0102474_35	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0102474_35	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0102474_35	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0102474_35	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0102474_37	phrog_15768	95.3	1e-28	N/A	unknown function
UniRef90	UHGV-0102474_37	UniRef90_UPI001959E913	114.0	2.71e-28	N/A	N/A
eggNOG-mapper	UHGV-0102474_37	445970.ALIPUT_02689	78.2	0.00000000000000987	DNA-binding transcription factor activity	N/A
AcrCatalog	UHGV-0102474_37	cluster_38323	77.8	2.53e-19	NA	N/A
Pfam	UHGV-0102474_37	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0102474_37	COG2188	N/A	N/A	DNA-binding transcriptional regulator, GntR family	N/A
structural_annotation	UHGV-0102474_37	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0102474_38	phrog_9804	70.5	2.7e-20	N/A	unknown function
UniRef90	UHGV-0102474_38	UniRef90_A0A8D9PDS1	261.0	0	Replisome organizer	N/A
eggNOG-mapper	UHGV-0102474_38	903814.ELI_3550	85.1	8.32e-19	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0102474_38	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0102474_38	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0102474_40	phrog_190	111.5	7e-33	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0102474_40	UniRef90_A0A8D9PDD6	275.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0102474_40	1226322.HMPREF1545_00295	119.0	2.42e-32	N/A	N/A
Pfam	UHGV-0102474_40	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0102474_40	PF06356	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0102474	Yes	26,992	56	63	1
UHGV-2080607	No	26,256	56	62	1