vOTU vOTU-093593

vOTU: vOTU-093593

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-093593
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00210 → vSUBFAM-02898 → vOTU-093593
Host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660
Host range breadth	Family
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1348308
Biosample ID	N/A
Genome length (bp)	39,768 bps
CheckV completeness	70.17% (Medium-quality)
CDS count	70
CDS density	92.43%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660	Total connections	30	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-1348308_4	PF19891,TIGR04563,COG4877	N/A	N/A	N/A	N/A
PHROG	UHGV-1348308_5	phrog_22899	65.6	2e-19	N/A	unknown function
Pfam	UHGV-1348308_5	PF03382	N/A	N/A	N/A	DUF285
NCBIFam	UHGV-1348308_5	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
structural_annotation	UHGV-1348308_5	PF03382	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1348308_6	910314.HMPREF9220_1078	51.2	0.00000101	N/A	N/A
structural_annotation	UHGV-1348308_6	PF08481,NF032891,COG5456	N/A	N/A	N/A	N/A
UniRef90	UHGV-1348308_12	UniRef90_UPI001C0ED230	155.0	3.08286e-44	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1348308_12	1410632.JHWW01000006_gene695	158.0	0	N/A	N/A
structural_annotation	UHGV-1348308_12	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1348308_13	phrog_1233	48.9	0.00000000000012	N/A	unknown function
UniRef90	UHGV-1348308_13	UniRef90_R7IWF8	85.9	2.7e-19	Peptidase_M78 domain-containing protein	N/A
PHROG	UHGV-1348308_14	phrog_98	74.9	9.6e-22	N/A	unknown function
UniRef90	UHGV-1348308_14	UniRef90_J4VT31	82.4	1.25e-17	TIGR01671 family protein	N/A
eggNOG-mapper	UHGV-1348308_14	1123230.ARQJ01000027_gene1319	54.3	0.000000146	YopX protein	N/A
Pfam	UHGV-1348308_14	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1348308_14	PF09643,TIGR01671	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1348308_17	PF01104,NF041014	N/A	N/A	N/A	N/A
PHROG	UHGV-1348308_18	phrog_547	61.1	1.1e-17	phosphoesterase	other
UniRef90	UHGV-1348308_18	UniRef90_A0A6J5LFG3	54.3	0.00000355	COG4186 Predicted phosphoesterase or phosphohydrolase	N/A
Pfam	UHGV-1348308_18	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1348308_18	COG4186	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1348308_18	PF12850,MF_00575,NF006988,COG4186	N/A	N/A	N/A	N/A
KOfam	UHGV-1348308_30	K00571	155.3	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-1348308_30	phrog_67	119.0	6.7e-37	DNA methyltransferase	other
UniRef90	UHGV-1348308_30	UniRef90_A0A2G2LH73	230.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-1348308_30	246199.CUS_4482	204.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-1348308_30	MTase_II_00157	126.9	2e-38	Type II methyltransferase	RM
Pfam	UHGV-1348308_30	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-1348308_30	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-1348308_30	PF01555,NF008572,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-1348308_31	K00558	104.3	2e-36	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1348308_31	phrog_116	95.6	3.00018e-42	DNA methyltransferase	other
UniRef90	UHGV-1348308_31	UniRef90_A0A371JBS1	305.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1348308_31	397290.C810_05213	182.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1348308_31	MTase_II_00174	170.3	0	Type II methyltransferase	RM
Pfam	UHGV-1348308_31	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1348308_31	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1348308_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-1348308_33	phrog_256	321.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1348308_33	UniRef90_A0A1V5XFC1	313.0	0	Virulence-associated protein E	N/A
eggNOG-mapper	UHGV-1348308_33	1567012.A0A0A7RTG3_9VIRU	227.0	0	Virulence-associated protein E	N/A
Pfam	UHGV-1348308_33	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
structural_annotation	UHGV-1348308_33	PF05272,MF_00016,NF005477,COG5545	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1348308_34	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1348308_35	phrog_606	52.5	0.0000000000000066	terminase small subunit	head and packaging
UniRef90	UHGV-1348308_35	UniRef90_A0A318EMC2	58.5	0.000000224	DNA-packaging protein gp3	N/A
eggNOG-mapper	UHGV-1348308_35	931276.Cspa_c57180	66.2	0.0000000000197	DNA-packaging protein gp3	N/A
Pfam	UHGV-1348308_35	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-1348308_39	phrog_4534	88.7	7e-26	N/A	unknown function
PHROG	UHGV-1348308_44	phrog_38	151.1	7.00649e-45	terminase large subunit	head and packaging
UniRef90	UHGV-1348308_44	UniRef90_A0A843GZU6	281.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1348308_44	1298920.KI911353_gene2682	243.0	0	TIGRFAM Phage	N/A
COG	UHGV-1348308_44	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1348308_44	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1348308_46	phrog_64	155.2	0	portal protein	head and packaging
UniRef90	UHGV-1348308_46	UniRef90_A0A843H8C6	133.0	3.32e-30	Phage portal protein	N/A
eggNOG-mapper	UHGV-1348308_46	1229517.AMFD01000023_gene1319	97.8	6.69e-19	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1348308_46	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1348308_46	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1348308_47	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1348308_48	phrog_909	70.2	2.6e-20	major head protein	head and packaging
UniRef90	UHGV-1348308_48	UniRef90_A0A0K9GRK0	67.0	0.0000000000103	N/A	N/A
eggNOG-mapper	UHGV-1348308_48	1158612.I580_01911	78.6	6.63e-17	N/A	N/A
PHROG	UHGV-1348308_49	phrog_29	243.1	0	major head protein	head and packaging
UniRef90	UHGV-1348308_49	UniRef90_UPI00082C04A5	327.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-1348308_49	1158612.I580_01912	269.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-1348308_49	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-1348308_49	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1348308_52	UniRef90_A0A7C7ERG0	62.0	0.000000000497	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1348308_52	1298920.KI911353_gene2658	56.6	0.00000000751	N/A	N/A
structural_annotation	UHGV-1348308_53	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1348308_54	397290.C810_01411	53.1	0.00000287	N/A	N/A
structural_annotation	UHGV-1348308_54	PF17395,TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1348308_55	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1348308_56	phrog_158	46.8	0.00000000000056	major tail protein	tail
eggNOG-mapper	UHGV-1348308_56	1121333.JMLH01000047_gene1013	184.0	0	N/A	N/A
structural_annotation	UHGV-1348308_56	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1348308_57	UniRef90_A0A374HKD4	70.9	0.000000000000157	N/A	N/A
eggNOG-mapper	UHGV-1348308_57	469596.HMPREF9488_01311	67.8	0.000000000000389	N/A	N/A
Pfam	UHGV-1348308_57	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-1348308_57	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1348308_58	1121333.JMLH01000047_gene1011	67.4	0.00000000000262	N/A	N/A
PHROG	UHGV-1348308_59	phrog_1535	138.4	1.40004e-41	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1348308_59	428125.CLOLEP_01422	191.0	0	phage tail tape measure protein	N/A
COG	UHGV-1348308_59	COG5412	N/A	N/A	Phage-related protein	N/A
Pfam	UHGV-1348308_60	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1348308_60	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1348308_61	phrog_6616	72.2	4.9e-21	tail protein	tail
eggNOG-mapper	UHGV-1348308_61	658659.HMPREF0983_03295	107.0	1.99e-21	N/A	N/A
structural_annotation	UHGV-1348308_61	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1348308_62	phrog_372	121.1	1.4013e-45	tail protein	tail
UniRef90	UHGV-1348308_62	UniRef90_R7FHU8	147.0	3.61e-34	Tail protein	N/A
eggNOG-mapper	UHGV-1348308_62	1035189.HMPREF9954_0321	76.3	0.0000000000137	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-1348308_62	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1348308_62	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1348308_62	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1348308_64	phrog_11037	49.9	0.000000000000049	N/A	unknown function
UniRef90	UHGV-1348308_64	UniRef90_R5LJS8	470.0	0	SH3 domain protein	N/A
eggNOG-mapper	UHGV-1348308_64	1232449.BAHV02000016_gene1807	129.0	4.94e-33	N/A	N/A
structural_annotation	UHGV-1348308_64	PF01551,PF08460,NF040883,COG0739,COG3103	N/A	N/A	N/A	N/A
Pfam	UHGV-1348308_66	PF04647	N/A	N/A	Accessory gene regulator B	AgrB
PHROG	UHGV-1348308_68	phrog_3377	194.4	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1348308_68	1460635.JCM19038_3433	153.0	9.80909e-45	N/A	N/A
PHROG	UHGV-1348308_69	phrog_3754	75.8	7.8e-23	N/A	unknown function
eggNOG-mapper	UHGV-1348308_69	1226322.HMPREF1545_00073	66.2	0.00000000000221	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1348308	Yes	39,768	30	70	1
UHGV-0759796	No	38,377	30	68	1