vOTU vOTU-094588

vOTU: vOTU-094588

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-094588
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00096 → vGENUS-00953 → vOTU-094588
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lutetiensis
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0143647
Biosample ID	SAMN05827244
Genome length (bp)	26,752 bps
CheckV completeness	61.11% (Medium-quality)
CDS count	27
CDS density	93.64%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lutetiensis	Total connections	77	Host agreement	72.73
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	Total connections	67	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 61.11)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0143647_1	phrog_33593	403.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0143647_1	1123318.KB904586_gene513	431.0	0	N/A	N/A
UniRef90	UHGV-0143647_2	UniRef90_A0A4D6A4B1	149.0	4.2039e-45	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0143647_2	907931.AEIZ01000015_gene1102	52.8	0.000000178	Terminase small subunit	N/A
COG	UHGV-0143647_2	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-0143647_3	K06909	86.4	4e-25	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0143647_3	phrog_2	74.6	2.1e-21	terminase large subunit	head and packaging
UniRef90	UHGV-0143647_3	UniRef90_A0A1I7JLS5	924.0	0	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0143647_3	1123315.AUIP01000003_gene234	654.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0143647_3	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0143647_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0143647_3	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_4	phrog_64	437.7	0	portal protein	head and packaging
UniRef90	UHGV-0143647_4	UniRef90_A0A1I7JLS6	925.0	0	Phage portal protein, SPP1 family	N/A
eggNOG-mapper	UHGV-0143647_4	1123302.KB904182_gene75	715.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0143647_4	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0143647_4	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0143647_4	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_5	phrog_2841	330.9	0	minor head protein	head and packaging
UniRef90	UHGV-0143647_5	UniRef90_A0A4D6A5U5	882.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0143647_5	1123302.KB904182_gene74	433.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0143647_5	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0143647_5	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0143647_5	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0143647_5	PF04233,PF18812,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_6	phrog_172	128.5	4.9e-38	head scaffolding protein	head and packaging
UniRef90	UHGV-0143647_6	UniRef90_A0A3L9DSR8	203.0	0	N/A	N/A
eggNOG-mapper	UHGV-0143647_6	1123315.AUIP01000003_gene242	110.0	1.68e-27	N/A	N/A
Pfam	UHGV-0143647_6	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0143647_6	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_7	phrog_909	100.3	1.3e-29	major head protein	head and packaging
UniRef90	UHGV-0143647_7	UniRef90_A0A4D6ANB6	180.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0143647_7	1123302.KB904182_gene70	160.0	0	N/A	N/A
structural_annotation	UHGV-0143647_7	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_8	phrog_29	239.2	0	major head protein	head and packaging
UniRef90	UHGV-0143647_8	UniRef90_A0A4D6A5D1	660.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0143647_8	1123315.AUIP01000003_gene244	458.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0143647_8	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0143647_8	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_9	phrog_5279	72.5	3.9e-21	N/A	unknown function
UniRef90	UHGV-0143647_9	UniRef90_A0A447UCR4	93.6	2.24e-24	N/A	N/A
KOfam	UHGV-0143647_11	K07482	339.5	0	K07482; transposase, IS30 family	N/A
PHROG	UHGV-0143647_11	phrog_4646	266.2	0	transposase	integration and excision
UniRef90	UHGV-0143647_11	UniRef90_G5JTQ8	612.0	0	Integrase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-0143647_11	1069533.Sinf_0074	628.0	0	EVIDENCE BY HOMOLOGY BIO14.04 Transposon related functions. BELONGS TO THE IS30 FAMILY OF TRANSPOSASE. There are 15 such elements in the chromosome	N/A
Pfam	UHGV-0143647_11	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
NCBIFam	UHGV-0143647_11	NF033563.0	N/A	N/A	IS30 family transposase	N/A
COG	UHGV-0143647_11	COG2826	N/A	N/A	Transposase and inactivated derivatives, IS30 family	N/A
structural_annotation	UHGV-0143647_11	PF13936,PF02914,MF_01310,NF033563,COG2826	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_12	phrog_348	67.1	2.8e-19	minor head protein	head and packaging
eggNOG-mapper	UHGV-0143647_12	1123302.KB904182_gene67	138.0	1.65003e-41	N/A	N/A
structural_annotation	UHGV-0143647_12	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_13	phrog_5	83.7	3e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-0143647_13	UniRef90_A0A3S4I184	211.0	0	N/A	N/A
eggNOG-mapper	UHGV-0143647_13	1123302.KB904182_gene66	168.0	0	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0143647_13	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0143647_13	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0143647_13	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_14	phrog_176	58.6	3e-17	tail terminator	connector
UniRef90	UHGV-0143647_14	UniRef90_J7MAY0	147.0	1.02295e-43	N/A	N/A
eggNOG-mapper	UHGV-0143647_14	1123302.KB904182_gene65	187.0	0	N/A	N/A
structural_annotation	UHGV-0143647_14	PF06141,MF_00281,COG0016	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_15	phrog_238	175.8	0	major tail protein	tail
UniRef90	UHGV-0143647_15	UniRef90_A0A2I1YI77	374.0	0	Phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-0143647_15	1123302.KB904182_gene64	311.0	0	domain, Protein	N/A
NCBIFam	UHGV-0143647_15	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
COG	UHGV-0143647_15	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0143647_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_16	phrog_183	100.9	1.2e-29	tail chaperone protein	tail
UniRef90	UHGV-0143647_16	UniRef90_A0A3R9KJE8	143.0	8.21007e-41	N/A	N/A
eggNOG-mapper	UHGV-0143647_16	1123302.KB904182_gene63	170.0	0	Phage tail assembly chaperone protein, TAC	N/A
Pfam	UHGV-0143647_16	PF12363	N/A	N/A	Phage tail assembly chaperone protein, TAC	Phage_TAC_12
structural_annotation	UHGV-0143647_16	PF12363	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_17	phrog_2567	47.0	0.00000000000052	N/A	unknown function
UniRef90	UHGV-0143647_17	UniRef90_A0A447UCR7	108.0	6.88e-30	N/A	N/A
PHROG	UHGV-0143647_18	phrog_1204	750.4	0	tail protein	tail
UniRef90	UHGV-0143647_18	UniRef90_A0A3S4M2Z9	1202.0	0	N/A	N/A
eggNOG-mapper	UHGV-0143647_18	1158614.I592_02260	433.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0143647_18	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0143647_18	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0143647_18	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0143647_18	PF10145,TIGR01760	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_19	phrog_33	112.2	7.4e-33	distal tail protein Dit	tail
UniRef90	UHGV-0143647_19	UniRef90_A0A447UCS7	554.0	0	N/A	N/A
eggNOG-mapper	UHGV-0143647_19	1123302.KB904182_gene61	380.0	0	Phage tail protein	N/A
Pfam	UHGV-0143647_19	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
structural_annotation	UHGV-0143647_19	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0143647_20	K12478	61.2	1.2e-20	EEA1; early endosome antigen 1	N/A
PHROG	UHGV-0143647_20	phrog_3095	536.7	0	tail protein with endopeptidase activity	other
UniRef90	UHGV-0143647_20	UniRef90_UPI001BD9580E	2322.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0143647_20	1123302.KB904182_gene60	661.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-0143647_20	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0143647_20	COG1511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0143647_21	UniRef90_A0A3S5DNE7	97.1	1.89e-25	N/A	N/A
PHROG	UHGV-0143647_22	phrog_1554	105.3	5.5e-31	N/A	unknown function
UniRef90	UHGV-0143647_22	UniRef90_UPI001BD92659	234.0	0	N/A	N/A
Pfam	UHGV-0143647_22	PF07104	N/A	N/A	N/A	DUF1366
structural_annotation	UHGV-0143647_22	PF07104	N/A	N/A	N/A	N/A
PHROG	UHGV-0143647_23	phrog_1382	67.6	6.4e-20	N/A	unknown function
UniRef90	UHGV-0143647_23	UniRef90_B0YL74	82.0	2.23e-19	Orf24	N/A
PHROG	UHGV-0143647_24	phrog_1863	108.2	2.5e-32	N/A	unknown function
UniRef90	UHGV-0143647_24	UniRef90_B0YL75	132.0	6.99e-39	Orf25	N/A
eggNOG-mapper	UHGV-0143647_24	1403946.Q615_SPAC00127G0125	63.2	0.00000000000259	N/A	N/A
PHROG	UHGV-0143647_25	phrog_443	58.8	1.7e-16	holin	lysis
UniRef90	UHGV-0143647_25	UniRef90_A0A1H0YMM3	117.0	3.67e-33	Phage r1t holin	N/A
eggNOG-mapper	UHGV-0143647_25	1123312.KB904569_gene363	84.3	5.19e-21	N/A	N/A
Pfam	UHGV-0143647_25	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0143647_25	PF16945	N/A	N/A	N/A	N/A
KOfam	UHGV-0143647_26	K22409	144.8	9.09443e-43	sle1; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0143647_26	phrog_291	277.2	0	endolysin	lysis
UniRef90	UHGV-0143647_26	UniRef90_UPI001BDAD522	784.0	0	LysM peptidoglycan-binding domain-containing protein	N/A
eggNOG-mapper	UHGV-0143647_26	1403946.Q615_SPAC00127G0123	582.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0143647_26	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0143647_26	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-0143647_26	COG1388	N/A	N/A	LysM repeat	N/A
structural_annotation	UHGV-0143647_26	PF01476,PF18697,TIGR02899,COG3757,COG1388	N/A	N/A	N/A	N/A
UniRef90	UHGV-0143647_27	UniRef90_UPI0011DD3EE1	338.0	0	N/A	N/A
eggNOG-mapper	UHGV-0143647_27	1201292.DR75_1491	135.0	9.77e-37	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0143647	Yes	26,752	39	61	1
UHGV-1446224	No	26,752	39	61	1