vOTU vOTU-094626

vOTU: vOTU-094626

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-094626
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vOTU-094626
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0207562
Biosample ID	SAMN10080880
Genome length (bp)	36,643 bps
CheckV completeness	86.79% (Medium-quality)
CDS count	58
CDS density	89.58%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	452	Host agreement	98.01
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 86.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0207562_2	phrog_3558	207.2	0	tail protein	tail
UniRef90	UHGV-0207562_2	UniRef90_UPI001C01D15B	157.0	2.21e-37	phage tail protein	N/A
eggNOG-mapper	UHGV-0207562_2	1235799.C818_04233	90.9	1.36e-16	Prophage endopeptidase tail	N/A
Pfam	UHGV-0207562_2	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0207562_2	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0207562_2	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_3	phrog_33	43.9	0.0000000000044	distal tail protein Dit	tail
UniRef90	UHGV-0207562_3	UniRef90_A0A417QGC1	136.0	6.09e-36	MtfA protein	N/A
eggNOG-mapper	UHGV-0207562_3	1235792.C808_00094	114.0	4e-28	phage tail	N/A
COG	UHGV-0207562_3	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0207562_3	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_4	phrog_9959	104.0	8.9e-31	tail length tape measure protein	tail
UniRef90	UHGV-0207562_4	UniRef90_A0A6N7TLD3	1200.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0207562_4	1492737.FEM08_12070	144.0	4.39e-33	tape measure	N/A
Pfam	UHGV-0207562_4	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0207562_4	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0207562_4	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0207562_4	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_7	phrog_885	61.1	1.5e-17	major tail protein	tail
eggNOG-mapper	UHGV-0207562_7	1111121.HMPREF1247_0789	114.0	3.58e-29	N/A	N/A
structural_annotation	UHGV-0207562_7	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207562_8	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_9	phrog_17977	44.1	0.0000000000028	N/A	unknown function
UniRef90	UHGV-0207562_9	UniRef90_A0A844DHJ8	119.0	1.63e-32	Phage head closure protein	N/A
structural_annotation	UHGV-0207562_9	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_11	phrog_544	149.6	2.10195e-44	major head protein	head and packaging
UniRef90	UHGV-0207562_11	UniRef90_R0BKA1	435.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0207562_11	476272.RUMHYD_01776	325.0	0	N/A	N/A
structural_annotation	UHGV-0207562_11	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_14	phrog_5	44.0	0.0000000000052	tail completion or Neck1 protein	connector
UniRef90	UHGV-0207562_14	UniRef90_A0A6N7TNP6	286.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0207562_14	1123309.AQYB01000018_gene814	90.9	2.25e-21	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-0207562_14	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
KOfam	UHGV-0207562_15	K07741	93.3	6.2e-27	antB; anti-repressor protein	N/A
PHROG	UHGV-0207562_15	phrog_373	151.4	5.60519e-45	anti-repressor	transcription regulation
UniRef90	UHGV-0207562_15	UniRef90_UPI0012DFCA1F	195.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0207562_15	1567013.A0A0A7RVQ9_9CAUD	143.0	2.39e-39	AntA/AntB antirepressor	N/A
Pfam	UHGV-0207562_15	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0207562_15	PF10552	N/A	N/A	ORF6C domain	ORF6C
structural_annotation	UHGV-0207562_15	PF10552,PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207562_17	PF07342	N/A	N/A	N/A	N/A
KOfam	UHGV-0207562_18	K07727	53.4	0.0000000000000067	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0207562_18	UniRef90_A0A1Q6RPT0	118.0	1.42e-32	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0207562_18	1378168.N510_01451	91.7	2.4e-23	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0207562_18	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0207562_18	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_19	phrog_2468	82.8	5.7e-24	head morphogenesis	head and packaging
UniRef90	UHGV-0207562_19	UniRef90_A0A6N7TLR7	608.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0207562_19	1504822.CCNO01000013_gene286	111.0	4.46e-24	cell adhesion	N/A
Pfam	UHGV-0207562_19	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0207562_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207562_19	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
Pfam	UHGV-0207562_20	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0207562_21	phrog_64	119.2	1.6e-35	portal protein	head and packaging
UniRef90	UHGV-0207562_21	UniRef90_A0A6N7TNT3	875.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0207562_21	1042156.CXIVA_01850	82.8	0.0000000000000451	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0207562_21	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0207562_21	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-0207562_22	K06909	141.9	6.00036e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0207562_22	phrog_10250	173.5	0	N/A	unknown function
UniRef90	UHGV-0207562_22	UniRef90_A0A844D8I4	840.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0207562_22	411490.ANACAC_00783	486.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0207562_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0207562_22	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0207562_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0207562_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0207562_22	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207562_23	UniRef90_UPI0018CC2891	114.0	1.18e-29	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0207562_23	1235790.C805_00037	110.0	7.35e-29	N/A	N/A
structural_annotation	UHGV-0207562_23	PF04218	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_24	phrog_36	66.2	6.2e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0207562_24	UniRef90_A0A6N7TNN9	274.0	0	N/A	N/A
eggNOG-mapper	UHGV-0207562_24	748224.HMPREF9436_01463	77.0	6.3e-16	N/A	N/A
Pfam	UHGV-0207562_24	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-0207562_24	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0207562_26	K01160	56.5	9.2e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0207562_26	phrog_34	56.0	9e-16	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207562_26	UniRef90_A0A6N7TND6	197.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0207562_26	875454.BAEW01000002_gene491	132.0	4.54e-38	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0207562_26	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0207562_26	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0207562_26	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_27	phrog_3136	109.7	8.3e-33	N/A	unknown function
UniRef90	UHGV-0207562_27	UniRef90_A0A6N7TMC2	197.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0207562_27	1235793.C809_02645	57.0	0.000000378	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0207562_27	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0207562_27	PF12961,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_29	phrog_757	125.8	2.6e-37	DNA methyltransferase	other
UniRef90	UHGV-0207562_29	UniRef90_A0A3E2U1Y9	316.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0207562_29	748224.HMPREF9436_03069	170.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0207562_29	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0207562_30	phrog_757	48.6	0.00000000000011	DNA methyltransferase	other
UniRef90	UHGV-0207562_30	UniRef90_A0A7J2R6L5	70.5	0.00000000000000529	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0207562_30	748224.HMPREF9436_03069	103.0	9.74e-27	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0207562_30	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0207562_32	PF11417	N/A	N/A	N/A	N/A
KOfam	UHGV-0207562_33	K02086	64.2	2.1e-18	dnaD; DNA replication protein	N/A
PHROG	UHGV-0207562_33	phrog_186	74.9	9.2e-22	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207562_33	UniRef90_A0A844D5V0	223.0	0	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0207562_33	748224.HMPREF9436_03357	65.9	0.000000000651	N/A	N/A
Pfam	UHGV-0207562_33	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0207562_33	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0207562_33	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
structural_annotation	UHGV-0207562_33	PF19808,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207562_34	UniRef90_UPI001CBB85F6	113.0	2.37e-28	single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0207562_34	PF00436,MF_00720,NF004512,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_35	phrog_2760	183.5	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0207562_35	UniRef90_A0A3A6EAW6	526.0	0	Phage recombination protein Bet	N/A
eggNOG-mapper	UHGV-0207562_35	1235794.C811_01355	151.0	2.42999e-41	RecT family	N/A
Pfam	UHGV-0207562_35	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0207562_35	TIGR01913.1	N/A	N/A	phage recombination protein Bet	N/A
COG	UHGV-0207562_35	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0207562_35	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_36	phrog_674	149.4	2.38221e-44	N/A	unknown function
UniRef90	UHGV-0207562_36	UniRef90_A0A3A6E846	483.0	0	N/A	N/A
eggNOG-mapper	UHGV-0207562_36	556268.OFAG_00840	83.6	9.6e-16	N/A	N/A
Pfam	UHGV-0207562_36	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0207562_36	PF07083	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207562_37	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207562_39	PF09537	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207562_40	PF12270,NF040944	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207562_41	UniRef90_UPI00130EBC54	144.0	2.88667e-43	N/A	N/A
eggNOG-mapper	UHGV-0207562_41	1229751.R9QLK3_9CAUD	48.1	0.00000288	N/A	N/A
structural_annotation	UHGV-0207562_41	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_42	phrog_4433	153.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0207562_42	394503.Ccel_3068	109.0	9.18e-27	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0207562_42	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0207562_42	PF12120,NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_43	phrog_15946	78.2	1.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0207562_43	1041147.AUFB01000014_gene330	57.0	0.000000107	N/A	N/A
PHROG	UHGV-0207562_44	phrog_4652	90.9	2.5e-27	N/A	unknown function
eggNOG-mapper	UHGV-0207562_44	397290.C810_01459	159.0	0	N/A	N/A
structural_annotation	UHGV-0207562_44	TIGR02582,COG1604	N/A	N/A	N/A	N/A
KOfam	UHGV-0207562_45	K07741	91.3	3e-26	antB; anti-repressor protein	N/A
PHROG	UHGV-0207562_45	phrog_63	181.9	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0207562_45	UniRef90_A0A2J4JRR8	436.0	0	Phage regulatory protein/antirepressor Ant	N/A
eggNOG-mapper	UHGV-0207562_45	1423816.BACQ01000027_gene970	241.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-0207562_45	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-0207562_45	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
NCBIFam	UHGV-0207562_45	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-0207562_45	COG3645	N/A	N/A	Phage antirepressor protein YoqD, KilAC domain	N/A
structural_annotation	UHGV-0207562_45	PF03374,PF09669,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
UniRef90	UHGV-0207562_46	UniRef90_A0A1C7FQD9	51.2	0.000000439	Transcriptional regulator	N/A
structural_annotation	UHGV-0207562_46	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_47	phrog_8	41.2	0.000000000034	transcriptional regulator	transcription regulation
UniRef90	UHGV-0207562_47	UniRef90_UPI001CBE4822	94.7	4.91e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0207562_47	1226322.HMPREF1545_00148	77.0	9.07e-17	Transcriptional	N/A
Pfam	UHGV-0207562_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0207562_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0207562_47	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0207562_49	1123037.AUDE01000011_gene922	96.7	1.76e-20	N/A	N/A
structural_annotation	UHGV-0207562_49	COG5342	N/A	N/A	N/A	N/A
KOfam	UHGV-0207562_52	K15773	40.6	0.000000000048	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
UniRef90	UHGV-0207562_52	UniRef90_A0A6N7TLT0	370.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0207562_52	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0207562_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0207562_52	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0207562_53	K14059	126.3	4.3e-37	int; integrase	N/A
PHROG	UHGV-0207562_53	phrog_1	106.1	4e-31	integrase	integration and excision
UniRef90	UHGV-0207562_53	UniRef90_A0A6N7TNW8	741.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0207562_53	748224.HMPREF9436_03382	736.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0207562_53	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0207562_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0207562_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0207562_53	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0207562_55	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_56	phrog_20016	206.6	0	N/A	unknown function
UniRef90	UHGV-0207562_56	UniRef90_A0A285PT46	213.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0207562_56	1226322.HMPREF1545_00077	182.0	0	N/A	N/A
structural_annotation	UHGV-0207562_56	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0207562_58	phrog_16490	165.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0207562_58	397290.C810_01328	126.0	7.28e-32	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0207562	Yes	36,643	55	87	1