vOTU vOTU-094678

vOTU: vOTU-094678

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-094678
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435975
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-01732 → vGENUS-16828 → vOTU-094678
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435975
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1463540
Biosample ID	SAMEA1906482
Genome length (bp)	23,905 bps
CheckV completeness	56.42% (Medium-quality)
CDS count	32
CDS density	90.66%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435975	Total connections	115	Host agreement	82.61
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435975	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 56.42)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1463540_1	K01448	47.5	0.00000000000023	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1463540_1	phrog_435	76.9	3.2e-22	endolysin	lysis
UniRef90	UHGV-1463540_1	UniRef90_R6GV68	454.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1463540_1	994573.T472_0210960	146.0	6.68994e-41	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-1463540_1	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-1463540_1	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-1463540_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1463540_1	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_2	phrog_199	81.4	9e-24	holin	lysis
UniRef90	UHGV-1463540_2	UniRef90_UPI001BEFC888	257.0	0	Phage holin family protein	N/A
eggNOG-mapper	UHGV-1463540_2	1160721.RBI_I01565	134.0	5.08e-38	Bacteriophage holin family	N/A
Pfam	UHGV-1463540_2	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1463540_2	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1463540_2	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1463540_2	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
UniRef90	UHGV-1463540_3	UniRef90_A0A174XWS3	77.4	2.07e-16	Bacterial regulatory proteins, luxR family	N/A
eggNOG-mapper	UHGV-1463540_3	689781.AUJX01000009_gene401	54.7	0.000000192	N/A	N/A
Pfam	UHGV-1463540_3	PF13936	N/A	N/A	Helix-turn-helix domain	HTH_38
structural_annotation	UHGV-1463540_3	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A
UniRef90	UHGV-1463540_5	UniRef90_A0A847E3M6	52.8	0.0000000336	Ribbon-helix-helix protein, CopG family	N/A
Pfam	UHGV-1463540_5	PF07878	N/A	N/A	CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5	RHH_5
COG	UHGV-1463540_5	COG4877	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463540_5	PF03869,NF010256,COG4877	N/A	N/A	N/A	N/A
KOfam	UHGV-1463540_6	K24213	43.0	0.0000000000049	C1QTNF9; complement C1q and tumor necrosis factor-related protein 9	N/A
PHROG	UHGV-1463540_6	phrog_10972	56.4	4.8e-16	tail fiber protein	tail
Pfam	UHGV-1463540_6	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-1463540_7	phrog_372	235.7	0	tail protein	tail
UniRef90	UHGV-1463540_7	UniRef90_UPI001373A0FD	243.0	0	N/A	N/A
eggNOG-mapper	UHGV-1463540_7	1235802.C823_05263	213.0	0	N/A	N/A
Pfam	UHGV-1463540_7	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-1463540_7	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-1463540_7	PF05895,MF_04116,NF010681,COG3401,COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_8	phrog_6616	110.2	2.1e-33	tail protein	tail
UniRef90	UHGV-1463540_8	UniRef90_R5GWP5	66.6	0.0000000571	KID repeat family protein	N/A
eggNOG-mapper	UHGV-1463540_8	469596.HMPREF9488_01318	290.0	0	N/A	N/A
structural_annotation	UHGV-1463540_8	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_9	phrog_1194	117.1	7.2e-35	N/A	unknown function
UniRef90	UHGV-1463540_9	UniRef90_A0A0B3VTI7	112.0	7.5e-30	N/A	N/A
eggNOG-mapper	UHGV-1463540_9	1121333.JMLH01000047_gene1008	122.0	3.4e-34	N/A	N/A
Pfam	UHGV-1463540_9	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1463540_9	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_10	phrog_1535	105.8	0	tail length tape measure protein	tail
UniRef90	UHGV-1463540_10	UniRef90_A0A810PX76	337.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1463540_10	1235797.C816_04182	454.0	0	SLT domain	N/A
COG	UHGV-1463540_10	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463540_10	PF16789,TIGR02473,COG2882	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_11	phrog_706	112.7	3e-33	N/A	unknown function
UniRef90	UHGV-1463540_11	UniRef90_UPI000682A80B	223.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1463540_11	693746.OBV_18170	216.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1463540_11	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1463540_11	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_12	phrog_11299	77.5	1.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-1463540_12	693746.OBV_18160	143.0	4.55983e-42	N/A	N/A
structural_annotation	UHGV-1463540_12	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_13	phrog_3099	78.1	1.2e-22	N/A	unknown function
eggNOG-mapper	UHGV-1463540_13	1235797.C816_04186	170.0	0	N/A	N/A
structural_annotation	UHGV-1463540_13	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_14	phrog_3266	67.8	1.4e-19	tail completion	connector
eggNOG-mapper	UHGV-1463540_14	693746.OBV_18140	161.0	0	N/A	N/A
structural_annotation	UHGV-1463540_14	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_15	phrog_556	53.8	0.0000000000000026	minor head protein	head and packaging
UniRef90	UHGV-1463540_15	UniRef90_UPI001967B4B3	87.0	3.1e-19	minor capsid protein	N/A
Pfam	UHGV-1463540_15	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1463540_15	PF11114	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463540_16	PF20536,MF_01370,TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_17	phrog_541	66.7	3.3e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-1463540_17	693746.OBV_18110	126.0	4.59e-36	N/A	N/A
PHROG	UHGV-1463540_18	phrog_212	254.2	0	major head protein	head and packaging
UniRef90	UHGV-1463540_18	UniRef90_A0A354MR33	536.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1463540_18	935836.JAEL01000021_gene1494	337.0	0	N/A	N/A
structural_annotation	UHGV-1463540_18	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_19	phrog_194	84.5	1.5e-24	head scaffolding protein	head and packaging
UniRef90	UHGV-1463540_19	UniRef90_UPI00164D9F94	217.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1463540_19	693746.OBV_18080	175.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-1463540_19	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1463540_19	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_21	phrog_581	219.5	0	minor head protein	head and packaging
UniRef90	UHGV-1463540_21	UniRef90_UPI001958D166	576.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1463540_21	693746.OBV_18050	542.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1463540_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1463540_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1463540_21	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_22	phrog_533	173.9	0	portal protein	head and packaging
UniRef90	UHGV-1463540_22	UniRef90_UPI000680A1DB	523.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1463540_22	411471.SUBVAR_06996	385.0	0	N/A	N/A
structural_annotation	UHGV-1463540_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1463540_24	K06909	411.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1463540_24	phrog_3717	158.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1463540_24	UniRef90_UPI00164D9352	676.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1463540_24	411471.SUBVAR_06507	577.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1463540_24	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1463540_24	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1463540_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1463540_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1463540_24	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1463540_25	phrog_2412	90.8	1.3e-26	N/A	unknown function
eggNOG-mapper	UHGV-1463540_25	742738.HMPREF9460_02504	140.0	1.71e-41	N/A	N/A
PHROG	UHGV-1463540_26	phrog_606	92.6	3.4e-27	terminase small subunit	head and packaging
UniRef90	UHGV-1463540_26	UniRef90_UPI00195648BB	172.0	0	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-1463540_26	445972.ANACOL_01838	150.0	1.82169e-44	DNA-packaging protein gp3	N/A
Pfam	UHGV-1463540_26	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
eggNOG-mapper	UHGV-1463540_27	693746.OBV_18010	126.0	5.22e-35	N/A	N/A
structural_annotation	UHGV-1463540_27	TIGR01636	N/A	N/A	N/A	N/A
Pfam	UHGV-1463540_31	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
structural_annotation	UHGV-1463540_31	PF14354,TIGR03655,COG4888	N/A	N/A	N/A	N/A
KOfam	UHGV-1463540_32	K00558	187.8	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1463540_32	phrog_116	229.6	0	DNA methyltransferase	other
UniRef90	UHGV-1463540_32	UniRef90_A0A350THX9	689.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1463540_32	1121334.KB911073_gene1852	566.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1463540_32	MTase_II_00164	81.9	7e-29	Type II methyltransferase	RM
Pfam	UHGV-1463540_32	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1463540_32	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1463540_32	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1463540	Yes	23,905	57	56	1
UHGV-1460426	No	22,731	56	54	1