vOTU vOTU-095593

vOTU: vOTU-095593

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-095593
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00492 → vOTU-095593
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Ruminococcus_B → Ruminococcus_B gnavus
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1853150
Biosample ID	SAMN18794233
Genome length (bp)	30,733 bps
CheckV completeness	74.08% (Medium-quality)
CDS count	46
CDS density	89.51%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Ruminococcus_B → Ruminococcus_B gnavus	Total connections	61	Host agreement	81.97
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Ruminococcus_B → Ruminococcus_B gnavus	Total connections	176	Host agreement	91.48

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 74.08)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1853150_1	K07451	44.3	0.0000000000035	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-1853150_1	phrog_119	78.0	1.3e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1853150_1	UniRef90_R5TPY3	241.0	0	Phage related protein	N/A
eggNOG-mapper	UHGV-1853150_1	1235792.C808_00081	173.0	0	HNH nucleases	N/A
Pfam	UHGV-1853150_1	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1853150_1	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-1853150_2	UniRef90_A0A2N5Q1T5	124.0	3.73e-36	Chemotaxis protein	N/A
eggNOG-mapper	UHGV-1853150_2	1042156.CXIVA_01520	72.4	3.49e-16	N/A	N/A
KOfam	UHGV-1853150_3	K18843	70.0	5.3e-20	hicB; antitoxin HicB	N/A
PHROG	UHGV-1853150_3	phrog_497	83.5	3.9e-24	toxin-antitoxin system HicB-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1853150_3	UniRef90_UPI0009302C41	229.0	0	type II toxin-antitoxin system HicB family antitoxin	N/A
eggNOG-mapper	UHGV-1853150_3	97139.C824_05055	187.0	0	Toxin-antitoxin system, antitoxin component, HicB family	N/A
Pfam	UHGV-1853150_3	PF15919	N/A	N/A	HicB_like antitoxin of bacterial toxin-antitoxin system	HicB_lk_antitox
COG	UHGV-1853150_3	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
structural_annotation	UHGV-1853150_3	PF15919,COG1598	N/A	N/A	N/A	N/A
KOfam	UHGV-1853150_4	K07339	41.0	0.000000000034	hicA; mRNA interferase HicA [EC:3.1.-.-]	N/A
PHROG	UHGV-1853150_4	phrog_353	83.2	1.9e-24	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1853150_4	UniRef90_UPI00164AF235	105.0	9.24e-29	type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-1853150_4	397287.C807_02050	104.0	3.13e-29	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-1853150_4	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
COG	UHGV-1853150_4	COG1724	N/A	N/A	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	N/A
structural_annotation	UHGV-1853150_4	PF07927,COG1724	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1853150_5	553973.CLOHYLEM_05570	69.7	0.00000000000000118	N/A	N/A
structural_annotation	UHGV-1853150_6	PF17224,COG3354	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_7	phrog_36	62.4	9.2e-18	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1853150_7	742765.HMPREF9457_02116	147.0	2.77457e-43	N/A	N/A
structural_annotation	UHGV-1853150_7	PF02996	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1853150_9	411470.RUMGNA_02203	244.0	0	N/A	N/A
PHROG	UHGV-1853150_12	phrog_26861	120.1	1.5e-35	N/A	unknown function
UniRef90	UHGV-1853150_12	UniRef90_A0A1C5X384	295.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1853150_12	1256908.HMPREF0373_01719	160.0	0	N/A	N/A
Pfam	UHGV-1853150_12	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1853150_12	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1853150_12	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1853150_12	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_13	phrog_24386	120.9	1.1e-35	N/A	unknown function
eggNOG-mapper	UHGV-1853150_13	1235799.C818_04203	120.0	2.05e-33	COG NOG28949 non supervised orthologous group	N/A
COG	UHGV-1853150_13	COG0241	N/A	N/A	Histidinol phosphatase/D-glycero-mannoheptose bisphosphatephosphatase, HAD superfamily	N/A
structural_annotation	UHGV-1853150_13	TIGR01689	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1853150_14	1232453.BAIF02000010_gene3336	73.6	0.000000000000121	N/A	N/A
PHROG	UHGV-1853150_15	phrog_7566	110.0	8.2e-33	N/A	unknown function
eggNOG-mapper	UHGV-1853150_15	665950.HMPREF1025_02547	174.0	0	N/A	N/A
PHROG	UHGV-1853150_16	phrog_15077	124.4	3.3e-37	N/A	unknown function
UniRef90	UHGV-1853150_16	UniRef90_A0A7M3SA13	125.0	2.73e-28	N/A	N/A
eggNOG-mapper	UHGV-1853150_16	742740.HMPREF9474_03494	103.0	2.65e-21	N/A	N/A
structural_annotation	UHGV-1853150_16	PF11300,NF033725	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_17	phrog_8470	272.1	0	N/A	unknown function
UniRef90	UHGV-1853150_17	UniRef90_UPI00042669A6	542.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1853150_17	1235793.C809_02197	241.0	0	PcfJ-like protein	N/A
Pfam	UHGV-1853150_17	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-1853150_17	PF14284	N/A	N/A	N/A	N/A
UniRef90	UHGV-1853150_18	UniRef90_UPI001C0EE701	104.0	6.91e-26	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-1853150_18	1235793.C809_01906	79.0	2.14e-16	N/A	N/A
Pfam	UHGV-1853150_18	PF14058	N/A	N/A	PcfK-like protein	PcfK
KOfam	UHGV-1853150_19	K03469	52.0	0.000000000000015	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1853150_19	phrog_531	64.8	1.7e-18	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1853150_19	UniRef90_A0A414UW29	302.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1853150_19	1235792.C808_03083	171.0	0	RNase H	N/A
Pfam	UHGV-1853150_19	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1853150_19	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1853150_19	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_20	phrog_3584	182.7	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1853150_20	1232453.BAIF02000027_gene4199	299.0	0	N/A	N/A
structural_annotation	UHGV-1853150_20	PF01446	N/A	N/A	N/A	N/A
Pfam	UHGV-1853150_24	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
structural_annotation	UHGV-1853150_24	PF10743,NF040990,COG3311	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1853150_25	NF037954	N/A	N/A	N/A	N/A
UniRef90	UHGV-1853150_27	UniRef90_A0A894KEH6	91.7	5.3e-23	Alcohol dehydrogenase	N/A
PHROG	UHGV-1853150_28	phrog_8	53.3	0.0000000000000075	transcriptional regulator	transcription regulation
UniRef90	UHGV-1853150_28	UniRef90_A0A2Z4UCW0	87.4	1.47e-21	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1853150_28	665950.HMPREF1025_02561	80.9	9.71e-20	sequence-specific DNA binding	N/A
Pfam	UHGV-1853150_28	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1853150_28	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1853150_28	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_31	phrog_8	53.9	0.0000000000000048	transcriptional regulator	transcription regulation
UniRef90	UHGV-1853150_31	UniRef90_A0A2N5Q2U3	118.0	9.7e-34	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1853150_31	411460.RUMTOR_02057	105.0	2.52e-29	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1853150_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1853150_31	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1853150_32	K22300	54.9	0.0000000000000022	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1853150_32	phrog_8	63.4	5.3e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-1853150_32	UniRef90_A0A2N5Q2U4	268.0	0	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-1853150_32	411460.RUMTOR_02056	191.0	0	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-1853150_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1853150_32	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-1853150_32	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_33	phrog_87	94.8	6.9e-28	metallo-protease	other
UniRef90	UHGV-1853150_33	UniRef90_A0A829NVG0	288.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-1853150_33	411460.RUMTOR_02055	194.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-1853150_33	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-1853150_33	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-1853150_33	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_34	phrog_1847	464.8	0	N/A	unknown function
UniRef90	UHGV-1853150_34	UniRef90_UPI001D046368	839.0	0	N/A	N/A
eggNOG-mapper	UHGV-1853150_34	608534.GCWU000341_02322	426.0	0	T5orf172	N/A
Pfam	UHGV-1853150_34	PF13250	N/A	N/A	N/A	DUF4041
Pfam	UHGV-1853150_34	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-1853150_34	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1853150_34	PF13250,NF041454	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_35	phrog_16228	210.3	0	N/A	unknown function
UniRef90	UHGV-1853150_35	UniRef90_A0A2N5NUN7	355.0	0	Uma2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1853150_35	500632.CLONEX_01584	319.0	0	Putative restriction endonuclease	N/A
Pfam	UHGV-1853150_35	PF05685	N/A	N/A	Putative restriction endonuclease	Uma2
COG	UHGV-1853150_35	COG4636	N/A	N/A	Endonuclease, Uma2 family (restriction endonuclease fold)	N/A
structural_annotation	UHGV-1853150_35	PF05685,COG4636	N/A	N/A	N/A	N/A
KOfam	UHGV-1853150_36	K14059	75.7	9.4e-22	int; integrase	N/A
PHROG	UHGV-1853150_36	phrog_1	105.8	5.6e-31	integrase	integration and excision
UniRef90	UHGV-1853150_36	UniRef90_A0A829NH64	768.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1853150_36	1232453.BAIF02000010_gene3323	404.0	0	Phage integrase family	N/A
Pfam	UHGV-1853150_36	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1853150_36	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1853150_36	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1853150_37	K07487	170.3	0	K07487; transposase	N/A
PHROG	UHGV-1853150_37	phrog_8928	153.6	1.4013e-45	N/A	unknown function
UniRef90	UHGV-1853150_37	UniRef90_A0A1Y4B2N6	897.0	0	IS5/IS1182 family transposase	N/A
eggNOG-mapper	UHGV-1853150_37	180332.JTGN01000003_gene2217	770.0	0	PFAM transposase, IS4 family protein	N/A
Pfam	UHGV-1853150_37	PF05598	N/A	N/A	N/A	DUF772
Pfam	UHGV-1853150_37	PF13751	N/A	N/A	Transposase DDE domain	DDE_Tnp_1_6
NCBIFam	UHGV-1853150_37	NF033551.1	N/A	N/A	IS1182 family transposase	N/A
COG	UHGV-1853150_37	COG3039	N/A	N/A	Transposase and inactivated derivatives, IS5 family	N/A
structural_annotation	UHGV-1853150_37	PF01609,PF05598,NF033551,COG5421	N/A	N/A	N/A	N/A
KOfam	UHGV-1853150_38	K07273	196.3	0	acm; lysozyme	N/A
PHROG	UHGV-1853150_38	phrog_291	153.1	2.8026e-45	endolysin	lysis
UniRef90	UHGV-1853150_38	UniRef90_A0A173YXL7	444.0	0	N-acetylmuramoyl-L-alanine amidase sle1	N/A
eggNOG-mapper	UHGV-1853150_38	33035.JPJF01000043_gene994	251.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1853150_38	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-1853150_38	PF08230	N/A	N/A	CW_7 repeat	CW_7
Pfam	UHGV-1853150_38	PF01476	N/A	N/A	LysM domain	LysM
COG	UHGV-1853150_38	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1853150_38	PF01183,PF01476,PF08230,TIGR02899,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_39	phrog_1129	87.8	6.8e-26	holin	lysis
UniRef90	UHGV-1853150_39	UniRef90_UPI00051B7422	155.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-1853150_39	1232453.BAIF02000013_gene3227	145.0	3.08286e-44	N/A	N/A
Pfam	UHGV-1853150_39	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1853150_39	PF16079	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_40	phrog_1863	81.5	5.5e-24	N/A	unknown function
eggNOG-mapper	UHGV-1853150_40	1232453.BAIF02000059_gene1610	101.0	1.61e-27	N/A	N/A
KOfam	UHGV-1853150_42	K10804	41.5	0.000000000022	tesA; acyl-CoA thioesterase I [EC:3.1.2.- 3.1.2.2 3.1.1.2 3.1.1.5]	N/A
PHROG	UHGV-1853150_42	phrog_5240	75.7	7.6e-22	tail fiber protein	tail
UniRef90	UHGV-1853150_42	UniRef90_A0A843HZK1	89.4	0.00000000000000375	SGNH_hydro domain-containing protein	N/A
eggNOG-mapper	UHGV-1853150_42	349123.Lreu23DRAFT_3172	65.1	0.0000000392	N/A	N/A
Pfam	UHGV-1853150_42	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
PHROG	UHGV-1853150_43	phrog_14030	167.1	0	N/A	unknown function
UniRef90	UHGV-1853150_43	UniRef90_A0A6N3GLP8	660.0	0	Phage_lysozyme2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1853150_43	33035.JPJF01000093_gene2240	374.0	0	NlpC/P60 family	N/A
Pfam	UHGV-1853150_43	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
COG	UHGV-1853150_43	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1853150_43	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_44	phrog_13289	402.8	0	tail protein	tail
UniRef90	UHGV-1853150_44	UniRef90_A0A412C574	1014.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1853150_44	1235798.C817_02568	474.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1853150_44	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1853150_44	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1853150_44	COG2885	N/A	N/A	Outer membrane protein OmpA and related peptidoglycan-associated (lipo)proteins	N/A
structural_annotation	UHGV-1853150_44	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_45	phrog_33	79.5	7.9e-23	distal tail protein Dit	tail
UniRef90	UHGV-1853150_45	UniRef90_UPI000E2F9A85	288.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1853150_45	1235798.C817_04593	233.0	0	phage tail	N/A
Pfam	UHGV-1853150_45	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
NCBIFam	UHGV-1853150_45	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1853150_45	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1853150_45	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1853150_46	phrog_58	135.7	4.9e-40	tail length tape measure protein	tail
COG	UHGV-1853150_46	COG5283	N/A	N/A	Phage-related tail protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1853150	Yes	30,733	39	74	1