vOTU vOTU-095879

vOTU: vOTU-095879

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-095879
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Taxonomy (UHGV)	vFAM-00035 → vSUBFAM-00161 → vGENUS-00201 → vOTU-095879
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0159113
Biosample ID	SAMN06110420
Genome length (bp)	24,736 bps
CheckV completeness	64.08% (Medium-quality)
CDS count	42
CDS density	92.06%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	2131	Host agreement	99.3
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	221	Host agreement	93.21

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 64.08)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0159113_1	411468.CLOSCI_01453	60.1	0.000000000167	Phage integrase family	N/A
COG	UHGV-0159113_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
PHROG	UHGV-0159113_2	phrog_37629	424.6	0	N/A	unknown function
UniRef90	UHGV-0159113_2	UniRef90_UPI00164AD29E	70.5	0.00000000000425	HIRAN domain-containing protein	N/A
eggNOG-mapper	UHGV-0159113_2	411468.CLOSCI_01454	300.0	0	N/A	N/A
structural_annotation	UHGV-0159113_2	PF08797	N/A	N/A	N/A	N/A
KOfam	UHGV-0159113_3	K23779	59.1	1.4e-16	sutR; XRE family transcriptional regulator, regulator of sulfur utilization	N/A
PHROG	UHGV-0159113_3	phrog_3	47.9	0.00000000000062	transcriptional repressor	transcription regulation
UniRef90	UHGV-0159113_3	UniRef90_UPI0001FAC2C6	127.0	1.95e-37	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0159113_3	742741.HMPREF9475_00399	127.0	3.27e-38	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0159113_3	retron_type_VI_hth_cluster2_1	45.1	0.0000000000029	N/A	Retron
Pfam	UHGV-0159113_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0159113_3	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0159113_5	K22300	64.4	2.9e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0159113_5	phrog_8	56.1	2.8e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0159113_5	UniRef90_A0A417Q805	237.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0159113_5	742741.HMPREF9475_00400	226.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0159113_5	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0159113_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0159113_5	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_7	phrog_35340	240.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0159113_7	411468.CLOSCI_01464	233.0	0	N/A	N/A
PHROG	UHGV-0159113_8	phrog_6058	70.8	1.4e-20	N/A	unknown function
eggNOG-mapper	UHGV-0159113_8	411468.CLOSCI_01465	144.0	1.12104e-44	N/A	N/A
structural_annotation	UHGV-0159113_8	PF12728,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_9	phrog_36092	141.6	1.00053e-42	N/A	unknown function
eggNOG-mapper	UHGV-0159113_9	411468.CLOSCI_01466	102.0	1.21e-28	N/A	N/A
PHROG	UHGV-0159113_10	phrog_3584	312.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0159113_10	UniRef90_A0A4P8IFK4	358.0	0	N/A	N/A
eggNOG-mapper	UHGV-0159113_10	742741.HMPREF9475_00404	623.0	0	N/A	N/A
structural_annotation	UHGV-0159113_10	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0159113_11	K08309	55.7	0.000000000000001	slt; soluble lytic murein transglycosylase [EC:4.2.2.-]	N/A
PHROG	UHGV-0159113_11	phrog_19890	432.1	0	N/A	unknown function
UniRef90	UHGV-0159113_11	UniRef90_A0A0M6WRS2	457.0	0	SLT domain-containing protein	N/A
eggNOG-mapper	UHGV-0159113_11	742741.HMPREF9475_00405	474.0	0	Transglycosylase SLT domain	N/A
Pfam	UHGV-0159113_11	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0159113_11	COG0741	N/A	N/A	Soluble lytic murein transglycosylase or regulatory protein s ( may contain LysM/invasin domain)	N/A
structural_annotation	UHGV-0159113_11	PF01464,MF_01381,NF011856,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_12	phrog_38136	134.5	2.29999e-40	N/A	unknown function
eggNOG-mapper	UHGV-0159113_12	411468.CLOSCI_01471	109.0	1.77e-31	N/A	N/A
PHROG	UHGV-0159113_13	phrog_824	164.3	0	N/A	unknown function
UniRef90	UHGV-0159113_13	UniRef90_UPI00164B300C	275.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0159113_13	742741.HMPREF9475_00407	275.0	0	VRR_NUC	N/A
Pfam	UHGV-0159113_13	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0159113_13	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_14	phrog_20014	174.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0159113_14	742741.HMPREF9475_00408	192.0	0	N/A	N/A
PHROG	UHGV-0159113_15	phrog_30011	130.7	3e-39	N/A	unknown function
KOfam	UHGV-0159113_16	K03496	165.6	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0159113_16	phrog_164	151.5	7.00649e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0159113_16	UniRef90_B0NDE7	504.0	0	Chromosome partitioning protein ParA	N/A
eggNOG-mapper	UHGV-0159113_16	411468.CLOSCI_01475	504.0	0	Cellulose biosynthesis protein BcsQ	N/A
Pfam	UHGV-0159113_16	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0159113_16	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0159113_16	PF13614,MF_00533,NF010443,COG1192	N/A	N/A	N/A	N/A
UniRef90	UHGV-0159113_18	UniRef90_A0A1Q6JLU8	206.0	0	PH domain-containing protein	N/A
eggNOG-mapper	UHGV-0159113_18	411470.RUMGNA_00212	62.0	0.000000000994	N/A	N/A
PHROG	UHGV-0159113_20	phrog_24368	200.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0159113_20	742741.HMPREF9475_00412	165.0	0	N/A	N/A
PHROG	UHGV-0159113_21	phrog_37044	233.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0159113_21	411468.CLOSCI_01479	200.0	0	N/A	N/A
KOfam	UHGV-0159113_22	K03497	61.2	1e-17	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0159113_22	phrog_15982	625.7	0	N/A	unknown function
UniRef90	UHGV-0159113_22	UniRef90_A0A412Q2H3	732.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0159113_22	742741.HMPREF9475_00414	626.0	0	N/A	N/A
Pfam	UHGV-0159113_22	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0159113_22	PF12961	N/A	N/A	N/A	DUF3850
COG	UHGV-0159113_22	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0159113_22	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
KOfam	UHGV-0159113_24	K07171	117.2	1.7e-34	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0159113_24	phrog_1936	192.5	0	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0159113_24	UniRef90_A0A174ZJ51	327.0	0	mRNA interferase EndoA	N/A
eggNOG-mapper	UHGV-0159113_24	742741.HMPREF9475_00415	239.0	0	PemK-like, MazF-like toxin of type II toxin-antitoxin system	N/A
Pfam	UHGV-0159113_24	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0159113_24	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0159113_24	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_25	phrog_34936	270.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0159113_25	742741.HMPREF9475_00416	254.0	0	N/A	N/A
KOfam	UHGV-0159113_26	K03111	130.2	2.7e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0159113_26	phrog_44	130.5	1.3e-38	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0159113_26	UniRef90_A0A1C5T550	281.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0159113_26	411468.CLOSCI_01483	243.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0159113_26	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0159113_26	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0159113_26	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0159113_26	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0159113_26	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_27	phrog_36526	66.2	6.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-0159113_27	742741.HMPREF9475_00418	63.9	0.000000000021	N/A	N/A
PHROG	UHGV-0159113_28	phrog_1558	126.0	2.7e-37	N/A	unknown function
eggNOG-mapper	UHGV-0159113_28	742741.HMPREF9475_00419	243.0	0	N/A	N/A
structural_annotation	UHGV-0159113_28	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_29	phrog_144	88.0	1.1e-25	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0159113_29	UniRef90_B0NDF8	270.0	0	HNH endonuclease domain protein	N/A
eggNOG-mapper	UHGV-0159113_29	411468.CLOSCI_01486	270.0	0	N/A	N/A
PHROG	UHGV-0159113_30	phrog_83	116.3	1.9e-34	terminase small subunit	head and packaging
UniRef90	UHGV-0159113_30	UniRef90_A0A3R5XN18	342.0	0	Phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0159113_30	411468.CLOSCI_01487	307.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0159113_30	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
NCBIFam	UHGV-0159113_30	TIGR01558.1	N/A	N/A	phage terminase small subunit P27 family	N/A
COG	UHGV-0159113_30	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0159113_30	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_31	phrog_9	373.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0159113_31	UniRef90_A0A174ZPG1	1211.0	0	Phage terminase-like protein, large subunit	N/A
eggNOG-mapper	UHGV-0159113_31	742741.HMPREF9475_00422	1073.0	0	Phage Terminase	N/A
Pfam	UHGV-0159113_31	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0159113_31	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0159113_31	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0159113_31	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_32	phrog_12	281.7	0	portal protein	head and packaging
UniRef90	UHGV-0159113_32	UniRef90_A0A174ZQ67	885.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0159113_32	411468.CLOSCI_01489	740.0	0	Phage portal protein	N/A
Pfam	UHGV-0159113_32	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0159113_32	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0159113_32	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0159113_32	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0159113_33	K01358	109.8	3.6e-32	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0159113_33	phrog_94	213.2	0	head maturation protease	head and packaging
UniRef90	UHGV-0159113_33	UniRef90_A0A1C5T576	549.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0159113_33	742741.HMPREF9475_00424	488.0	0	Clp protease	N/A
Pfam	UHGV-0159113_33	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0159113_33	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0159113_33	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_34	phrog_10	241.0	0	major head protein	head and packaging
UniRef90	UHGV-0159113_34	UniRef90_A0A174ZQ75	786.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-0159113_34	411468.CLOSCI_01491	571.0	0	Phage capsid family	N/A
Pfam	UHGV-0159113_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0159113_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0159113_34	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0159113_34	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0159113_35	UniRef90_A0A5S4VQ23	205.0	0	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0159113_35	411468.CLOSCI_01492	119.0	1.41e-33	N/A	N/A
NCBIFam	UHGV-0159113_35	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0159113_35	PF05135,TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0159113_36	UniRef90_A0A412T7B5	213.0	0	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-0159113_36	742741.HMPREF9475_00427	138.0	2.89999e-41	Phage head-tail joining protein	N/A
Pfam	UHGV-0159113_36	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0159113_36	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0159113_36	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_37	phrog_5	52.2	0.000000000000018	tail completion or Neck1 protein	connector
UniRef90	UHGV-0159113_37	UniRef90_B0NDG6	222.0	0	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0159113_37	411468.CLOSCI_01494	222.0	0	Phage protein, HK97 gp10 family	N/A
NCBIFam	UHGV-0159113_37	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0159113_37	PF04883,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_38	phrog_78	56.6	5.7e-16	tail terminator	connector
eggNOG-mapper	UHGV-0159113_38	411468.CLOSCI_01495	210.0	0	N/A	N/A
structural_annotation	UHGV-0159113_38	PF05657,NF040576,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_39	phrog_88	151.3	4.2039e-45	major tail protein	tail
UniRef90	UHGV-0159113_39	UniRef90_A0A412T728	400.0	0	Major tail protein	N/A
eggNOG-mapper	UHGV-0159113_39	411468.CLOSCI_01496	345.0	0	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0159113_39	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0159113_39	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0159113_39	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_40	phrog_13494	127.2	5.2e-38	N/A	unknown function
eggNOG-mapper	UHGV-0159113_40	411468.CLOSCI_01497	147.0	7.00649e-45	N/A	N/A
structural_annotation	UHGV-0159113_40	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_41	phrog_25901	257.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0159113_41	411468.CLOSCI_01498	237.0	0	N/A	N/A
structural_annotation	UHGV-0159113_41	PF10109	N/A	N/A	N/A	N/A
PHROG	UHGV-0159113_42	phrog_1533	161.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0159113_42	UniRef90_UPI00040DFCD5	244.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0159113_42	411468.CLOSCI_01499	634.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0159113_42	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0159113_42	COG3206	N/A	N/A	Exopolysaccharide export protein/domain GumC/Wzc1	N/A
structural_annotation	UHGV-0159113_42	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0159113	Yes	24,736	45	64	1