vOTU vOTU-096565

vOTU: vOTU-096565

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-096565
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103 → CAG-103 sp000432375
Taxonomy (UHGV)	vFAM-00040 → vSUBFAM-00658 → vGENUS-00533 → vOTU-096565
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1419161
Biosample ID	SAMN00143514
Genome length (bp)	23,240 bps
CheckV completeness	62.95% (Medium-quality)
CDS count	31
CDS density	87.31%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	106	Host agreement	96.23
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103 → CAG-103 sp000432375	Total connections	36	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.95)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1419161_3	K18830	65.4	1.1e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1419161_3	phrog_8	51.9	0.0000000000000091	transcriptional regulator	transcription regulation
UniRef90	UHGV-1419161_3	UniRef90_UPI001899F946	141.0	4.00001e-41	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1419161_3	445972.ANACOL_03315	132.0	3.99e-38	N/A	N/A
Pfam	UHGV-1419161_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1419161_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1419161_3	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1419161_5	K14059	151.2	1.26117e-44	int; integrase	N/A
PHROG	UHGV-1419161_5	phrog_1	150.8	1.12104e-44	integrase	integration and excision
UniRef90	UHGV-1419161_5	UniRef90_A0A2Z4QB94	333.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1419161_5	626523.GCWU000342_00320	94.0	7.85e-19	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1419161_5	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1419161_5	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1419161_5	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1419161_6	UniRef90_UPI00164AED9E	95.9	1.65e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1419161_6	1235798.C817_04600	80.9	2.18e-18	N/A	N/A
structural_annotation	UHGV-1419161_6	NF040522,COG2944	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1419161_8	PF17917	N/A	N/A	N/A	N/A
PHROG	UHGV-1419161_9	phrog_15863	169.3	0	N/A	unknown function
UniRef90	UHGV-1419161_9	UniRef90_K1RTM4	225.0	0	DnaJ domain protein	N/A
eggNOG-mapper	UHGV-1419161_9	693746.OBV_01780	180.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-1419161_9	PF00226	N/A	N/A	DnaJ domain	DnaJ
COG	UHGV-1419161_9	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-1419161_10	PF01402,NF040976,COG4710	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1419161_11	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1419161_12	phrog_7339	133.5	1.4e-39	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1419161_12	UniRef90_A0A8F2F0X6	269.0	0	Metallophosphoesterase	N/A
eggNOG-mapper	UHGV-1419161_12	443254.Marpi_0340	107.0	5.85e-25	metallophosphoesterase	N/A
Pfam	UHGV-1419161_12	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1419161_12	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-1419161_12	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
KOfam	UHGV-1419161_14	K06909	132.1	5.2e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1419161_14	phrog_979	135.6	1.29998e-41	terminase large subunit	head and packaging
UniRef90	UHGV-1419161_14	UniRef90_A0A1M5YHQ5	644.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1419161_14	693746.OBV_01690	520.0	0	phage Terminase large subunit	N/A
Pfam	UHGV-1419161_14	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-1419161_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1419161_14	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1419161_16	phrog_156	140.8	2.90069e-42	portal protein	head and packaging
eggNOG-mapper	UHGV-1419161_16	693746.OBV_01670	555.0	0	N/A	N/A
structural_annotation	UHGV-1419161_16	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1419161_18	phrog_422	120.4	1.5e-35	major head protein	head and packaging
UniRef90	UHGV-1419161_18	UniRef90_K1S1E0	367.0	0	Gp7 (Fragment)	N/A
eggNOG-mapper	UHGV-1419161_18	693746.OBV_01700	214.0	0	N/A	N/A
Pfam	UHGV-1419161_18	PF13287	N/A	N/A	Fn3 associated	Fn3_assoc
structural_annotation	UHGV-1419161_18	PF19821,PF13287,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1419161_19	1519439.JPJG01000011_gene57	89.7	7.22e-21	N/A	N/A
structural_annotation	UHGV-1419161_19	PF11650	N/A	N/A	N/A	N/A
UniRef90	UHGV-1419161_20	UniRef90_A0A4D7ASB8	444.0	0	N/A	N/A
eggNOG-mapper	UHGV-1419161_20	693746.OBV_01680	476.0	0	N/A	N/A
structural_annotation	UHGV-1419161_20	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
PHROG	UHGV-1419161_21	phrog_892	48.1	2.2e-29	tail fiber protein	tail
structural_annotation	UHGV-1419161_22	PF10651,NF038186	N/A	N/A	N/A	N/A
COG	UHGV-1419161_23	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
eggNOG-mapper	UHGV-1419161_26	1235797.C816_04174	169.0	0	N/A	N/A
structural_annotation	UHGV-1419161_26	PF14600	N/A	N/A	N/A	N/A
KOfam	UHGV-1419161_27	K01447	121.6	9e-36	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1419161_27	phrog_9611	144.5	5.89947e-43	endolysin	lysis
UniRef90	UHGV-1419161_27	UniRef90_A0A3D1VCL7	458.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-1419161_27	97138.C820_00738	244.0	0	Ami_2	N/A
Pfam	UHGV-1419161_27	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1419161_27	COG3023	N/A	N/A	N-acetyl-anhydromuramyl-L-alanine amidase AmpD	N/A
structural_annotation	UHGV-1419161_27	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1419161_28	phrog_962	82.2	6.6e-24	holin	lysis
UniRef90	UHGV-1419161_28	UniRef90_A0A3R5XPP7	106.0	2.49e-28	Phage holin	N/A
eggNOG-mapper	UHGV-1419161_28	553973.CLOHYLEM_04415	98.6	5.36e-26	Bacteriophage holin	N/A
Pfam	UHGV-1419161_28	PF04531	N/A	N/A	Bacteriophage holin	Phage_holin_1
NCBIFam	UHGV-1419161_28	TIGR01598.1	N/A	N/A	phage holin	N/A
COG	UHGV-1419161_28	COG5546	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1419161_28	COG5546	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1419161_30	693746.OBV_01600	90.5	4.97e-17	N/A	N/A
eggNOG-mapper	UHGV-1419161_31	693746.OBV_01590	75.9	0.00000000000189	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1419161	Yes	23,240	58	63	1