vOTU vOTU-096694

vOTU: vOTU-096694

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-096694
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00318 → vGENUS-14121 → vOTU-096694
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea_A → Dorea_A longicatena
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0109039
Biosample ID	SAMEA3708860
Genome length (bp)	42,477 bps
CheckV completeness	71.36% (Medium-quality)
CDS count	64
CDS density	87.18%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea_A → Dorea_A longicatena	Total connections	245	Host agreement	77.55
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea_A → Dorea_A longicatena	Total connections	5	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 71.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0109039_1	phrog_18593	55.4	0.0000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-0109039_1	411460.RUMTOR_02099	63.5	0.0000000000268	N/A	N/A
Pfam	UHGV-0109039_1	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
PHROG	UHGV-0109039_2	phrog_19695	49.0	0.00000000000018	N/A	unknown function
eggNOG-mapper	UHGV-0109039_2	478749.BRYFOR_08558	85.9	1.94e-20	N/A	N/A
structural_annotation	UHGV-0109039_2	PF19714	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_3	phrog_20274	154.6	0	N/A	unknown function
UniRef90	UHGV-0109039_3	UniRef90_A0A173TUK0	286.0	0	Predicted membrane protein	N/A
eggNOG-mapper	UHGV-0109039_3	1235799.C818_04238	184.0	0	Putative ABC-transporter type IV	N/A
Pfam	UHGV-0109039_3	PF06541	N/A	N/A	Putative ABC-transporter type IV	ABC_trans_CmpB
COG	UHGV-0109039_3	COG4905	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109039_3	PF06541,COG4905	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_4	phrog_1348	40.2	0.000000000062	tail fiber protein	tail
UniRef90	UHGV-0109039_4	UniRef90_UPI001D07CA50	153.0	2.90069e-43	acyl carrier protein	N/A
eggNOG-mapper	UHGV-0109039_4	1235799.C818_04237	283.0	0	N/A	N/A
structural_annotation	UHGV-0109039_4	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_6	phrog_18725	47.6	0.00000000000032	N/A	unknown function
eggNOG-mapper	UHGV-0109039_6	585501.HMPREF6123_0822	107.0	5.86e-28	N/A	N/A
PHROG	UHGV-0109039_7	phrog_13879	301.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0109039_7	742740.HMPREF9474_03516	487.0	0	N/A	N/A
structural_annotation	UHGV-0109039_7	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_8	phrog_1194	76.9	2.6e-22	N/A	unknown function
eggNOG-mapper	UHGV-0109039_8	742740.HMPREF9474_03515	142.0	4.09039e-42	N/A	N/A
structural_annotation	UHGV-0109039_8	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_9	phrog_167	378.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0109039_9	UniRef90_A0A173S7X9	2338.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0109039_9	1232453.BAIF02000058_gene1637	353.0	0	phage tail tape measure protein	N/A
Pfam	UHGV-0109039_9	PF01464	N/A	N/A	Transglycosylase SLT domain	SLT
COG	UHGV-0109039_9	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0109039_9	NF012014	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109039_11	PF16478	N/A	N/A	N/A	N/A
KOfam	UHGV-0109039_12	K07448	140.4	1.6e-41	mrr; restriction system protein	N/A
PHROG	UHGV-0109039_12	phrog_19856	49.9	0.000000000000038	N/A	unknown function
UniRef90	UHGV-0109039_12	UniRef90_A0A173S6M0	551.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-0109039_12	397290.C810_01426	151.0	4.65e-40	Restriction endonuclease	N/A
PADLOC	UHGV-0109039_12	ZorD1_00005	77.7	1.3e-22	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0109039_12	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
COG	UHGV-0109039_12	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
PHROG	UHGV-0109039_13	phrog_158	54.3	0.000000000000003	major tail protein	tail
UniRef90	UHGV-0109039_13	UniRef90_A0A173S6H2	271.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0109039_13	1232453.BAIF02000058_gene1634	142.0	1.49e-41	N/A	N/A
Pfam	UHGV-0109039_13	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-0109039_13	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109039_14	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_15	phrog_5	41.1	0.000000000043	tail completion or Neck1 protein	connector
UniRef90	UHGV-0109039_15	UniRef90_UPI001BBD4500	212.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0109039_15	397290.C810_01411	100.0	3e-24	N/A	N/A
AcrCatalog	UHGV-0109039_15	cluster_24841	70.5	2.49e-17	NA	N/A
structural_annotation	UHGV-0109039_15	PF17395,TIGR01725	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0109039_16	1232453.BAIF02000058_gene1630	129.0	5.43e-37	N/A	N/A
structural_annotation	UHGV-0109039_16	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0109039_17	397290.C810_01402	77.4	6.73e-17	N/A	N/A
Pfam	UHGV-0109039_17	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
PHROG	UHGV-0109039_18	phrog_1328	118.1	5e-35	major head protein	head and packaging
UniRef90	UHGV-0109039_18	UniRef90_UPI001D096CC5	530.0	0	N/A	N/A
eggNOG-mapper	UHGV-0109039_18	665956.HMPREF1032_03619	214.0	0	N/A	N/A
Pfam	UHGV-0109039_18	PF17236	N/A	N/A	N/A	DUF5309
Pfam	UHGV-0109039_18	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0109039_18	PF17236,PF18316,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109039_19	UniRef90_A0A7C7EK05	88.6	1.76e-18	N/A	N/A
PHROG	UHGV-0109039_20	phrog_64	201.7	0	portal protein	head and packaging
UniRef90	UHGV-0109039_20	UniRef90_UPI00156EA9F5	745.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0109039_20	1121866.AUGK01000003_gene1429	221.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0109039_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0109039_20	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_21	phrog_36	40.5	0.000000000053	transcriptional regulator	transcription regulation
UniRef90	UHGV-0109039_21	UniRef90_A0A173S6N5	242.0	0	RNA polymerase sigma factor, sigma-70 family	N/A
eggNOG-mapper	UHGV-0109039_21	1232453.BAIF02000058_gene1624	139.0	1.63e-40	N/A	N/A
structural_annotation	UHGV-0109039_21	PF04545,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_22	phrog_38	147.5	1.09301e-43	terminase large subunit	head and packaging
UniRef90	UHGV-0109039_22	UniRef90_A0A415D4U9	887.0	0	DOD-type homing endonuclease domain-containing protein	N/A
eggNOG-mapper	UHGV-0109039_22	1298920.KI911353_gene2682	766.0	0	TIGRFAM Phage	N/A
COG	UHGV-0109039_22	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109039_22	PF17289,PF04466,MF_04147,NF033889,COG5410,COG5362	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109039_24	UniRef90_A0A3E3JYB1	95.1	1.4e-24	Conjugal transfer protein	N/A
Pfam	UHGV-0109039_24	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
structural_annotation	UHGV-0109039_24	PF14205	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_25	phrog_2428	95.9	3.3e-28	N/A	unknown function
UniRef90	UHGV-0109039_25	UniRef90_A0A396QA65	246.0	0	ABC transporter ATPase	N/A
eggNOG-mapper	UHGV-0109039_25	632245.CLP_1645	189.0	0	N/A	N/A
dbAPIS	UHGV-0109039_25	APIS024	N/A	N/A	Tad1 proteins are not an enzymes, but are 'sponges' that bind and sequester the immune signaling molecule (cyclic ADP-ribose or gcADPR) produced by TIR-domain proteins, thus decoupling phage sensing from immune effector activation and rendering Thoeris inactive.	N/A
PHROG	UHGV-0109039_26	phrog_355	62.3	7.5e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0109039_26	UniRef90_A0A396KGT7	209.0	0	N/A	N/A
eggNOG-mapper	UHGV-0109039_26	97138.C820_00250	131.0	1.75e-38	N/A	N/A
Pfam	UHGV-0109039_26	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0109039_26	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_27	phrog_1048	168.6	0	N/A	unknown function
UniRef90	UHGV-0109039_27	UniRef90_UPI001C01A84D	251.0	0	N/A	N/A
eggNOG-mapper	UHGV-0109039_27	457412.RSAG_01107	170.0	0	N/A	N/A
Pfam	UHGV-0109039_27	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0109039_27	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0109039_27	PF11195	N/A	N/A	N/A	N/A
KOfam	UHGV-0109039_28	K04087	77.4	1.6e-22	hflC; modulator of FtsH protease HflC	N/A
PHROG	UHGV-0109039_28	phrog_200	154.2	1.4013e-45	lipoprotein	other
UniRef90	UHGV-0109039_28	UniRef90_C0BA46	383.0	0	SPFH/Band 7/PHB domain protein	N/A
eggNOG-mapper	UHGV-0109039_28	537007.BLAHAN_05484	284.0	0	prohibitin homologues	N/A
Pfam	UHGV-0109039_28	PF01145	N/A	N/A	SPFH domain / Band 7 family	Band_7
COG	UHGV-0109039_28	COG0330	N/A	N/A	Regulator of protease activity HflC, stomatin/prohibitin superfamily	N/A
structural_annotation	UHGV-0109039_28	PF01145,MF_01562,NF008181,COG0330	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109039_32	PF06004,NF033216,COG4568	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0109039_33	476272.RUMHYD_01907	86.3	3.4e-18	N/A	N/A
UniRef90	UHGV-0109039_34	UniRef90_A0A317U8P7	137.0	4.64e-38	GIY-YIG domain-containing protein	N/A
Pfam	UHGV-0109039_34	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
structural_annotation	UHGV-0109039_34	PF01541,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_35	phrog_31631	55.6	7.6e-16	N/A	unknown function
UniRef90	UHGV-0109039_37	UniRef90_A0A893WAT2	573.0	0	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0109039_37	500632.CLONEX_04013	451.0	0	DnaJ molecular chaperone homology domain	N/A
Pfam	UHGV-0109039_37	PF18847	N/A	N/A	Large polyvalent protein associated domain 29	LPD29
COG	UHGV-0109039_37	COG2214	N/A	N/A	Curved DNA-binding protein CbpA, contains a DnaJ-like domain	N/A
structural_annotation	UHGV-0109039_37	PF18847	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109039_41	UniRef90_A0A843H561	87.8	1.99e-19	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0109039_41	592031.GCWU000322_00057	75.5	0.0000000000000512	N/A	N/A
structural_annotation	UHGV-0109039_41	PF13058,MF_00745	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_42	phrog_236	73.1	8.5e-21	nucleotide kinase	other
UniRef90	UHGV-0109039_42	UniRef90_UPI00189A6F6F	97.8	1.47e-24	N/A	N/A
eggNOG-mapper	UHGV-0109039_42	641149.HMPREF9016_01178	62.4	0.0000000000444	N/A	N/A
Pfam	UHGV-0109039_42	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0109039_42	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_43	phrog_229	121.5	3.3e-36	MazG-like pyrophosphatase	other
UniRef90	UHGV-0109039_43	UniRef90_A0A173S9L2	280.0	0	MazG nucleotide pyrophosphohydrolase domain	N/A
eggNOG-mapper	UHGV-0109039_43	428125.CLOLEP_01391	100.0	8.35e-26	MazG nucleotide pyrophosphohydrolase domain	N/A
Pfam	UHGV-0109039_43	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
COG	UHGV-0109039_43	COG1694	N/A	N/A	NTP pyrophosphatase, house-cleaning of non-canonical NTPs	N/A
structural_annotation	UHGV-0109039_43	PF03819,MF_01020,TIGR03188,COG1694	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_45	phrog_3154	42.9	0.0000000000074	N/A	unknown function
UniRef90	UHGV-0109039_45	UniRef90_UPI000CF8F0F1	288.0	0	N/A	N/A
eggNOG-mapper	UHGV-0109039_45	97139.C824_02654	92.0	1.67e-22	N/A	N/A
Pfam	UHGV-0109039_45	PF07866	N/A	N/A	N/A	DUF1653
COG	UHGV-0109039_45	COG4728	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109039_45	PF07866,COG4728	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_47	phrog_8684	87.5	1.7e-26	N/A	unknown function
UniRef90	UHGV-0109039_47	UniRef90_A0A373MXN9	301.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0109039_47	457412.RSAG_01162	170.0	0	YopX protein	N/A
Pfam	UHGV-0109039_47	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-0109039_47	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_50	phrog_599	51.4	0.000000000000028	Lar-like restriction alleviation protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0109039_50	UniRef90_A0A173SAG0	179.0	0	Restriction alleviation protein, Lar family	N/A
eggNOG-mapper	UHGV-0109039_50	97139.C824_00027	59.7	0.0000000000928	Restriction alleviation protein Lar	N/A
Pfam	UHGV-0109039_50	PF14354	N/A	N/A	Restriction alleviation protein Lar	Lar_restr_allev
NCBIFam	UHGV-0109039_50	TIGR03655.1	N/A	N/A	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0109039_50	PF14354	N/A	N/A	N/A	N/A
UniRef90	UHGV-0109039_51	UniRef90_UPI001B3C5B03	93.6	5.59e-23	N/A	N/A
PHROG	UHGV-0109039_52	phrog_25456	61.9	4.9e-21	N/A	unknown function
PHROG	UHGV-0109039_54	phrog_2600	114.5	1.3e-33	N/A	unknown function
UniRef90	UHGV-0109039_54	UniRef90_A0A401UUL1	153.0	2.25049e-42	N/A	N/A
eggNOG-mapper	UHGV-0109039_54	1298920.KI911353_gene2720	172.0	0	N/A	N/A
structural_annotation	UHGV-0109039_56	PF20020	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_58	phrog_9298	364.4	0	radical SAM domain protein	other
UniRef90	UHGV-0109039_58	UniRef90_UPI00156DBFFE	612.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-0109039_58	1235793.C809_02647	425.0	0	N/A	N/A
COG	UHGV-0109039_58	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-0109039_58	MF_01864,NF010916,COG2516	N/A	N/A	N/A	N/A
KOfam	UHGV-0109039_59	K24451	127.4	1.3e-37	zim; modification methylase	N/A
PHROG	UHGV-0109039_59	phrog_67	114.2	9.4e-34	DNA methyltransferase	other
UniRef90	UHGV-0109039_59	UniRef90_A0A374BT14	624.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0109039_59	411473.RUMCAL_00273	494.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0109039_59	MTase_II_00139	120.1	3.8e-35	Type II methyltransferase	RM
Pfam	UHGV-0109039_59	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0109039_59	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0109039_59	PF01555,MF_01872,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0109039_60	K14440	41.4	1.1e-19	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0109039_60	phrog_16	200.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0109039_60	UniRef90_A0A374BUX3	858.0	0	Helicase	N/A
eggNOG-mapper	UHGV-0109039_60	411473.RUMCAL_00274	665.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0109039_60	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0109039_60	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0109039_60	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0109039_60	PF18766,PF16203,MF_01821,TIGR04095,COG0553	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0109039_61	PF17354	N/A	N/A	N/A	N/A
PHROG	UHGV-0109039_63	phrog_7488	44.5	0.000000000003	N/A	unknown function
UniRef90	UHGV-0109039_64	UniRef90_UPI0018979093	460.0	0	N/A	N/A
eggNOG-mapper	UHGV-0109039_64	411460.RUMTOR_01556	421.0	0	N/A	N/A
Pfam	UHGV-0109039_64	PF14199	N/A	N/A	N/A	DUF4317
structural_annotation	UHGV-0109039_64	PF14199,MF_00730,NF001557,COG3081	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0109039	Yes	42,477	39	71	1