vOTU vOTU-097060

vOTU: vOTU-097060

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-097060
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00026 → vGENUS-02761 → vOTU-097060
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0376494
Biosample ID	SAMN09605432
Genome length (bp)	40,115 bps
CheckV completeness	70.21% (Medium-quality)
CDS count	67
CDS density	91.97%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	3273	Host agreement	90.07
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.21)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0376494_1	UniRef90_A0A8D9UIR9	149.0	1.4013e-45	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-0376494_2	phrog_64	164.7	0	portal protein	head and packaging
UniRef90	UHGV-0376494_2	UniRef90_R7BGE4	769.0	0	SPP1 family phage portal protein	N/A
eggNOG-mapper	UHGV-0376494_2	1298920.KI911353_gene2663	477.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0376494_2	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0376494_2	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
UniRef90	UHGV-0376494_3	UniRef90_R6C0B6	119.0	8.68e-31	Phage capsid scaffolding protein	N/A
PHROG	UHGV-0376494_4	phrog_909	47.2	0.00000000000037	major head protein	head and packaging
eggNOG-mapper	UHGV-0376494_4	1298920.KI911353_gene2661	123.0	6.59e-35	N/A	N/A
PHROG	UHGV-0376494_5	phrog_29	165.0	0	major head protein	head and packaging
UniRef90	UHGV-0376494_5	UniRef90_UPI001D02C54B	671.0	0	major capsid protein	N/A
eggNOG-mapper	UHGV-0376494_5	1298920.KI911353_gene2660	345.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0376494_5	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0376494_5	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0376494_6	UniRef90_A0A416G2T8	53.1	0.000000187	Rho_N domain-containing protein	N/A
structural_annotation	UHGV-0376494_6	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0376494_7	397290.C810_01402	70.9	0.0000000000000352	N/A	N/A
PHROG	UHGV-0376494_8	phrog_1863	56.6	2.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0376494_8	742741.HMPREF9475_00442	63.2	0.0000000000163	N/A	N/A
PHROG	UHGV-0376494_9	phrog_18218	133.7	5.9e-40	N/A	unknown function
UniRef90	UHGV-0376494_9	UniRef90_A0A8D9PGR5	176.0	0	Holin	N/A
eggNOG-mapper	UHGV-0376494_9	411902.CLOBOL_03424	80.9	2.44e-18	N/A	N/A
eggNOG-mapper	UHGV-0376494_10	1298920.KI911353_gene2656	55.5	0.000000117	N/A	N/A
structural_annotation	UHGV-0376494_10	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0376494_12	1298920.KI911353_gene2654	181.0	0	N/A	N/A
AcrCatalog	UHGV-0376494_12	cluster_24841	88.2	5.59e-24	NA	N/A
structural_annotation	UHGV-0376494_13	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-0376494_14	UniRef90_A0A8D9PGN2	304.0	0	Major tail protein	N/A
structural_annotation	UHGV-0376494_14	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_15	phrog_36112	76.1	3.9e-22	N/A	unknown function
UniRef90	UHGV-0376494_15	UniRef90_A0A8D9PG71	245.0	0	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-0376494_15	1298920.KI911353_gene2651	97.1	3.48e-23	N/A	N/A
structural_annotation	UHGV-0376494_15	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_17	phrog_28918	75.8	3.7e-22	N/A	unknown function
UniRef90	UHGV-0376494_17	UniRef90_A0A8D9PGP0	658.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-0376494_17	1298920.KI911353_gene2649	169.0	7.8753e-43	tape measure	N/A
COG	UHGV-0376494_17	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0376494_17	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_18	phrog_314	88.3	7.8e-26	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0376494_18	UniRef90_UPI000CF201CD	268.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0376494_18	1126950.G9J202_9CAUD	85.1	1.21e-16	nucleic acid binding	N/A
Pfam	UHGV-0376494_18	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-0376494_18	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
NCBIFam	UHGV-0376494_18	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-0376494_18	PF07453,PF19835,PF04936,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_19	phrog_1535	68.0	8.4e-28	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0376494_19	483218.BACPEC_01146	172.0	4.7504e-42	domain protein	N/A
COG	UHGV-0376494_19	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
UniRef90	UHGV-0376494_20	UniRef90_A0A8D9UIY0	374.0	0	N/A	N/A
eggNOG-mapper	UHGV-0376494_20	881621.LIV_0548	59.3	0.0000000217	N/A	N/A
Pfam	UHGV-0376494_20	PF16729	N/A	N/A	N/A	DUF5067
structural_annotation	UHGV-0376494_20	PF16729,TIGR04087,COG3353	N/A	N/A	N/A	N/A
UniRef90	UHGV-0376494_21	UniRef90_A0A8D9UIV6	233.0	0	RNAse domain protein	N/A
PHROG	UHGV-0376494_23	phrog_1401	49.9	0.000000000000051	N/A	unknown function
structural_annotation	UHGV-0376494_23	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_24	phrog_6616	137.0	3.50325e-43	tail protein	tail
eggNOG-mapper	UHGV-0376494_24	1232453.BAIF02000058_gene1641	201.0	0	Phage minor structural protein	N/A
COG	UHGV-0376494_24	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0376494_24	PF05113,PF03944,NF033848,NF033675,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-0376494_26	K07273	146.0	3.50325e-43	acm; lysozyme	N/A
PHROG	UHGV-0376494_26	phrog_291	99.1	6.1e-29	endolysin	lysis
UniRef90	UHGV-0376494_26	UniRef90_A0A7U9NG87	221.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0376494_26	1235800.C819_00458	226.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0376494_26	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0376494_26	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0376494_26	PF01183,NF003627,COG3757,COG5492	N/A	N/A	N/A	N/A
KOfam	UHGV-0376494_29	K18830	68.6	1.3e-19	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0376494_29	phrog_8	57.9	2.2e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0376494_29	UniRef90_R7BIH5	148.0	7.9874e-44	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0376494_29	445972.ANACOL_03315	130.0	1.34e-37	N/A	N/A
Pfam	UHGV-0376494_29	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0376494_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0376494_29	PF01381,NF041951,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_30	phrog_32192	72.6	4.4e-21	N/A	unknown function
UniRef90	UHGV-0376494_30	UniRef90_UPI001D0221FF	131.0	2.79e-37	alanine-zipper protein	N/A
Pfam	UHGV-0376494_30	PF11839	N/A	N/A	Alanine-zipper, major outer membrane lipoprotein	Alanine_zipper
PHROG	UHGV-0376494_34	phrog_463	225.9	0	anti-repressor	transcription regulation
UniRef90	UHGV-0376494_34	UniRef90_A0A412RQX1	274.0	0	Phage repressor protein	N/A
eggNOG-mapper	UHGV-0376494_34	596329.HMPREF0631_1352	173.0	0	BRO family, N-terminal domain protein	N/A
Pfam	UHGV-0376494_34	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0376494_34	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0376494_34	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0376494_34	PF10552,PF02498,TIGR02681,COG3617	N/A	N/A	N/A	N/A
COG	UHGV-0376494_37	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0376494_37	PF10552	N/A	N/A	N/A	N/A
KOfam	UHGV-0376494_40	K03111	48.6	0.000000000000072	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0376494_40	phrog_26861	123.1	1.6e-36	N/A	unknown function
UniRef90	UHGV-0376494_40	UniRef90_A0A174ZUJ3	232.0	0	Helix-destabilizing protein	N/A
eggNOG-mapper	UHGV-0376494_40	515620.EUBELI_01590	232.0	0	N/A	N/A
Pfam	UHGV-0376494_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0376494_40	NF004476.0	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0376494_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0376494_40	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0376494_42	K19171	103.5	2.1e-30	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0376494_42	phrog_77	183.2	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0376494_42	UniRef90_R7BHE4	842.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0376494_42	1232453.BAIF02000057_gene1134	282.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0376494_42	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0376494_42	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0376494_42	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_43	phrog_1510	81.9	1.7e-24	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0376494_43	UniRef90_F8WPQ1	90.1	9.1e-22	Superinfection exclusion protein	N/A
eggNOG-mapper	UHGV-0376494_43	90371.CY43_01695	77.4	2.11e-17	Superinfection exclusion protein, bacteriophage P22	N/A
Pfam	UHGV-0376494_43	PF17420	N/A	N/A	Superinfection exclusion gene product 17	GP17
structural_annotation	UHGV-0376494_43	PF17420	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_46	phrog_2185	299.9	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0376494_46	UniRef90_UPI001BC46C39	491.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-0376494_46	658655.HMPREF0988_00886	382.0	0	N/A	N/A
Pfam	UHGV-0376494_46	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-0376494_46	NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_47	phrog_25456	93.3	3.6e-28	N/A	unknown function
PHROG	UHGV-0376494_48	phrog_392	108.2	1.1e-31	metal-dependent hydrolase	other
UniRef90	UHGV-0376494_48	UniRef90_A0A412RQX2	269.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-0376494_48	1232453.BAIF02000057_gene1138	121.0	8.42e-33	May be involved in the transport of PQQ or its precursor to the periplasm	N/A
COG	UHGV-0376494_48	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0376494_48	PF02112,MF_00457,NF041851,COG2220	N/A	N/A	N/A	N/A
UniRef90	UHGV-0376494_51	UniRef90_A0A415TX35	67.4	0.0000000000284	BAH domain-containing protein	N/A
eggNOG-mapper	UHGV-0376494_51	397290.C810_01492	99.4	1.29e-24	N/A	N/A
structural_annotation	UHGV-0376494_51	PF09038	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_53	phrog_20593	69.3	3.9e-20	N/A	unknown function
PHROG	UHGV-0376494_54	phrog_424	67.3	2.8e-19	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0376494_54	UniRef90_A0A1I0FEZ3	189.0	0	Phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0376494_54	903814.ELI_3131	191.0	0	sulfate reduction	N/A
COG	UHGV-0376494_54	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
PHROG	UHGV-0376494_55	phrog_19106	198.8	0	N/A	unknown function
UniRef90	UHGV-0376494_55	UniRef90_A0A412RQV5	236.0	0	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0376494_55	658655.HMPREF0988_00875	151.0	2.52234e-44	N/A	N/A
eggNOG-mapper	UHGV-0376494_56	397290.C810_01505	142.0	3.50325e-43	N/A	N/A
KOfam	UHGV-0376494_59	K00558	132.3	3.1e-39	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0376494_59	phrog_116	138.7	3.00004e-41	DNA methyltransferase	other
UniRef90	UHGV-0376494_59	UniRef90_A0A412KF70	520.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0376494_59	397290.C810_05213	321.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0376494_59	MTase_II_00058	153.0	4.2039e-45	Type II methyltransferase	RM
Pfam	UHGV-0376494_59	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0376494_59	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0376494_59	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0376494_59	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-0376494_60	K00558	40.9	0.000000000019	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0376494_60	phrog_16427	66.2	7.7e-19	DNA methyltransferase	other
UniRef90	UHGV-0376494_60	UniRef90_UPI001D094304	202.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0376494_60	120574.Q94M66_9CAUD	89.0	8.98e-19	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0376494_60	oMTase_00023	52.1	8.6e-19	orphan methyltransferase	RM
Pfam	UHGV-0376494_60	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
PHROG	UHGV-0376494_62	phrog_2514	83.2	2.3e-24	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0376494_62	UniRef90_A0A174WT25	119.0	1.34e-28	Replication initiator A domain-containing protein	N/A
eggNOG-mapper	UHGV-0376494_62	1120998.AUFC01000013_gene2941	148.0	3.23994e-41	N/A	N/A
structural_annotation	UHGV-0376494_62	PF09681,MF_01177,TIGR01714,COG1846	N/A	N/A	N/A	N/A
PHROG	UHGV-0376494_63	phrog_9804	153.1	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0376494_63	UniRef90_A0A292SPH8	320.0	0	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0376494_63	626523.GCWU000342_01038	130.0	5.95e-35	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0376494_63	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0376494_63	PF11417	N/A	N/A	N/A	N/A
UniRef90	UHGV-0376494_64	UniRef90_A0A8D9UJ07	265.0	0	Restriction endonuclease	N/A
Pfam	UHGV-0376494_64	PF18912	N/A	N/A	Double zinc ribbon domain	DZR_2
UniRef90	UHGV-0376494_66	UniRef90_A0A8D9PGK7	97.4	2.54e-25	Response regulator	N/A
structural_annotation	UHGV-0376494_66	PF00196,MF_00245,NF001067,COG2771	N/A	N/A	N/A	N/A
KOfam	UHGV-0376494_67	K14059	142.8	4.19969e-42	int; integrase	N/A
PHROG	UHGV-0376494_67	phrog_1	128.4	6.8e-38	integrase	integration and excision
UniRef90	UHGV-0376494_67	UniRef90_A0A8D9PGQ3	590.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0376494_67	411461.DORFOR_02986	349.0	0	N/A	N/A
Pfam	UHGV-0376494_67	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0376494_67	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0376494_67	PF00589,PF02920,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0376494	Yes	40,115	37	70	1