vOTU vOTU-097091

vOTU: vOTU-097091

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-097091
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA1417 → UBA1417 sp003531055
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01446 → vGENUS-01659 → vOTU-097091
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA1417 → UBA1417 sp003531055
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0175985
Biosample ID	SAMN09781782
Genome length (bp)	18,125 bps
CheckV completeness	50.26% (Medium-quality)
CDS count	35
CDS density	92.54%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA1417 → UBA1417 sp003531055	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 50.26)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0175985_2	K22300	67.9	2e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0175985_2	phrog_8	72.5	8.3e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0175985_2	UniRef90_A0A413RCW5	82.8	4.24e-18	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0175985_2	706433.HMPREF9430_01295	74.7	0.0000000000000145	N/A	N/A
PADLOC	UHGV-0175985_2	retron_type_VI_hth_cluster2_1	57.0	6e-16	N/A	Retron
Pfam	UHGV-0175985_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0175985_2	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0175985_2	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0175985_3	K07729	49.4	0.00000000000011	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-0175985_3	UniRef90_UPI000C7B18EF	87.4	2.04e-21	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0175985_3	1111454.HMPREF1250_1029	76.3	1.08e-17	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0175985_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0175985_3	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0175985_7	K01449	78.1	1.6e-22	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0175985_7	phrog_938	65.0	3.8e-19	endolysin	lysis
UniRef90	UHGV-0175985_7	UniRef90_R6DPB3	90.5	1.25e-19	Putative Cell wall hydrolase	N/A
eggNOG-mapper	UHGV-0175985_7	1274524.BSONL12_12176	70.1	0.00000000000179	COG3773 Cell wall hydrolyses involved in spore germination	N/A
Pfam	UHGV-0175985_7	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0175985_7	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-0175985_7	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
PHROG	UHGV-0175985_13	phrog_5070	186.1	0	N/A	unknown function
UniRef90	UHGV-0175985_13	UniRef90_A0A3A9AGI5	114.0	2.3e-28	Polymer-forming cytoskeletal protein	N/A
eggNOG-mapper	UHGV-0175985_13	768710.DesyoDRAFT_1067	122.0	3.65e-32	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N/A
Pfam	UHGV-0175985_13	PF18836	N/A	N/A	YdcK Beta solenoid repeat	B_solenoid_ydck
COG	UHGV-0175985_13	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
structural_annotation	UHGV-0175985_13	MF_01691,NF040481	N/A	N/A	N/A	N/A
PHROG	UHGV-0175985_14	phrog_434	321.2	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175985_14	UniRef90_A0A354AUE1	325.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0175985_14	428125.CLOLEP_01823	306.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-0175985_14	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0175985_14	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0175985_14	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0175985_14	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-0175985_15	K07455	293.7	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0175985_15	phrog_148	279.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175985_15	UniRef90_A0A1M6MZ92	318.0	0	Recombination protein RecT	N/A
eggNOG-mapper	UHGV-0175985_15	861450.HMPREF0080_02030	307.0	0	Recombinase, phage RecT family	N/A
Pfam	UHGV-0175985_15	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0175985_15	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0175985_15	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0175985_15	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0175985_16	phrog_15768	89.6	4.9e-26	N/A	unknown function
UniRef90	UHGV-0175985_16	UniRef90_R6RVQ1	124.0	5.23e-31	Chromosome segregation ATPases	N/A
eggNOG-mapper	UHGV-0175985_16	1121344.JHZO01000003_gene982	110.0	1.45e-26	N/A	N/A
AcrCatalog	UHGV-0175985_16	cluster_14472	100.0	4.15e-27	NA	N/A
Pfam	UHGV-0175985_16	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-0175985_16	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0175985_18	K03111	155.3	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0175985_18	phrog_44	146.0	2.29813e-43	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175985_18	UniRef90_A0A1W1VQW5	168.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0175985_18	1449126.JQKL01000046_gene2063	162.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0175985_18	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0175985_18	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0175985_18	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0175985_18	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0175985_18	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0175985_19	K01160	55.4	0.0000000000000019	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0175985_19	phrog_34	62.6	8.1e-18	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175985_19	UniRef90_C7RH80	159.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0175985_19	525919.Apre_0813	159.0	0	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0175985_19	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0175985_19	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0175985_19	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0175985_20	1235792.C808_00083	87.4	6.3e-18	Phage terminase-like protein large subunit	N/A
COG	UHGV-0175985_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
KOfam	UHGV-0175985_21	K05925	51.5	0.000000000000015	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-0175985_21	phrog_359	188.6	0	DNA methyltransferase	other
UniRef90	UHGV-0175985_21	UniRef90_UPI000E09A8FA	232.0	0	MT-A70 family methyltransferase	N/A
eggNOG-mapper	UHGV-0175985_21	1280676.AUJO01000007_gene2082	179.0	0	MT-A70	N/A
PADLOC	UHGV-0175985_21	MTase_II_00048	180.7	0	Type II methyltransferase	RM
Pfam	UHGV-0175985_21	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-0175985_21	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-0175985_21	PF05063,NF010253,COG4725	N/A	N/A	N/A	N/A
PHROG	UHGV-0175985_23	phrog_36	65.7	9.5e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0175985_23	UniRef90_E4L8B7	57.8	0.0000000558	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0175985_23	1410624.JNKK01000017_gene1964	66.2	0.00000000000582	sigma factor activity	N/A
COG	UHGV-0175985_23	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0175985_23	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0175985_24	K07451	46.5	0.00000000000067	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0175985_24	phrog_119	72.8	5.2e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0175985_24	UniRef90_G9YSB5	134.0	4.6e-38	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0175985_24	610130.Closa_0739	91.7	3.4e-22	HNH nucleases	N/A
Pfam	UHGV-0175985_24	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0175985_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0175985_25	phrog_9	294.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0175985_25	UniRef90_A0A6A8VI40	692.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0175985_25	349161.Dred_2607	670.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-0175985_25	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0175985_25	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0175985_25	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0175985_25	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0175985_26	phrog_12	118.3	5.9e-35	portal protein	head and packaging
UniRef90	UHGV-0175985_26	UniRef90_A0A328UFT7	384.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0175985_26	349161.Dred_2606	322.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0175985_26	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0175985_26	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0175985_26	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0175985_26	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0175985_27	K01358	145.2	5.80138e-43	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0175985_27	phrog_94	260.0	0	head maturation protease	head and packaging
UniRef90	UHGV-0175985_27	UniRef90_A0A1C6FFN6	317.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0175985_27	349161.Dred_2605	280.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0175985_27	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0175985_27	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0175985_27	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0175985_28	phrog_10	125.8	5.3e-37	major head protein	head and packaging
UniRef90	UHGV-0175985_28	UniRef90_UPI0018757887	560.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0175985_28	1235792.C808_00086	427.0	0	Phage capsid family	N/A
Pfam	UHGV-0175985_28	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0175985_28	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0175985_28	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0175985_28	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0175985_28	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0175985_29	phrog_749	70.1	2.8e-20	N/A	unknown function
UniRef90	UHGV-0175985_29	UniRef90_A0A7V7BBS9	73.2	0.00000000000000953	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0175985_29	349161.Dred_2603	89.4	8.38e-22	N/A	N/A
PHROG	UHGV-0175985_30	phrog_19734	107.0	1.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0175985_30	349161.Dred_2602	78.2	5.88e-17	N/A	N/A
structural_annotation	UHGV-0175985_30	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0175985_31	908340.HMPREF9406_2574	82.8	3.28e-19	N/A	N/A
structural_annotation	UHGV-0175985_31	PF05657,COG3167	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0175985_32	908340.HMPREF9406_2573	72.4	0.0000000000000989	N/A	N/A
structural_annotation	UHGV-0175985_32	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0175985_33	phrog_88	106.1	3.3e-31	major tail protein	tail
UniRef90	UHGV-0175985_33	UniRef90_G9YSC5	219.0	0	Phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0175985_33	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0175985_33	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175985_33	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0175985_34	PF11836	N/A	N/A	N/A	N/A
UniRef90	UHGV-0175985_35	UniRef90_R5TXS3	65.9	0.000000000000326	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0175985_35	887325.HMPREF0381_1083	57.0	0.000000000227	Helix-turn-helix XRE-family like proteins	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0175985	Yes	18,125	47	50	1