vOTU vOTU-097361

vOTU: vOTU-097361

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-097361
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00114 → vSUBFAM-01965 → vOTU-097361
Host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium_P → Clostridium_P perfringens
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0173997
Biosample ID	SAMN07501039
Genome length (bp)	25,353 bps
CheckV completeness	52.64% (Medium-quality)
CDS count	38
CDS density	89.84%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Clostridiales → Clostridiaceae → Clostridium_P → Clostridium_P perfringens	Total connections	61	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 52.64)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0173997_1	UniRef90_UPI000254DFF0	122.0	7.12e-34	YopX family protein	N/A
KOfam	UHGV-0173997_5	K06919	85.0	7.3e-25	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-0173997_5	phrog_6088	713.2	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173997_5	UniRef90_A0A336QQN0	1379.0	0	Phage/plasmid primase, P4 family, C-terminal domain protein	N/A
eggNOG-mapper	UHGV-0173997_5	86416.Clopa_0080	370.0	0	TIGRFAM phage plasmid primase, P4 family, C-terminal domain	N/A
Pfam	UHGV-0173997_5	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-0173997_5	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-0173997_5	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-0173997_5	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0173997_5	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0173997_5	PF08706,PF05272,PF19898,MF_00974,MF_00016,NF005477,COG3378	N/A	N/A	N/A	N/A
KOfam	UHGV-0173997_6	K22299	62.5	1e-17	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0173997_6	phrog_8	54.9	0.0000000000000024	transcriptional regulator	transcription regulation
UniRef90	UHGV-0173997_6	UniRef90_UPI001040CFB3	82.8	6.92e-18	helix-turn-helix transcriptional regulator	N/A
PADLOC	UHGV-0173997_6	retron_type_VI_hth_cluster2_1	57.8	2.2e-16	N/A	Retron
Pfam	UHGV-0173997_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0173997_8	PF20027	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_9	phrog_36	75.7	7.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0173997_9	UniRef90_A0A317TER8	269.0	0	RNA polymerase subunit sigma	N/A
eggNOG-mapper	UHGV-0173997_9	1540257.JQMW01000013_gene751	137.0	1.57e-39	sigma factor activity	N/A
Pfam	UHGV-0173997_9	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
COG	UHGV-0173997_9	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0173997_9	PF05263,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_10	phrog_16552	86.2	2.8e-25	N/A	unknown function
PHROG	UHGV-0173997_11	phrog_606	89.2	4.3e-26	terminase small subunit	head and packaging
UniRef90	UHGV-0173997_11	UniRef90_A0A072Y3A7	144.0	5.7201e-42	Phage terminase, large subunit, PBSX family	N/A
eggNOG-mapper	UHGV-0173997_11	999411.HMPREF1092_03330	179.0	0	DNA-packaging protein gp3	N/A
Pfam	UHGV-0173997_11	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
PHROG	UHGV-0173997_12	phrog_3180	50.1	0.000000000000039	Arc-like repressor	transcription regulation
UniRef90	UHGV-0173997_12	UniRef90_A0A6B4SLS7	68.2	0.0000000000000425	Ribbon-helix-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0173997_12	1121342.AUCO01000030_gene2605	58.9	0.0000000000327	Ribbon-helix-helix domain	N/A
Pfam	UHGV-0173997_12	PF12651	N/A	N/A	Ribbon-helix-helix domain	RHH_3
structural_annotation	UHGV-0173997_12	PF12651,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_13	phrog_314	88.4	1e-25	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0173997_13	UniRef90_UPI000D1F65C9	157.0	1.85952e-42	GIY-YIG nuclease family protein	N/A
eggNOG-mapper	UHGV-0173997_13	682795.AciX8_1848	75.9	0.000000000000121	GIY-YIG type nucleases (URI domain)	N/A
PADLOC	UHGV-0173997_13	HEase_00030	40.7	0.000000000068	homing endonuclease	RM
Pfam	UHGV-0173997_13	PF07460	N/A	N/A	NUMOD3 motif	NUMOD3
NCBIFam	UHGV-0173997_13	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
KOfam	UHGV-0173997_14	K06909	391.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0173997_14	phrog_3717	233.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0173997_14	UniRef90_UPI001C85024A	847.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0173997_14	999411.HMPREF1092_03328	620.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0173997_14	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0173997_14	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0173997_14	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0173997_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0173997_14	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_15	phrog_64	279.7	0	portal protein	head and packaging
UniRef90	UHGV-0173997_15	UniRef90_UPI001C8530D6	802.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0173997_15	1391647.AVSV01000022_gene2556	582.0	0	portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0173997_15	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0173997_15	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_16	phrog_115	135.7	4.5e-40	minor head protein	head and packaging
UniRef90	UHGV-0173997_16	UniRef90_A0A8H9UYI9	432.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0173997_16	999411.HMPREF1092_03325	170.0	0	head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-0173997_16	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0173997_16	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0173997_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0173997_16	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_17	phrog_1233	120.4	1.5e-35	N/A	unknown function
UniRef90	UHGV-0173997_17	UniRef90_B2TNX0	107.0	1.3e-27	N/A	N/A
eggNOG-mapper	UHGV-0173997_17	1280692.AUJL01000004_gene849	137.0	9.35002e-41	N/A	N/A
structural_annotation	UHGV-0173997_17	PF06114	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_18	phrog_774	67.0	3.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0173997_18	397290.C810_05225	77.8	1.34e-17	N/A	N/A
PHROG	UHGV-0173997_19	phrog_918	123.2	7.6e-37	N/A	unknown function
UniRef90	UHGV-0173997_19	UniRef90_UPI00096A904F	174.0	0	N/A	N/A
eggNOG-mapper	UHGV-0173997_19	1499683.CCFF01000014_gene3910	180.0	0	N/A	N/A
Pfam	UHGV-0173997_19	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0173997_19	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_20	phrog_172	86.4	5e-25	head scaffolding protein	head and packaging
UniRef90	UHGV-0173997_20	UniRef90_A0A6M1VJN9	367.0	0	N/A	N/A
eggNOG-mapper	UHGV-0173997_20	1391647.AVSV01000022_gene2560	232.0	0	N/A	N/A
Pfam	UHGV-0173997_20	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0173997_20	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_21	phrog_909	100.7	1e-29	major head protein	head and packaging
UniRef90	UHGV-0173997_21	UniRef90_A0A0E3K1C5	97.4	4.3e-24	N/A	N/A
eggNOG-mapper	UHGV-0173997_21	1391647.AVSV01000022_gene2561	174.0	0	N/A	N/A
structural_annotation	UHGV-0173997_21	PF02924	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_22	phrog_29	242.1	0	major head protein	head and packaging
UniRef90	UHGV-0173997_22	UniRef90_A0A336QVB2	628.0	0	Major capsid protein E	N/A
eggNOG-mapper	UHGV-0173997_22	1391647.AVSV01000022_gene2562	566.0	0	Phage major capsid protein E	N/A
Pfam	UHGV-0173997_22	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0173997_22	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_23	phrog_132	45.6	0.0000000000012	head-tail adaptor	connector
UniRef90	UHGV-0173997_23	UniRef90_A0A8H9R0H7	172.0	0	Phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-0173997_23	999411.HMPREF1092_03320	60.1	0.000000000343	N/A	N/A
structural_annotation	UHGV-0173997_23	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_24	phrog_3366	135.1	3.3e-40	N/A	unknown function
eggNOG-mapper	UHGV-0173997_24	1280692.AUJL01000004_gene843	149.0	1.26117e-44	N/A	N/A
Pfam	UHGV-0173997_24	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0173997_24	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_25	phrog_556	87.8	9.7e-26	minor head protein	head and packaging
UniRef90	UHGV-0173997_25	UniRef90_UPI000994513F	222.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0173997_25	536233.CLO_1570	134.0	4.22e-39	Minor capsid protein	N/A
Pfam	UHGV-0173997_25	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0173997_25	PF11114	N/A	N/A	N/A	N/A
UniRef90	UHGV-0173997_26	UniRef90_A8MHZ5	65.9	0.000000000000494	RHH_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0173997_26	350688.Clos_1887	65.9	0.0000000000000828	N/A	N/A
Pfam	UHGV-0173997_26	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0173997_26	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0173997_28	K07496	145.4	5.19882e-43	K07496; putative transposase	N/A
PHROG	UHGV-0173997_28	phrog_506	149.2	2.94273e-44	transposase	integration and excision
UniRef90	UHGV-0173997_28	UniRef90_A0A8H9UY18	835.0	0	IS200/IS605 family element transposase accessory protein TnpB	N/A
eggNOG-mapper	UHGV-0173997_28	1443122.Z958_03715	347.0	0	Putative transposase DNA-binding domain	N/A
PADLOC	UHGV-0173997_28	Type_V_V_U3	393.2	0	Cas12	CRISPR-CAS
Pfam	UHGV-0173997_28	PF01385	N/A	N/A	Probable transposase	OrfB_IS605
Pfam	UHGV-0173997_28	PF07282	N/A	N/A	Putative transposase DNA-binding domain	OrfB_Zn_ribbon
NCBIFam	UHGV-0173997_28	NF040570.1	N/A	N/A	RNA-guided endonuclease TnpB family protein	N/A
COG	UHGV-0173997_28	COG0675	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-0173997_28	PF07282,PF01385,MF_00034,NF040570,COG0675	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_29	phrog_1281	135.6	2.1e-40	N/A	unknown function
UniRef90	UHGV-0173997_29	UniRef90_UPI000DA2E86A	282.0	0	N/A	N/A
eggNOG-mapper	UHGV-0173997_29	1123263.AUKY01000111_gene1090	117.0	1.84e-31	N/A	N/A
Pfam	UHGV-0173997_29	PF13274	N/A	N/A	Antitoxin SocA-like, Panacea domain	SocA_Panacea
COG	UHGV-0173997_29	COG3600	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0173997_29	PF13274,COG3600	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_30	phrog_5763	159.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0173997_30	1211844.CBLM010000016_gene1501	75.9	0.00000000000106	N/A	N/A
structural_annotation	UHGV-0173997_30	NF011158	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_31	phrog_3266	188.5	0	tail completion	connector
UniRef90	UHGV-0173997_31	UniRef90_UPI001C86C58C	251.0	0	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0173997_31	1292035.H476_1010	231.0	0	N/A	N/A
structural_annotation	UHGV-0173997_31	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_32	phrog_3099	206.5	0	N/A	unknown function
UniRef90	UHGV-0173997_32	UniRef90_A0A3P6KYP0	166.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0173997_32	1292035.H476_1009	229.0	0	N/A	N/A
structural_annotation	UHGV-0173997_32	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_33	phrog_4450	130.4	8.5e-39	N/A	unknown function
UniRef90	UHGV-0173997_33	UniRef90_UPI0018986D97	60.1	0.00000000362	AP endonuclease	N/A
eggNOG-mapper	UHGV-0173997_33	1499683.CCFF01000017_gene2568	59.3	0.00000000121	N/A	N/A
Pfam	UHGV-0173997_33	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-0173997_33	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_34	phrog_706	180.1	0	N/A	unknown function
UniRef90	UHGV-0173997_34	UniRef90_UPI001C867059	361.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0173997_34	1292035.H476_1007	232.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0173997_34	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0173997_34	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_35	phrog_888	148.2	7.14662e-44	N/A	unknown function
UniRef90	UHGV-0173997_35	UniRef90_A0A336QTW3	438.0	0	N/A	N/A
eggNOG-mapper	UHGV-0173997_35	1410653.JHVC01000013_gene3717	275.0	0	Bacterial PH domain	N/A
Pfam	UHGV-0173997_35	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-0173997_35	PF14470	N/A	N/A	Bacterial PH domain	bPH_3
Pfam	UHGV-0173997_35	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-0173997_35	PF15947,PF14471	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_36	phrog_58	152.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0173997_36	UniRef90_UPI001ABAFBDC	1076.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0173997_36	1292035.H476_1006	684.0	0	tape measure	N/A
Pfam	UHGV-0173997_36	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0173997_36	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0173997_36	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0173997_36	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0173997_37	phrog_33	60.3	5e-17	distal tail protein Dit	tail
UniRef90	UHGV-0173997_37	UniRef90_UPI000F53D8EC	436.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0173997_37	999411.HMPREF1092_03310	215.0	0	N/A	N/A
NCBIFam	UHGV-0173997_37	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-0173997_37	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0173997_37	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0173997_38	999411.HMPREF1092_03309	48.9	0.00000154	Prophage endopeptidase tail	N/A
COG	UHGV-0173997_38	COG4926	N/A	N/A	Phage-related protein	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0173997	Yes	25,353	28	53	1