vOTU vOTU-097452

vOTU: vOTU-097452

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-097452
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00026 → vGENUS-00148 → vOTU-097452
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1431275
Biosample ID	SAMEA2338666
Genome length (bp)	31,207 bps
CheckV completeness	55.00% (Medium-quality)
CDS count	51
CDS density	91.09%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	2799	Host agreement	94.78
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 55)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1431275_1	phrog_6493	93.5	2.1e-27	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1431275_1	UniRef90_A0A3M0LTP2	89.4	2.33e-17	Phg_2220_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1431275_1	999415.HMPREF9943_01743	97.8	8.6e-21	Transcriptional regulator	N/A
COG	UHGV-1431275_1	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1431275_1	PF07106,NF040642,COG3355	N/A	N/A	N/A	N/A
UniRef90	UHGV-1431275_2	UniRef90_A0A8D9PGW1	126.0	6.82e-37	HTH psq-type domain-containing protein	N/A
structural_annotation	UHGV-1431275_2	PF05225,COG2886	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1431275_3	139870.Q6SE91_9CAUD	47.8	0.00000235	N/A	N/A
UniRef90	UHGV-1431275_5	UniRef90_A0A8D9PGN8	164.0	0	Acetyl-coA carboxylase zinc finger domain protein	N/A
UniRef90	UHGV-1431275_10	UniRef90_UPI0019572D92	73.9	0.0000000000000133	N/A	N/A
eggNOG-mapper	UHGV-1431275_10	1256908.HMPREF0373_00479	72.8	0.00000000000000629	N/A	N/A
structural_annotation	UHGV-1431275_10	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_11	phrog_38	165.0	0	terminase large subunit	head and packaging
UniRef90	UHGV-1431275_11	UniRef90_A0A8D9UIV2	663.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1431275_11	397290.C810_01390	811.0	0	chromosome segregation	N/A
COG	UHGV-1431275_11	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1431275_11	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_12	phrog_36	67.9	1.9e-19	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1431275_12	397290.C810_01391	182.0	0	N/A	N/A
structural_annotation	UHGV-1431275_12	PF02996	N/A	N/A	N/A	N/A
UniRef90	UHGV-1431275_13	UniRef90_A0A8D9UIR9	154.0	0	RimK-related lysine biosynthesis protein	N/A
PHROG	UHGV-1431275_14	phrog_64	136.9	9.99995e-41	portal protein	head and packaging
UniRef90	UHGV-1431275_14	UniRef90_A0A8D9PG58	1055.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-1431275_14	397290.C810_01397	457.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1431275_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1431275_14	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_16	phrog_544	276.5	0	major head protein	head and packaging
UniRef90	UHGV-1431275_16	UniRef90_A0A8D9PGL1	638.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-1431275_16	608534.GCWU000341_02293	331.0	0	N/A	N/A
NCBIFam	UHGV-1431275_16	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1431275_16	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-1431275_17	UniRef90_A0A8D9UIY7	172.0	0	Rho termination factor	N/A
structural_annotation	UHGV-1431275_17	PF21169	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1431275_18	397290.C810_01402	71.2	0.0000000000000249	N/A	N/A
PHROG	UHGV-1431275_19	phrog_1863	54.5	8.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-1431275_19	1232452.BAIB02000007_gene1606	63.2	0.0000000000412	N/A	N/A
PHROG	UHGV-1431275_20	phrog_1129	75.3	5.2e-22	holin	lysis
UniRef90	UHGV-1431275_20	UniRef90_A0A8D9UII9	165.0	0	Holin	N/A
eggNOG-mapper	UHGV-1431275_20	411461.DORFOR_00721	105.0	1.14e-28	N/A	N/A
Pfam	UHGV-1431275_20	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1431275_20	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1431275_21	1298920.KI911353_gene2656	61.6	0.000000000533	N/A	N/A
structural_annotation	UHGV-1431275_21	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_22	phrog_1233	76.7	3e-22	N/A	unknown function
eggNOG-mapper	UHGV-1431275_22	357809.Cphy_2967	77.0	1.05e-16	N/A	N/A
UniRef90	UHGV-1431275_23	UniRef90_UPI001BBD4500	62.4	0.00000000549	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1431275_23	476272.RUMHYD_01963	95.1	4.07e-22	N/A	N/A
structural_annotation	UHGV-1431275_24	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1431275_25	1298920.KI911353_gene2652	65.5	0.0000000000372	N/A	N/A
structural_annotation	UHGV-1431275_25	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_26	phrog_36112	68.8	5.8e-20	N/A	unknown function
UniRef90	UHGV-1431275_26	UniRef90_A0A8D9PG71	308.0	0	Tail assembly chaperone protein	N/A
eggNOG-mapper	UHGV-1431275_26	1298920.KI911353_gene2651	118.0	1.56e-31	N/A	N/A
structural_annotation	UHGV-1431275_26	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_28	phrog_28918	75.8	3.5e-22	N/A	unknown function
UniRef90	UHGV-1431275_28	UniRef90_A0A8D9PGP0	691.0	0	Minor tail protein	N/A
eggNOG-mapper	UHGV-1431275_28	1298920.KI911353_gene2649	167.0	4.81066e-42	tape measure	N/A
COG	UHGV-1431275_28	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1431275_28	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_29	phrog_1535	96.8	4.2e-30	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1431275_29	483218.BACPEC_01146	97.4	8.44e-18	domain protein	N/A
COG	UHGV-1431275_29	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
UniRef90	UHGV-1431275_31	UniRef90_UPI00174DD543	59.3	0.000000000221	CopG family transcriptional regulator	N/A
structural_annotation	UHGV-1431275_31	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_33	phrog_2657	215.6	0	transcriptional regulator	transcription regulation
UniRef90	UHGV-1431275_33	UniRef90_R7BHB1	335.0	0	Phage regulatory protein Rha family	N/A
eggNOG-mapper	UHGV-1431275_33	33035.JPJF01000043_gene993	301.0	0	N/A	N/A
Pfam	UHGV-1431275_33	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
NCBIFam	UHGV-1431275_33	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1431275_33	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1431275_33	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_36	phrog_1194	66.5	3.5e-19	N/A	unknown function
eggNOG-mapper	UHGV-1431275_36	1232453.BAIF02000058_gene1638	66.2	0.00000000000271	N/A	N/A
structural_annotation	UHGV-1431275_36	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1431275_37	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_38	phrog_6616	150.9	7.00649e-45	tail protein	tail
UniRef90	UHGV-1431275_38	UniRef90_A0A8D9PGP3	982.0	0	Minor structural protein	N/A
eggNOG-mapper	UHGV-1431275_38	1294142.CINTURNW_1706	297.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1431275_38	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-1431275_38	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1431275_38	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
KOfam	UHGV-1431275_40	K07273	117.1	2e-34	acm; lysozyme	N/A
PHROG	UHGV-1431275_40	phrog_3393	86.4	1.6e-25	endolysin	lysis
UniRef90	UHGV-1431275_40	UniRef90_UPI001D04C319	199.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1431275_40	1235800.C819_00458	213.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-1431275_40	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1431275_40	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1431275_40	PF01183,NF003627,COG3757,COG5492	N/A	N/A	N/A	N/A
KOfam	UHGV-1431275_41	K18830	61.9	1.3e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1431275_41	phrog_8	54.8	0.0000000000000019	transcriptional regulator	transcription regulation
UniRef90	UHGV-1431275_41	UniRef90_R7BIH5	131.0	3.96e-37	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1431275_41	97138.C820_01960	116.0	4.85e-32	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-1431275_41	retron_type_VI_hth_cluster2_1	41.7	0.000000000023	N/A	Retron
Pfam	UHGV-1431275_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1431275_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1431275_41	PF01381,MF_00535,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1431275_42	phrog_32192	76.1	3.8e-22	N/A	unknown function
UniRef90	UHGV-1431275_42	UniRef90_UPI001D0221FF	141.0	4.39994e-41	alanine-zipper protein	N/A
KOfam	UHGV-1431275_44	K07741	61.4	3.1e-17	antB; anti-repressor protein	N/A
PHROG	UHGV-1431275_44	phrog_373	97.1	2.3e-28	anti-repressor	transcription regulation
UniRef90	UHGV-1431275_44	UniRef90_R7BII5	399.0	0	AntA domain-containing protein	N/A
eggNOG-mapper	UHGV-1431275_44	397290.C810_01343	179.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1431275_44	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
COG	UHGV-1431275_44	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1431275_44	PF08346,TIGR02681,COG3561	N/A	N/A	N/A	N/A
COG	UHGV-1431275_50	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1431275_50	PF10552	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1431275	Yes	31,207	36	55	1
UHGV-0053902	No	31,207	36	55	1