vOTU vOTU-097608

vOTU: vOTU-097608

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-097608
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-01783 → vGENUS-06509 → vOTU-097608
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0010354
Biosample ID	SAMEA4765862
Genome length (bp)	22,331 bps
CheckV completeness	62.88% (Medium-quality)
CDS count	43
CDS density	90.20%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	44	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → CAG-510 → CAG-510 sp000434615	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.88)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0010354_1	phrog_10	119.4	3.2e-35	major head protein	head and packaging
UniRef90	UHGV-0010354_1	UniRef90_UPI001D075B31	642.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0010354_1	349161.Dred_2604	378.0	0	Phage capsid family	N/A
Pfam	UHGV-0010354_1	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0010354_1	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0010354_1	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0010354_1	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0010354_2	K01358	127.9	1.1e-37	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0010354_2	phrog_94	214.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0010354_2	UniRef90_A0A3A9EY08	351.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0010354_2	1235792.C808_00085	262.0	0	Clp protease	N/A
Pfam	UHGV-0010354_2	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0010354_2	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0010354_2	PF00574,MF_00444,NF009203,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0010354_3	phrog_12	109.6	2e-32	portal protein	head and packaging
UniRef90	UHGV-0010354_3	UniRef90_UPI001C0B5E3A	613.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0010354_3	1211817.CCAT010000053_gene2130	306.0	0	Phage portal protein	N/A
Pfam	UHGV-0010354_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0010354_3	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0010354_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0010354_3	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0010354_4	phrog_9	288.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0010354_4	UniRef90_UPI001D05EE8F	906.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-0010354_4	1211817.CCAT010000053_gene2129	546.0	0	Phage Terminase	N/A
Pfam	UHGV-0010354_4	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0010354_4	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0010354_4	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0010354_4	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0010354_5	phrog_5110	112.8	1.2e-33	terminase small subunit	head and packaging
UniRef90	UHGV-0010354_5	UniRef90_UPI001D06BD2A	184.0	0	P27 family phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0010354_5	349161.Dred_2608	122.0	1.02e-34	N/A	N/A
Pfam	UHGV-0010354_5	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0010354_5	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0010354_6	K07451	41.9	0.000000000017	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0010354_6	phrog_119	65.8	5.9e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010354_6	UniRef90_UPI001D07BB57	209.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0010354_6	768710.DesyoDRAFT_1275	103.0	1.26e-26	HNH nucleases	N/A
Pfam	UHGV-0010354_6	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0010354_6	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
KOfam	UHGV-0010354_7	K03111	126.7	2.8e-37	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0010354_7	phrog_44	125.3	4.7e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010354_7	UniRef90_A0A3A9F3L6	229.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0010354_7	1280682.AUKA01000019_gene1126	187.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0010354_7	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0010354_7	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0010354_7	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0010354_7	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0010354_7	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0010354_9	phrog_25385	48.3	0.00000000000016	N/A	unknown function
eggNOG-mapper	UHGV-0010354_9	411468.CLOSCI_00565	62.8	0.0000000000435	N/A	N/A
KOfam	UHGV-0010354_12	K03497	52.5	0.00000000000001	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0010354_12	phrog_15982	143.3	1.60028e-42	N/A	unknown function
UniRef90	UHGV-0010354_12	UniRef90_UPI001D07CD5B	421.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0010354_12	411902.CLOBOL_03889	277.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0010354_12	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0010354_12	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0010354_12	PF02195,PF07506,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0010354_13	K03496	179.4	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0010354_13	phrog_164	154.4	1.4013e-45	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0010354_13	UniRef90_UPI001C0C6936	283.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0010354_13	642492.Clole_0729	209.0	0	AAA domain	N/A
Pfam	UHGV-0010354_13	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0010354_13	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0010354_13	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
PHROG	UHGV-0010354_14	phrog_824	144.9	1.90577e-43	N/A	unknown function
UniRef90	UHGV-0010354_14	UniRef90_R7R192	302.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0010354_14	397288.C806_00096	157.0	0	VRR_NUC	N/A
Pfam	UHGV-0010354_14	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0010354_14	PF08774	N/A	N/A	N/A	N/A
UniRef90	UHGV-0010354_18	UniRef90_R7R195	172.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0010354_20	1341157.RF007C_04375	83.2	6.34e-19	N/A	N/A
PHROG	UHGV-0010354_21	phrog_3584	176.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0010354_21	1232452.BAIB02000007_gene1647	326.0	0	N/A	N/A
structural_annotation	UHGV-0010354_21	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-0010354_23	K07319	63.4	3.8e-18	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0010354_23	phrog_67	66.5	5.1e-19	DNA methyltransferase	other
UniRef90	UHGV-0010354_23	UniRef90_A0A1Y3WPV3	119.0	2.4e-32	DNA modification methylase (Fragment)	N/A
eggNOG-mapper	UHGV-0010354_23	97139.C824_00741	116.0	4.57e-31	DNA methylase	N/A
PADLOC	UHGV-0010354_23	MTase_II_00172	66.8	7.2e-19	Type II methyltransferase	RM
Pfam	UHGV-0010354_23	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0010354_23	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0010354_23	PF01170	N/A	N/A	N/A	N/A
PHROG	UHGV-0010354_24	phrog_23224	44.4	0.0000000000014	DNA methyltransferase	other
UniRef90	UHGV-0010354_24	UniRef90_J9CYX8	125.0	1.05e-35	DNA modification methylase	N/A
eggNOG-mapper	UHGV-0010354_24	97139.C824_00741	121.0	2.13e-33	DNA methylase	N/A
PADLOC	UHGV-0010354_24	MTase_II_00157	42.6	0.000000000017	Type II methyltransferase	RM
COG	UHGV-0010354_24	COG0863	N/A	N/A	DNA modification methylase	N/A
PHROG	UHGV-0010354_25	phrog_24368	63.2	4.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-0010354_25	411902.CLOBOL_03886	67.8	0.00000000000102	N/A	N/A
PHROG	UHGV-0010354_26	phrog_24386	111.0	1e-32	N/A	unknown function
eggNOG-mapper	UHGV-0010354_26	622312.ROSEINA2194_03445	125.0	2.09e-35	phosphatase activity	N/A
COG	UHGV-0010354_26	COG0561	N/A	N/A	Hydroxymethylpyrimidine pyrophosphatase and other HAD family phosphatases	N/A
KOfam	UHGV-0010354_28	K03111	58.4	1.3e-16	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0010354_28	phrog_26861	94.9	5.8e-28	N/A	unknown function
UniRef90	UHGV-0010354_28	UniRef90_A0A174WND2	191.0	0	Helix-destabilizing protein	N/A
eggNOG-mapper	UHGV-0010354_28	411462.DORLON_01832	94.4	6.88e-21	Single-strand binding protein family	N/A
Pfam	UHGV-0010354_28	PF00436	N/A	N/A	Single-strand binding protein family	SSB
COG	UHGV-0010354_28	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0010354_28	PF00436,PF13567,MF_00984,NF004476,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0010354_30	phrog_20014	81.5	7.1e-24	N/A	unknown function
eggNOG-mapper	UHGV-0010354_30	411470.RUMGNA_02042	83.6	1.12e-19	N/A	N/A
KOfam	UHGV-0010354_31	K00558	171.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0010354_31	phrog_116	190.0	0	DNA methyltransferase	other
UniRef90	UHGV-0010354_31	UniRef90_R6SIH7	551.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0010354_31	397290.C810_00394	540.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0010354_31	MTase_II_00058	143.3	9.94922e-44	Type II methyltransferase	RM
Pfam	UHGV-0010354_31	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0010354_31	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0010354_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0010354_31	PF00145,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0010354_32	phrog_6058	68.9	4.4e-20	N/A	unknown function
UniRef90	UHGV-0010354_32	UniRef90_A0A0U9H7T0	77.8	1.97e-17	Modification methylase SinI	N/A
eggNOG-mapper	UHGV-0010354_32	411468.CLOSCI_01465	90.1	4.87e-23	N/A	N/A
structural_annotation	UHGV-0010354_32	PF12728,TIGR01764	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0010354_35	397290.C810_00391	148.0	2.38221e-44	N/A	N/A
structural_annotation	UHGV-0010354_35	PF16090	N/A	N/A	N/A	N/A
UniRef90	UHGV-0010354_39	UniRef90_C7G6N8	105.0	2.55e-28	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0010354_39	1226325.HMPREF1548_00560	66.6	0.000000000000196	N/A	N/A
Pfam	UHGV-0010354_39	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0010354_39	PF01381,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0010354_40	K22300	68.1	1.8e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0010354_40	phrog_8	61.5	2e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0010354_40	UniRef90_UPI001B3918A3	122.0	3.19e-33	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0010354_40	658086.HMPREF0994_04276	98.2	7.39e-25	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0010354_40	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0010354_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0010354_40	PF12844,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0010354_41	UniRef90_A0A6J6I5H7	50.1	0.000000661	Unannotated protein	N/A
eggNOG-mapper	UHGV-0010354_41	483216.BACEGG_01163	50.4	0.0000000697	N/A	N/A
KOfam	UHGV-0010354_42	K14059	126.3	4e-37	int; integrase	N/A
PHROG	UHGV-0010354_42	phrog_1	159.5	0	integrase	integration and excision
UniRef90	UHGV-0010354_42	UniRef90_UPI001C0C539C	608.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0010354_42	931626.Awo_c31360	325.0	0	Phage integrase family	N/A
Pfam	UHGV-0010354_42	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0010354_42	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0010354_42	PF00589,MF_01808,NF002331,COG4973	N/A	N/A	N/A	N/A
UniRef90	UHGV-0010354_43	UniRef90_A0A354I8R6	271.0	0	GGGtGRT protein (Fragment)	N/A
eggNOG-mapper	UHGV-0010354_43	1226325.HMPREF1548_03227	277.0	0	GGGtGRT protein	N/A
Pfam	UHGV-0010354_43	PF14057	N/A	N/A	GGGtGRT protein	GGGtGRT
structural_annotation	UHGV-0010354_43	PF14057	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0010354	Yes	22,331	45	63	1