vOTU vOTU-097740

vOTU: vOTU-097740

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-097740
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00007 → vSUBFAM-00048 → vGENUS-00024 → vOTU-097740
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0210247
Biosample ID	SAMN10080928
Genome length (bp)	30,544 bps
CheckV completeness	51.77% (Medium-quality)
CDS count	50
CDS density	79.03%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Agathobacter → Agathobacter rectalis	Total connections	3612	Host agreement	90.42
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 51.77)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0210247_1	phrog_314	86.8	2.3e-25	homing endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210247_1	UniRef90_A0A173UI60	402.0	0	Group I intron endonuclease	N/A
eggNOG-mapper	UHGV-0210247_1	1380384.JADN01000003_gene632	94.0	3.62e-20	Intron encoded nuclease repeat motif	N/A
Pfam	UHGV-0210247_1	PF01541	N/A	N/A	GIY-YIG catalytic domain	GIY-YIG
Pfam	UHGV-0210247_1	PF07453	N/A	N/A	NUMOD1 domain	NUMOD1
NCBIFam	UHGV-0210247_1	TIGR01453.1	N/A	N/A	group I intron endonuclease	N/A
structural_annotation	UHGV-0210247_1	PF07453,PF19835,PF04936,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_2	phrog_1535	65.5	1.8e-20	tail length tape measure protein	tail
UniRef90	UHGV-0210247_2	UniRef90_A0A173UI54	262.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0210247_2	1408437.JNJN01000010_gene1238	159.0	1.91e-40	domain protein	N/A
COG	UHGV-0210247_2	COG1511	N/A	N/A	N/A	N/A
KOfam	UHGV-0210247_3	K07273	156.5	0	acm; lysozyme	N/A
PHROG	UHGV-0210247_3	phrog_291	129.1	4e-38	endolysin	lysis
UniRef90	UHGV-0210247_3	UniRef90_A0A174GRH8	573.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0210247_3	1235800.C819_00458	223.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0210247_3	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0210247_3	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0210247_3	PF01183,PF01471,MF_01672,COG3757,COG3409	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210247_6	UniRef90_R7BGF5	91.3	3.15e-20	Phage tail protein	N/A
structural_annotation	UHGV-0210247_6	PF16463,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210247_7	PF05657	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210247_8	1232453.BAIF02000058_gene1631	115.0	4.53e-30	N/A	N/A
AcrCatalog	UHGV-0210247_8	cluster_24841	145.0	0	NA	N/A
eggNOG-mapper	UHGV-0210247_9	1298920.KI911353_gene2656	60.5	0.0000000011	N/A	N/A
structural_annotation	UHGV-0210247_9	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_10	phrog_1129	75.3	4.9e-22	holin	lysis
UniRef90	UHGV-0210247_10	UniRef90_A0A412RR82	168.0	0	Enolase	N/A
eggNOG-mapper	UHGV-0210247_10	411461.DORFOR_00721	87.8	1.14e-21	N/A	N/A
Pfam	UHGV-0210247_10	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0210247_10	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_11	phrog_4105	75.9	3.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0210247_11	411459.RUMOBE_00911	143.0	4.55422e-43	N/A	N/A
eggNOG-mapper	UHGV-0210247_12	397290.C810_01402	61.2	0.000000000195	N/A	N/A
structural_annotation	UHGV-0210247_13	PF21169	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_14	phrog_29	149.9	1.96182e-44	major head protein	head and packaging
UniRef90	UHGV-0210247_14	UniRef90_A0A412RQU1	649.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0210247_14	1296659.S5MNB6_9CAUD	167.0	1.4013e-45	Phage major capsid protein E	N/A
Pfam	UHGV-0210247_14	PF03864	N/A	N/A	Phage major capsid protein E	Phage_cap_E
structural_annotation	UHGV-0210247_14	PF03864,MF_04133,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_15	phrog_909	77.6	1.2e-22	major head protein	head and packaging
UniRef90	UHGV-0210247_15	UniRef90_R7BGI8	192.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0210247_15	1078085.HMPREF1210_01145	60.1	0.000000000382	N/A	N/A
UniRef90	UHGV-0210247_16	UniRef90_UPI000E41BB01	55.8	0.00000232	N/A	N/A
PHROG	UHGV-0210247_17	phrog_2662	58.0	1e-16	portal protein	head and packaging
UniRef90	UHGV-0210247_17	UniRef90_A0A412RR50	394.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0210247_17	1176423.I6R1H0_9VIRU	54.7	0.00000278	Phage Mu protein F like protein	N/A
Pfam	UHGV-0210247_17	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
structural_annotation	UHGV-0210247_17	PF04233,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_18	phrog_64	150.1	1.12104e-44	portal protein	head and packaging
UniRef90	UHGV-0210247_18	UniRef90_A0A412RQZ0	914.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0210247_18	1232453.BAIF02000058_gene1625	330.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0210247_18	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0210247_18	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_19	phrog_36	57.6	2.6e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0210247_19	397290.C810_01391	168.0	0	N/A	N/A
structural_annotation	UHGV-0210247_19	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_20	phrog_38	141.8	4.19969e-42	terminase large subunit	head and packaging
UniRef90	UHGV-0210247_20	UniRef90_A0A318EQM2	352.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0210247_20	1123263.AUKY01000015_gene1608	353.0	0	chromosome segregation	N/A
COG	UHGV-0210247_20	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210247_20	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_23	phrog_25639	55.9	5.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-0210247_23	483218.BACPEC_01160	58.2	0.00000000026	N/A	N/A
PHROG	UHGV-0210247_24	phrog_872	104.6	9.2e-31	N/A	unknown function
UniRef90	UHGV-0210247_24	UniRef90_UPI001EE041E7	132.0	1.74e-38	N/A	N/A
eggNOG-mapper	UHGV-0210247_24	688245.CtCNB1_2652	101.0	2.23e-26	N/A	N/A
Pfam	UHGV-0210247_24	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-0210247_24	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-0210247_24	PF11195	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210247_30	UniRef90_A0A8D9PGW1	62.0	0.0000000000222	HTH psq-type domain-containing protein	N/A
Pfam	UHGV-0210247_30	PF05225	N/A	N/A	helix-turn-helix, Psq domain	HTH_psq
structural_annotation	UHGV-0210247_30	PF05225,COG2886	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_31	phrog_4707	72.6	4.5e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0210247_31	1122172.KB890259_gene1441	119.0	1.41e-28	N/A	N/A
Pfam	UHGV-0210247_31	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0210247_31	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0210247_31	NF040939,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_33	phrog_236	48.3	0.00000000000022	nucleotide kinase	other
UniRef90	UHGV-0210247_33	UniRef90_A0A412RQV8	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210247_33	1200557.JHWV01000001_gene285	63.5	0.000000000415	N/A	N/A
Pfam	UHGV-0210247_33	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0210247_33	PF11753	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210247_34	UniRef90_A0A8D9UIS5	105.0	1.46e-24	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0210247_34	658655.HMPREF0988_00895	130.0	3.06e-36	N/A	N/A
structural_annotation	UHGV-0210247_34	PF16677	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210247_35	411470.RUMGNA_03786	79.0	3.44e-17	Helix-turn-helix XRE-family like proteins	N/A
COG	UHGV-0210247_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0210247_42	phrog_1233	44.0	0.0000000000034	N/A	unknown function
eggNOG-mapper	UHGV-0210247_42	658655.HMPREF0988_00914	86.3	1.66e-20	N/A	N/A
eggNOG-mapper	UHGV-0210247_43	658655.HMPREF0988_00915	118.0	3.79e-30	N/A	N/A
PHROG	UHGV-0210247_44	phrog_20016	217.2	0	N/A	unknown function
UniRef90	UHGV-0210247_44	UniRef90_A0A285PT46	153.0	2.8026e-45	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0210247_44	397290.C810_05214	221.0	0	N/A	N/A
structural_annotation	UHGV-0210247_44	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_45	phrog_16490	162.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0210247_45	397290.C810_01328	177.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210247_46	658655.HMPREF0988_00918	72.8	3.09e-16	N/A	N/A
eggNOG-mapper	UHGV-0210247_47	658655.HMPREF0988_00919	95.9	6.38e-23	N/A	N/A
KOfam	UHGV-0210247_49	K14059	260.0	0	int; integrase	N/A
PHROG	UHGV-0210247_49	phrog_1	215.0	0	integrase	integration and excision
UniRef90	UHGV-0210247_49	UniRef90_A0A412RQS9	742.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0210247_49	1235799.C818_02711	373.0	0	Phage integrase family	N/A
Pfam	UHGV-0210247_49	PF02920	N/A	N/A	DNA binding domain of tn916 integrase	Integrase_DNA
Pfam	UHGV-0210247_49	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0210247_49	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0210247_49	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0210247_49	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0210247_50	phrog_16129	58.9	2.6e-17	excisionase	integration and excision
UniRef90	UHGV-0210247_50	UniRef90_A0A412RR26	235.0	0	HTH luxR-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0210247_50	411489.CLOL250_01459	89.0	1.42e-21	Excisionase from transposon Tn916	N/A
Pfam	UHGV-0210247_50	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
Pfam	UHGV-0210247_50	PF09035	N/A	N/A	Excisionase from transposon Tn916	Tn916-Xis
NCBIFam	UHGV-0210247_50	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
structural_annotation	UHGV-0210247_50	PF09035,PF00196,MF_00674,NF033787,NF008895,COG2771	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0210247	Yes	30,544	39	52	1