vOTU vOTU-097863

vOTU: vOTU-097863

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-097863
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00132 → vSUBFAM-05759 → vOTU-097863
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Bulleidia → Bulleidia sp905194705
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0017463
Biosample ID	SAMEA4766126
Genome length (bp)	34,148 bps
CheckV completeness	79.30% (Medium-quality)
CDS count	54
CDS density	89.14%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Bulleidia → Bulleidia sp905194705	Total connections	15	Host agreement	86.67
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Bulleidia → Bulleidia sp905194705	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 79.3)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0017463_1	K14059	129.7	4e-38	int; integrase	N/A
PHROG	UHGV-0017463_1	phrog_1	141.0	1.10002e-41	integrase	integration and excision
UniRef90	UHGV-0017463_1	UniRef90_UPI00189AE8E1	192.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0017463_1	469596.HMPREF9488_02322	85.1	0.00000000000000243	Phage integrase family	N/A
Pfam	UHGV-0017463_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0017463_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0017463_1	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_2	phrog_9605	375.9	0	N/A	unknown function
UniRef90	UHGV-0017463_2	UniRef90_I0SCN5	468.0	0	PF12358 family protein	N/A
eggNOG-mapper	UHGV-0017463_2	862971.SANR_1133	468.0	0	N/A	N/A
Pfam	UHGV-0017463_2	PF12358	N/A	N/A	N/A	DUF3644
Pfam	UHGV-0017463_2	PF18740	N/A	N/A	EC042_2821-like Restriction Endonuclease-like domain	EC042_2821
structural_annotation	UHGV-0017463_2	PF12358,COG1895	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017463_3	UniRef90_A0A844FW05	136.0	2.28e-40	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0017463_3	1280698.AUJS01000084_gene2429	51.2	0.00000124	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0017463_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0017463_3	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0017463_3	PF13560,NF041677,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0017463_4	K22300	62.0	1.3e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0017463_4	phrog_8	69.2	8.5e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0017463_4	UniRef90_UPI0005E915F7	86.7	1.95e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0017463_4	1504823.CCMM01000010_gene1370	89.4	9.91e-21	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0017463_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0017463_4	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0017463_4	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0017463_5	UniRef90_U2W5C2	65.1	0.00000000000203	Toxin-antitoxin system, antitoxin component, Xre family	N/A
eggNOG-mapper	UHGV-0017463_5	1321782.HMPREF1986_00318	65.1	0.000000000000341	N/A	N/A
structural_annotation	UHGV-0017463_5	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
Pfam	UHGV-0017463_8	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0017463_8	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
eggNOG-mapper	UHGV-0017463_9	1120978.KB894087_gene426	71.6	0.0000000000000418	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-0017463_9	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
PHROG	UHGV-0017463_11	phrog_434	289.2	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017463_11	UniRef90_UPI0003F5EC8F	283.0	0	YqaJ viral recombinase family protein	N/A
eggNOG-mapper	UHGV-0017463_11	1123263.AUKY01000072_gene2104	283.0	0	YqaJ-like viral recombinase domain	N/A
Pfam	UHGV-0017463_11	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-0017463_11	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-0017463_11	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-0017463_11	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_13	phrog_750	50.2	0.000000000000038	N/A	unknown function
structural_annotation	UHGV-0017463_13	PF13835,NF040858	N/A	N/A	N/A	N/A
KOfam	UHGV-0017463_14	K07455	191.3	0	recT; recombination protein RecT	N/A
PHROG	UHGV-0017463_14	phrog_148	208.1	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017463_14	UniRef90_A0A7V8A6Q1	266.0	0	Recombinase phage RecT family	N/A
eggNOG-mapper	UHGV-0017463_14	428127.EUBDOL_01509	242.0	0	RecT family	N/A
Pfam	UHGV-0017463_14	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-0017463_14	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-0017463_14	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-0017463_14	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_15	phrog_1770	74.4	1.6e-21	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0017463_15	536233.CLO_1822	190.0	0	N/A	N/A
structural_annotation	UHGV-0017463_15	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_16	phrog_5810	68.6	7.6e-20	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017463_16	UniRef90_A0A417QFV0	159.0	6.44597e-44	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0017463_16	1094508.Tsac_2440	111.0	8.14e-26	N/A	N/A
structural_annotation	UHGV-0017463_16	PF10771,NF041413,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0017463_18	K00558	134.0	9.6e-40	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0017463_18	phrog_116	142.4	2.10055e-42	DNA methyltransferase	other
UniRef90	UHGV-0017463_18	UniRef90_UPI001BC3B448	317.0	0	DNA (Cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0017463_18	397290.C810_05213	294.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0017463_18	MTase_II_00058	128.2	1.3e-37	Type II methyltransferase	RM
Pfam	UHGV-0017463_18	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0017463_18	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0017463_18	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0017463_18	PF00145,MF_00812,TIGR00675,COG0270	N/A	N/A	N/A	N/A
COG	UHGV-0017463_19	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0017463_20	K00558	40.5	0.000000000025	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0017463_20	phrog_17284	67.4	9.9e-20	N/A	unknown function
UniRef90	UHGV-0017463_20	UniRef90_A0A350S1S8	85.1	1.34e-18	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0017463_20	996306.SSUR61_1005	86.3	3.07e-18	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0017463_20	MTase_II_00147	54.3	0.0000000000000033	Type II methyltransferase	RM
Pfam	UHGV-0017463_20	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0017463_20	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0017463_21	phrog_22292	45.2	0.0000000000013	N/A	unknown function
PHROG	UHGV-0017463_22	phrog_478	121.5	3.4e-36	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-0017463_22	UniRef90_R6R5K5	135.0	3.37e-38	Protein 64 protein	N/A
eggNOG-mapper	UHGV-0017463_22	1111121.HMPREF1247_0834	174.0	0	N/A	N/A
PHROG	UHGV-0017463_26	phrog_236	101.5	1.4e-29	nucleotide kinase	other
UniRef90	UHGV-0017463_26	UniRef90_UPI000AC4FB2A	100.0	3.08e-26	N/A	N/A
eggNOG-mapper	UHGV-0017463_26	673376.F2VHW0_9CAUD	94.0	6.83e-24	N/A	N/A
Pfam	UHGV-0017463_26	PF11753	N/A	N/A	N/A	DUF3310
KOfam	UHGV-0017463_28	K03111	94.0	2.7e-27	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0017463_28	phrog_44	95.0	9.7e-28	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017463_28	UniRef90_UPI001431667E	98.2	3.97e-23	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0017463_28	1123263.AUKY01000012_gene1978	87.4	3.21e-20	Single-strand binding protein family	N/A
Pfam	UHGV-0017463_28	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0017463_28	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0017463_28	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0017463_28	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0017463_28	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_30	phrog_4085	57.8	1.7e-16	N/A	unknown function
UniRef90	UHGV-0017463_30	UniRef90_A0A1Y4MY29	89.7	4.29e-22	Antitoxin	N/A
eggNOG-mapper	UHGV-0017463_30	1280688.AUJB01000011_gene2234	89.0	1.62e-22	N/A	N/A
Pfam	UHGV-0017463_30	PF19807	N/A	N/A	N/A	DUF6290
PHROG	UHGV-0017463_31	phrog_940	367.0	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0017463_31	UniRef90_UPI0009327623	454.0	0	N/A	N/A
eggNOG-mapper	UHGV-0017463_31	1232449.BAHV02000018_gene1534	321.0	0	N/A	N/A
PADLOC	UHGV-0017463_31	MTase_II_00015	136.9	1.90001e-40	Type II methyltransferase	RM
Pfam	UHGV-0017463_31	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0017463_31	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0017463_31	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0017463_31	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_33	phrog_9479	137.3	8.10007e-41	N/A	unknown function
eggNOG-mapper	UHGV-0017463_33	1514668.JOOA01000002_gene2680	65.9	0.00000000000574	N/A	N/A
structural_annotation	UHGV-0017463_33	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_34	phrog_2412	64.1	2.1e-18	N/A	unknown function
UniRef90	UHGV-0017463_34	UniRef90_UPI000DE85101	54.3	0.00000298	stress-induced protein	N/A
eggNOG-mapper	UHGV-0017463_34	1232449.BAHV02000018_gene1532	70.1	0.000000000000667	N/A	N/A
KOfam	UHGV-0017463_35	K06909	211.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0017463_35	phrog_2	101.8	1e-29	terminase large subunit	head and packaging
UniRef90	UHGV-0017463_35	UniRef90_UPI0018988012	627.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0017463_35	428127.EUBDOL_01229	521.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0017463_35	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0017463_35	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0017463_35	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0017463_35	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0017463_35	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_36	phrog_533	291.0	0	portal protein	head and packaging
UniRef90	UHGV-0017463_36	UniRef90_UPI001F061150	445.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0017463_36	428127.EUBDOL_01228	372.0	0	phage minor capsid protein	N/A
Pfam	UHGV-0017463_36	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0017463_36	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_37	phrog_581	219.2	0	minor head protein	head and packaging
UniRef90	UHGV-0017463_37	UniRef90_R5XZV2	273.0	0	Protein gp4	N/A
eggNOG-mapper	UHGV-0017463_37	1125725.HMPREF1325_1324	142.0	4.48e-35	Phage minor capsid protein 2	N/A
Pfam	UHGV-0017463_37	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0017463_37	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0017463_37	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_40	phrog_194	50.9	0.0000000000000048	head scaffolding protein	head and packaging
UniRef90	UHGV-0017463_40	UniRef90_UPI00123C1ABB	67.8	0.0000000000378	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0017463_40	365659.smi_0451	55.8	0.000000275	Phage minor structural protein GP20	N/A
Pfam	UHGV-0017463_40	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0017463_41	phrog_283	245.8	0	major head protein	head and packaging
UniRef90	UHGV-0017463_41	UniRef90_UPI001896DBE2	394.0	0	P22 coat protein	N/A
eggNOG-mapper	UHGV-0017463_41	428127.EUBDOL_01223	391.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-0017463_41	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-0017463_41	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_42	phrog_541	75.9	4.4e-22	head-tail adaptor	connector
eggNOG-mapper	UHGV-0017463_42	1449050.JNLE01000003_gene3888	79.0	3.56e-17	N/A	N/A
structural_annotation	UHGV-0017463_43	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_44	phrog_556	92.0	3.4e-27	minor head protein	head and packaging
UniRef90	UHGV-0017463_44	UniRef90_UPI000691B8FF	113.0	3.6e-29	minor capsid protein	N/A
eggNOG-mapper	UHGV-0017463_44	1449050.JNLE01000003_gene3886	113.0	6.04e-30	N/A	N/A
Pfam	UHGV-0017463_44	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0017463_44	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_45	phrog_3266	51.7	0.000000000000012	tail completion	connector
eggNOG-mapper	UHGV-0017463_45	1449050.JNLE01000003_gene3885	75.5	0.00000000000000179	N/A	N/A
structural_annotation	UHGV-0017463_45	PF20765	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_46	phrog_3099	133.4	1.3e-39	N/A	unknown function
eggNOG-mapper	UHGV-0017463_46	1304866.K413DRAFT_3043	168.0	0	N/A	N/A
structural_annotation	UHGV-0017463_46	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_47	phrog_11299	86.9	2.3e-25	N/A	unknown function
structural_annotation	UHGV-0017463_47	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_48	phrog_706	135.8	2.69999e-40	N/A	unknown function
UniRef90	UHGV-0017463_48	UniRef90_UPI00051C36A4	197.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0017463_48	1449050.JNLE01000003_gene3882	196.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0017463_48	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0017463_48	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_49	phrog_1535	119.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0017463_49	UniRef90_A0A1C6CG40	167.0	3.4e-39	Phage-related protein	N/A
eggNOG-mapper	UHGV-0017463_49	1120746.CCNL01000014_gene2105	168.0	4.42999e-40	tape measure	N/A
COG	UHGV-0017463_49	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_50	phrog_1194	60.8	2e-17	N/A	unknown function
eggNOG-mapper	UHGV-0017463_50	411902.CLOBOL_00125	125.0	3.34e-35	N/A	N/A
structural_annotation	UHGV-0017463_50	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_51	phrog_13879	186.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0017463_51	411902.CLOBOL_00124	578.0	0	N/A	N/A
structural_annotation	UHGV-0017463_51	PF14594,PF21114,MF_00813,NF033848,TIGR02961,COG4379,COG4266	N/A	N/A	N/A	N/A
PHROG	UHGV-0017463_52	phrog_18725	56.7	4.4e-16	N/A	unknown function
eggNOG-mapper	UHGV-0017463_52	411902.CLOBOL_00123	151.0	2.8026e-45	N/A	N/A
eggNOG-mapper	UHGV-0017463_53	1304866.K413DRAFT_0769	72.4	0.000000000000106	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0017463	Yes	34,148	33	79	1