vOTU vOTU-098210

vOTU: vOTU-098210

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-098210
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00099 → vOTU-098210
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Faecalimonas → Faecalimonas umbilicata
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0098366
Biosample ID	SAMEA3541487
Genome length (bp)	26,452 bps
CheckV completeness	59.72% (Medium-quality)
CDS count	44
CDS density	82.44%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Faecalimonas → Faecalimonas umbilicata	Total connections	51	Host agreement	88.24
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Faecalimonas → Faecalimonas umbilicata	Total connections	40	Host agreement	97.5

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 59.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0098366_2	UniRef90_UPI00055B516D	87.4	2.44e-16	HNH endonuclease	N/A
COG	UHGV-0098366_2	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
UniRef90	UHGV-0098366_5	UniRef90_F0YZ95	70.5	0.000000000000335	Carbamate kinase	N/A
eggNOG-mapper	UHGV-0098366_5	658088.HMPREF0987_01720	183.0	0	N/A	N/A
KOfam	UHGV-0098366_6	K18830	46.4	0.000000000001	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0098366_6	phrog_8	63.8	4.4e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0098366_6	UniRef90_E9RWT1	131.0	9.9e-39	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0098366_6	411468.CLOSCI_00009	102.0	9.13e-28	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0098366_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0098366_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0098366_6	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0098366_7	K14195	43.4	0.0000000000028	sasG; surface protein G	N/A
UniRef90	UHGV-0098366_7	UniRef90_F3AMP5	454.0	0	GRAM_POS_ANCHORING domain-containing protein	N/A
NCBIFam	UHGV-0098366_7	TIGR01167.1	N/A	N/A	LPXTG cell wall anchor domain-containing protein	N/A
KOfam	UHGV-0098366_8	K03339	365.4	0	iolJ; 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase [EC:4.1.2.29]	N/A
PHROG	UHGV-0098366_8	phrog_32062	150.9	8.40779e-45	N/A	unknown function
UniRef90	UHGV-0098366_8	UniRef90_F3BBG4	530.0	0	Fructose-1,6-bisphosphate aldolase, class II	N/A
eggNOG-mapper	UHGV-0098366_8	658088.HMPREF0987_01718	574.0	0	Fructose-bisphosphate aldolase class-II	N/A
Pfam	UHGV-0098366_8	PF01116	N/A	N/A	Fructose-bisphosphate aldolase class-II	F_bP_aldolase
NCBIFam	UHGV-0098366_8	TIGR01859.1	N/A	N/A	class II fructose-1,6-bisphosphate aldolase	N/A
COG	UHGV-0098366_8	COG0191	N/A	N/A	Fructose/tagatose bisphosphate aldolase	N/A
KOfam	UHGV-0098366_9	K01915	145.1	4.69435e-43	glnA, GLUL; glutamine synthetase [EC:6.3.1.2]	N/A
PHROG	UHGV-0098366_9	phrog_21628	61.8	5.8e-18	N/A	unknown function
UniRef90	UHGV-0098366_9	UniRef90_F3AMP3	1394.0	0	Gln-synt_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0098366_9	658088.HMPREF0987_01717	1394.0	0	Glutamine synthetase type III N terminal	N/A
Pfam	UHGV-0098366_9	PF12437	N/A	N/A	Glutamine synthetase type III N terminal	GSIII_N
Pfam	UHGV-0098366_9	PF00120	N/A	N/A	Glutamine synthetase, catalytic domain	Gln-synt_C
Pfam	UHGV-0098366_9	PF18318	N/A	N/A	Glutamine synthetase C-terminal domain	Gln-synt_C-ter
COG	UHGV-0098366_9	COG3968	N/A	N/A	Glutamine synthetase type III	N/A
KOfam	UHGV-0098366_10	K14059	71.0	1.3e-20	int; integrase	N/A
PHROG	UHGV-0098366_10	phrog_1	105.1	4.4e-31	integrase	integration and excision
UniRef90	UHGV-0098366_10	UniRef90_S2ZG06	736.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0098366_10	1235792.C808_05256	448.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0098366_10	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0098366_10	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0098366_10	PF00589,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0098366_11	UniRef90_A7B3P6	222.0	0	N/A	N/A
eggNOG-mapper	UHGV-0098366_11	411470.RUMGNA_02177	222.0	0	belongs to the thioredoxin family	N/A
COG	UHGV-0098366_11	COG3118	N/A	N/A	Chaperedoxin CnoX, contains thioredoxin-like and TPR-like domains, YbbN/TrxSC family	N/A
KOfam	UHGV-0098366_13	K18830	59.9	3.7e-17	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0098366_13	phrog_8	53.5	0.0000000000000035	transcriptional regulator	transcription regulation
UniRef90	UHGV-0098366_13	UniRef90_UPI00156DE017	184.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0098366_13	1235798.C817_05486	140.0	3.17002e-41	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0098366_13	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0098366_13	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0098366_13	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0098366_16	phrog_32192	52.3	0.0000000000000087	N/A	unknown function
eggNOG-mapper	UHGV-0098366_16	397290.C810_05153	56.2	0.0000000106	N/A	N/A
PHROG	UHGV-0098366_19	phrog_2011	202.0	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0098366_19	UniRef90_J9GA63	377.0	0	Prophage antirepressor-related protein	N/A
eggNOG-mapper	UHGV-0098366_19	1151292.QEW_2476	149.0	8.69001e-41	BRO family, N-terminal domain	N/A
Pfam	UHGV-0098366_19	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
COG	UHGV-0098366_19	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0098366_19	PF02498,COG3617	N/A	N/A	N/A	N/A
PHROG	UHGV-0098366_23	phrog_253	119.2	3.4e-35	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0098366_23	UniRef90_A7B3R2	164.0	0	Siphovirus Gp157	N/A
eggNOG-mapper	UHGV-0098366_23	411470.RUMGNA_02192	164.0	0	Siphovirus Gp157	N/A
Pfam	UHGV-0098366_23	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0098366_23	PF05565	N/A	N/A	N/A	N/A
UniRef90	UHGV-0098366_24	UniRef90_R6RDX0	84.7	2.61e-20	Arginyl-tRNA synthetase	N/A
PHROG	UHGV-0098366_25	phrog_2872	209.9	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0098366_25	UniRef90_R6SKG3	409.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0098366_25	1304866.K413DRAFT_0827	342.0	0	AAA domain	N/A
Pfam	UHGV-0098366_25	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0098366_25	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0098366_26	phrog_18107	330.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0098366_26	1256908.HMPREF0373_00659	307.0	0	N/A	N/A
structural_annotation	UHGV-0098366_26	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0098366_27	phrog_3490	166.1	0	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0098366_27	UniRef90_S2YML6	337.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0098366_27	1256908.HMPREF0373_00660	233.0	0	N/A	N/A
Pfam	UHGV-0098366_27	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0098366_27	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0098366_28	K02316	64.3	2.2e-18	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0098366_28	phrog_11992	172.4	0	N/A	unknown function
UniRef90	UHGV-0098366_28	UniRef90_S2ZHF2	338.0	0	ZnF_CHCC domain-containing protein	N/A
eggNOG-mapper	UHGV-0098366_28	1304866.K413DRAFT_0824	218.0	0	CHC2 zinc finger	N/A
PADLOC	UHGV-0098366_28	drt-UG29	62.8	3.8e-18	DRT	DRT
Pfam	UHGV-0098366_28	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0098366_28	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0098366_28	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-0098366_29	phrog_8841	623.4	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0098366_29	UniRef90_UPI00156EF603	1123.0	0	N/A	N/A
eggNOG-mapper	UHGV-0098366_29	476272.RUMHYD_01742	847.0	0	N/A	N/A
Pfam	UHGV-0098366_29	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0098366_29	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0098366_29	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0098366_29	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
PHROG	UHGV-0098366_30	phrog_23374	62.0	8.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0098366_30	1256908.HMPREF0373_00664	62.4	0.00000000000325	N/A	N/A
PHROG	UHGV-0098366_35	phrog_10714	69.7	4.3e-20	N/A	unknown function
PHROG	UHGV-0098366_36	phrog_8684	98.6	1.2e-29	N/A	unknown function
UniRef90	UHGV-0098366_36	UniRef90_A0A855H8M3	186.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0098366_36	411470.RUMGNA_02199	95.9	2.79e-23	N/A	N/A
Pfam	UHGV-0098366_36	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0098366_36	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0098366_36	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0098366_38	phrog_15198	65.7	6.3e-19	N/A	unknown function
UniRef90	UHGV-0098366_38	UniRef90_A0A3A5TWI3	219.0	0	N/A	N/A
PHROG	UHGV-0098366_40	phrog_36	67.3	2.9e-19	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0098366_40	742765.HMPREF9457_02116	158.0	0	N/A	N/A
structural_annotation	UHGV-0098366_40	PF02996	N/A	N/A	N/A	N/A
KOfam	UHGV-0098366_42	K07474	137.9	1.3e-40	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0098366_42	phrog_51	154.6	0	terminase small subunit	head and packaging
UniRef90	UHGV-0098366_42	UniRef90_A0A855HE54	285.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0098366_42	1235792.C808_05330	192.0	0	Terminase small subunit	N/A
Pfam	UHGV-0098366_42	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0098366_42	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-0098366_43	K06909	286.3	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0098366_43	phrog_3717	271.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0098366_43	UniRef90_A0A2N5P5F6	853.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0098366_43	1430331.EP10_10340	597.0	0	Phage terminase, large subunit	N/A
Pfam	UHGV-0098366_43	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0098366_43	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0098366_43	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0098366_43	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0098366_43	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0098366_44	phrog_64	154.9	0	portal protein	head and packaging
UniRef90	UHGV-0098366_44	UniRef90_UPI001370FE05	171.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0098366_44	1235796.C815_00925	261.0	0	Phage portal protein, SPP1 family	N/A
Pfam	UHGV-0098366_44	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0098366_44	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0098366	Yes	26,452	39	60	1