vOTU vOTU-098301

vOTU: vOTU-098301

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-098301
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00030 → vOTU-098301
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea_A → Dorea_A longicatena
Host range breadth	Species
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1336111
Biosample ID	SAMN00792046
Genome length (bp)	22,255 bps
CheckV completeness	56.40% (Medium-quality)
CDS count	28
CDS density	93.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Dorea_A → Dorea_A longicatena	Total connections	7	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 56.4)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1336111_1	411461.DORFOR_00750	120.0	7.22e-32	COG COG1783 Phage terminase large subunit	N/A
COG	UHGV-1336111_1	COG1783	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-1336111_2	phrog_533	430.3	0	portal protein	head and packaging
UniRef90	UHGV-1336111_2	UniRef90_A6BES5	820.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1336111_2	411462.DORLON_00795	820.0	0	COG NOG25118 non supervised orthologous group	N/A
Pfam	UHGV-1336111_2	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1336111_2	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_3	phrog_21033	339.3	0	N/A	unknown function
UniRef90	UHGV-1336111_3	UniRef90_A0A173VG74	963.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-1336111_3	411461.DORFOR_00748	766.0	0	N/A	N/A
Pfam	UHGV-1336111_3	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1336111_3	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1336111_3	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_4	phrog_3711	93.3	1.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-1336111_4	411462.DORLON_00789	135.0	1.26001e-40	N/A	N/A
PHROG	UHGV-1336111_5	phrog_13199	75.6	3.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1336111_5	476272.RUMHYD_02851	91.7	1.03e-23	N/A	N/A
KOfam	UHGV-1336111_6	K07584	56.4	5.9e-16	N/A	N/A
PHROG	UHGV-1336111_6	phrog_4478	85.6	3.8e-25	peptidase	other
UniRef90	UHGV-1336111_6	UniRef90_A0A415D8F7	144.0	3.11088e-43	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-1336111_6	411462.DORLON_00788	141.0	1.26958e-42	Pfam:Peptidase_C108	N/A
Pfam	UHGV-1336111_6	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-1336111_6	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1336111_6	PF04327,NF011124,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_7	phrog_2303	156.0	0	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1336111_7	411461.DORFOR_00745	293.0	0	N/A	N/A
structural_annotation	UHGV-1336111_7	PF10788,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_8	phrog_10	169.7	0	major head protein	head and packaging
UniRef90	UHGV-1336111_8	UniRef90_A0A173TT07	609.0	0	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
eggNOG-mapper	UHGV-1336111_8	411461.DORFOR_00744	578.0	0	COG NOG20168 non supervised orthologous group	N/A
Pfam	UHGV-1336111_8	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1336111_8	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1336111_8	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1336111_8	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_9	phrog_541	100.3	1.4e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-1336111_9	411461.DORFOR_00743	227.0	0	N/A	N/A
PHROG	UHGV-1336111_10	phrog_3366	134.4	4.79999e-40	N/A	unknown function
eggNOG-mapper	UHGV-1336111_10	411462.DORLON_00784	200.0	0	N/A	N/A
Pfam	UHGV-1336111_10	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1336111_10	PF20536,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_11	phrog_556	141.1	2.79979e-42	minor head protein	head and packaging
UniRef90	UHGV-1336111_11	UniRef90_UPI00093128B4	173.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1336111_11	411461.DORFOR_00741	171.0	0	N/A	N/A
structural_annotation	UHGV-1336111_11	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_12	phrog_3266	154.0	0	tail completion	connector
eggNOG-mapper	UHGV-1336111_12	658655.HMPREF0988_02556	186.0	0	N/A	N/A
structural_annotation	UHGV-1336111_12	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_13	phrog_3099	147.4	6.72623e-44	N/A	unknown function
eggNOG-mapper	UHGV-1336111_13	411468.CLOSCI_02404	199.0	0	N/A	N/A
structural_annotation	UHGV-1336111_13	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_14	phrog_4450	103.6	1.4e-30	N/A	unknown function
UniRef90	UHGV-1336111_14	UniRef90_UPI0018AB083C	57.0	0.000000095	AP endonuclease	N/A
eggNOG-mapper	UHGV-1336111_14	1235792.C808_05374	100.0	1.31e-25	N/A	N/A
Pfam	UHGV-1336111_14	PF20378	N/A	N/A	N/A	DUF6673
structural_annotation	UHGV-1336111_14	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_15	phrog_706	154.9	0	N/A	unknown function
UniRef90	UHGV-1336111_15	UniRef90_UPI0018AAC0D2	291.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1336111_15	1235792.C808_05375	144.0	6.48002e-41	COG NOG24969 non supervised orthologous group	N/A
Pfam	UHGV-1336111_15	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1336111_15	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_16	phrog_19074	478.1	0	N/A	unknown function
UniRef90	UHGV-1336111_16	UniRef90_UPI0018ABC231	823.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1336111_16	1235792.C808_05377	524.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1336111_16	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-1336111_16	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-1336111_16	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1336111_16	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_17	phrog_33	58.3	9.3e-17	distal tail protein Dit	tail
UniRef90	UHGV-1336111_17	UniRef90_A0A414S2W8	175.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1336111_17	1235798.C817_02569	157.0	7.00649e-45	tail component	N/A
COG	UHGV-1336111_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1336111_17	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_18	phrog_13289	355.6	0	tail protein	tail
UniRef90	UHGV-1336111_18	UniRef90_UPI001570BE36	748.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-1336111_18	1235798.C817_04594	533.0	0	Prophage endopeptidase tail	N/A
Pfam	UHGV-1336111_18	PF18994	N/A	N/A	Prophage endopeptidase tail N-terminal domain	Prophage_tailD1
Pfam	UHGV-1336111_18	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1336111_18	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1336111_18	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1336111_18	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1336111_19	phrog_14030	164.2	0	N/A	unknown function
UniRef90	UHGV-1336111_19	UniRef90_UPI0018999D57	535.0	0	phage tail tip lysozyme	N/A
eggNOG-mapper	UHGV-1336111_19	33035.JPJF01000093_gene2240	379.0	0	NlpC/P60 family	N/A
Pfam	UHGV-1336111_19	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-1336111_19	PF00877	N/A	N/A	NlpC/P60 family	NLPC_P60
COG	UHGV-1336111_19	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1336111_19	PF18013,PF05382,NF033742,COG0791	N/A	N/A	N/A	N/A
KOfam	UHGV-1336111_20	K22699	43.9	0.0000000000022	thi4; sulfide-dependent adenosine diphosphate thiazole synthase [EC:2.4.2.59]	N/A
UniRef90	UHGV-1336111_20	UniRef90_UPI001C378F1C	256.0	0	FAD-dependent oxidoreductase	N/A
eggNOG-mapper	UHGV-1336111_20	1158294.JOMI01000003_gene2017	176.0	1.12104e-44	geranylgeranyl reductase activity	N/A
Pfam	UHGV-1336111_20	PF12831	N/A	N/A	FAD dependent oxidoreductase	FAD_oxidored
COG	UHGV-1336111_20	COG0644	N/A	N/A	Dehydrogenase (flavoprotein)	N/A
UniRef90	UHGV-1336111_22	UniRef90_A0A414S363	341.0	0	N/A	N/A
eggNOG-mapper	UHGV-1336111_22	44251.PDUR_18325	172.0	0	N/A	N/A
UniRef90	UHGV-1336111_25	UniRef90_UPI0013C32EB3	60.8	0.000000000364	propionyl-CoA synthetase	N/A
eggNOG-mapper	UHGV-1336111_25	1224318.DT73_00410	67.0	0.000000000000263	N/A	N/A
PHROG	UHGV-1336111_26	phrog_1009	40.1	0.000000000057	N/A	unknown function
UniRef90	UHGV-1336111_26	UniRef90_A0A173RD60	170.0	0	Branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-1336111_26	742765.HMPREF9457_03364	179.0	0	N/A	N/A
PHROG	UHGV-1336111_27	phrog_1129	80.7	9.8e-24	holin	lysis
UniRef90	UHGV-1336111_27	UniRef90_UPI00156E9657	143.0	9.86514e-43	phage holin family protein	N/A
eggNOG-mapper	UHGV-1336111_27	553973.CLOHYLEM_07148	129.0	1.2e-37	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-1336111_27	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-1336111_27	PF16079	N/A	N/A	N/A	N/A
KOfam	UHGV-1336111_28	K01447	53.3	0.0000000000000026	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1336111_28	phrog_833	192.9	0	endolysin	lysis
UniRef90	UHGV-1336111_28	UniRef90_R5XMS1	648.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1336111_28	411460.RUMTOR_02101	489.0	0	COG NOG33632 non supervised orthologous group	N/A
Pfam	UHGV-1336111_28	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1336111_28	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-1336111_28	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1336111	Yes	22,255	38	56	1
UHGV-0130562	No	22,253	38	56	1