vOTU vOTU-099088

vOTU: vOTU-099088

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-099088
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01317 → vGENUS-01472 → vOTU-099088
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Erysipelatoclostridium → Erysipelatoclostridium ramosum
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0060742
Biosample ID	SAMEA2338748
Genome length (bp)	31,272 bps
CheckV completeness	87.35% (Medium-quality)
CDS count	56
CDS density	94.26%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Erysipelatoclostridium → Erysipelatoclostridium ramosum	Total connections	88	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Erysipelatoclostridium → Erysipelatoclostridium ramosum	Total connections	13	Host agreement	92.31

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 87.35)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0060742_1	K07217	268.5	0	K07217; Mn-containing catalase	N/A
PHROG	UHGV-0060742_1	phrog_7573	283.2	0	N/A	unknown function
UniRef90	UHGV-0060742_1	UniRef90_UPI0004978D44	446.0	0	manganese catalase family protein	N/A
eggNOG-mapper	UHGV-0060742_1	1232446.BAIE02000003_gene849	466.0	0	PFAM Manganese containing catalase	N/A
Pfam	UHGV-0060742_1	PF05067	N/A	N/A	Manganese containing catalase	Mn_catalase
COG	UHGV-0060742_1	COG3546	N/A	N/A	Mn-containing catalase (includes spore coat protein CotJC)	N/A
eggNOG-mapper	UHGV-0060742_3	1232446.BAIE02000003_gene848	117.0	3.52e-34	N/A	N/A
KOfam	UHGV-0060742_6	K01447	78.1	1.6e-22	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0060742_6	phrog_3088	244.9	0	amidase	lysis
UniRef90	UHGV-0060742_6	UniRef90_UPI001C253586	753.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0060742_6	1232446.BAIE02000094_gene1162	589.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0060742_6	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0060742_6	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0060742_6	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-0060742_6	PF01510,PF18342,MF_04111,NF008758,NF040670,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_7	phrog_4105	89.3	2.2e-27	N/A	unknown function
eggNOG-mapper	UHGV-0060742_7	1121105.ATXL01000027_gene760	75.1	0.00000000000000149	N/A	N/A
PHROG	UHGV-0060742_8	phrog_1129	74.2	1.2e-21	holin	lysis
UniRef90	UHGV-0060742_8	UniRef90_A0A0J8Z1S7	150.0	1.4013e-45	Holin protein	N/A
eggNOG-mapper	UHGV-0060742_8	1123075.AUDP01000020_gene1532	104.0	3.61e-28	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0060742_8	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0060742_8	PF06946	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0060742_12	PF07703,TIGR02657,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_13	phrog_32322	56.3	5.2e-16	N/A	unknown function
UniRef90	UHGV-0060742_13	UniRef90_A0A7U9CLF4	209.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-0060742_13	1232446.BAIE02000002_gene840	209.0	0	N/A	N/A
Pfam	UHGV-0060742_13	PF13754	N/A	N/A	N/A	Big_3_4
structural_annotation	UHGV-0060742_13	PF13754	N/A	N/A	N/A	N/A
KOfam	UHGV-0060742_14	K13276	54.3	2.3e-16	bpr; bacillopeptidase F [EC:3.4.21.-]	N/A
PHROG	UHGV-0060742_14	phrog_11157	203.0	0	N/A	unknown function
UniRef90	UHGV-0060742_14	UniRef90_A0A1Y4N8R1	358.0	0	Big_13 domain-containing protein	N/A
eggNOG-mapper	UHGV-0060742_14	1232446.BAIE02000002_gene839	377.0	0	N/A	N/A
Pfam	UHGV-0060742_14	PF19077	N/A	N/A	Bacterial Ig-like domain	Big_13
Pfam	UHGV-0060742_14	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-0060742_14	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0060742_14	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0060742_15	999413.HMPREF1094_01998	84.0	1.22e-16	N/A	N/A
PHROG	UHGV-0060742_16	phrog_13289	363.4	0	tail protein	tail
UniRef90	UHGV-0060742_16	UniRef90_A0A3E3AEF9	1329.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0060742_16	1232446.BAIE02000002_gene836	1330.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0060742_16	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-0060742_16	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-0060742_16	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0060742_16	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0060742_16	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_17	phrog_33	65.2	1.8e-18	distal tail protein Dit	tail
UniRef90	UHGV-0060742_17	UniRef90_A0A3E3AF06	480.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0060742_17	1232446.BAIE02000002_gene835	479.0	0	phage tail	N/A
COG	UHGV-0060742_17	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0060742_17	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_18	phrog_23464	217.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0060742_18	1232446.BAIE02000002_gene834	802.0	0	tape measure	N/A
COG	UHGV-0060742_18	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0060742_18	PF20155	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0060742_20	1235798.C817_04591	54.7	0.000000189	N/A	N/A
PHROG	UHGV-0060742_21	phrog_88	70.2	3.2e-20	major tail protein	tail
UniRef90	UHGV-0060742_21	UniRef90_A0A3E3ACS6	400.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0060742_21	33035.JPJF01000039_gene278	160.0	0	N/A	N/A
structural_annotation	UHGV-0060742_21	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
UniRef90	UHGV-0060742_22	UniRef90_R6UNR2	127.0	2.72e-34	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0060742_22	1232446.BAIE02000002_gene830	306.0	0	N/A	N/A
structural_annotation	UHGV-0060742_22	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_23	phrog_78	50.6	0.000000000000036	tail terminator	connector
eggNOG-mapper	UHGV-0060742_23	1232446.BAIE02000002_gene829	218.0	0	N/A	N/A
structural_annotation	UHGV-0060742_23	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_24	phrog_19734	114.7	6.4e-34	N/A	unknown function
UniRef90	UHGV-0060742_24	UniRef90_A0A3E3ACV2	231.0	0	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0060742_24	1232446.BAIE02000002_gene828	231.0	0	N/A	N/A
structural_annotation	UHGV-0060742_24	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_25	phrog_2550	84.7	5.4e-25	N/A	unknown function
UniRef90	UHGV-0060742_25	UniRef90_R5V091	55.8	0.0000000311	Phage related protein	N/A
eggNOG-mapper	UHGV-0060742_25	1232446.BAIE02000002_gene827	172.0	0	N/A	N/A
NCBIFam	UHGV-0060742_25	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0060742_25	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_26	phrog_10	203.4	0	major head protein	head and packaging
UniRef90	UHGV-0060742_26	UniRef90_A0A3E3ACQ3	806.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0060742_26	1232446.BAIE02000002_gene826	808.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0060742_26	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0060742_26	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0060742_26	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0060742_26	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0060742_27	K06904	147.5	1.30321e-43	N/A	N/A
PHROG	UHGV-0060742_27	phrog_80	175.6	0	head maturation protease	head and packaging
UniRef90	UHGV-0060742_27	UniRef90_A0A3E3AEE5	384.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0060742_27	1232446.BAIE02000002_gene825	389.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0060742_27	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0060742_27	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0060742_27	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0060742_27	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_28	phrog_12	165.3	0	portal protein	head and packaging
UniRef90	UHGV-0060742_28	UniRef90_A0A3E3AEZ3	786.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0060742_28	1232446.BAIE02000002_gene824	798.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0060742_28	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0060742_28	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0060742_28	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0060742_28	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_29	phrog_9	307.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0060742_29	UniRef90_A0A3E3ADF9	1183.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0060742_29	1232446.BAIE02000002_gene823	1184.0	0	Phage Terminase	N/A
Pfam	UHGV-0060742_29	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0060742_29	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0060742_29	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0060742_29	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_30	phrog_361	96.7	2e-28	terminase small subunit	head and packaging
UniRef90	UHGV-0060742_30	UniRef90_A0A3E3ADK1	255.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0060742_30	1232446.BAIE02000002_gene822	255.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-0060742_30	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0060742_30	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_32	phrog_119	69.0	6.7e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060742_32	UniRef90_A0A3E3ADS4	224.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0060742_32	1232446.BAIE02000002_gene820	224.0	0	HNH nucleases	N/A
COG	UHGV-0060742_32	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0060742_33	PF04545,PF01920,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0060742_36	K02314	151.8	5.60519e-45	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0060742_36	phrog_19	150.6	1.12104e-44	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060742_36	UniRef90_UPI001BA4C082	390.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0060742_36	1232446.BAIE02000002_gene817	306.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0060742_36	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0060742_36	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0060742_36	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_37	phrog_2289	47.8	0.00000000000027	helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060742_37	UniRef90_UPI001BAD89C6	99.8	4.79e-26	replicative helicase loader/inhibitor	N/A
PHROG	UHGV-0060742_38	phrog_5968	174.9	0	replisome organizer	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0060742_38	UniRef90_UPI001D8012F5	212.0	0	phage replisome organizer N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0060742_38	565664.EFXG_01794	199.0	0	Phage replisome organizer, N-terminal domain protein	N/A
Pfam	UHGV-0060742_38	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
NCBIFam	UHGV-0060742_38	TIGR01714.1	N/A	N/A	phage replisome organizer, putative, N-terminal region	N/A
COG	UHGV-0060742_38	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0060742_38	PF09681,TIGR01714,COG3388	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0060742_40	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0060742_41	1232446.BAIE02000002_gene811	239.0	0	N/A	N/A
PHROG	UHGV-0060742_44	phrog_5051	49.0	0.00000000000012	N/A	unknown function
KOfam	UHGV-0060742_46	K04763	169.2	0	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0060742_46	phrog_1	134.4	1.3e-39	integrase	integration and excision
UniRef90	UHGV-0060742_46	UniRef90_UPI000E54C62B	555.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0060742_46	1232449.BAHV02000016_gene1840	259.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0060742_46	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0060742_46	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0060742_46	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0060742_46	PF00589,PF13495,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_47	phrog_3634	179.5	0	N/A	unknown function
UniRef90	UHGV-0060742_47	UniRef90_A0A3E3AEX0	458.0	0	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0060742_47	1232446.BAIE02000002_gene804	452.0	0	nucleoside 2-deoxyribosyltransferase	N/A
COG	UHGV-0060742_47	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0060742_47	PF13676,MF_03036,TIGR03646,COG4916	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_50	phrog_8470	185.5	0	N/A	unknown function
UniRef90	UHGV-0060742_50	UniRef90_UPI000495B0A2	960.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0060742_50	1232446.BAIE02000002_gene802	960.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0060742_50	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0060742_50	PF14284,NF008072	N/A	N/A	N/A	N/A
PHROG	UHGV-0060742_51	phrog_7445	57.8	2.1e-16	N/A	unknown function
UniRef90	UHGV-0060742_51	UniRef90_UPI00189C8A62	259.0	0	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-0060742_51	1268240.ATFI01000007_gene436	72.4	0.0000000000000291	PcfK-like protein	N/A
Pfam	UHGV-0060742_51	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0060742_51	PF14058	N/A	N/A	N/A	N/A
UniRef90	UHGV-0060742_54	UniRef90_A0A3E3ACS2	163.0	0	DNA-binding protein	N/A
PHROG	UHGV-0060742_56	phrog_463	43.6	0.000000000005	anti-repressor	transcription regulation
UniRef90	UHGV-0060742_56	UniRef90_UPI001D089662	95.1	7.1e-23	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-0060742_56	1232446.BAIE02000002_gene798	202.0	0	ORF6C domain	N/A
Pfam	UHGV-0060742_56	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-0060742_56	COG3617	N/A	N/A	Prophage antirepressor	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0060742	Yes	31,272	35	87	1