vOTU vOTU-099309

vOTU: vOTU-099309

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-099309
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00126 → vGENUS-00385 → vOTU-099309
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1502598
Biosample ID	SAMEA3664999
Genome length (bp)	35,254 bps
CheckV completeness	68.16% (Medium-quality)
CDS count	53
CDS density	92.07%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	119	Host agreement	99.16
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Mediterraneibacter → Mediterraneibacter faecis	Total connections	17	Host agreement	94.12

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 68.16)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1502598_2	phrog_18444	82.8	2.3e-24	N/A	unknown function
PHROG	UHGV-1502598_3	phrog_6616	461.2	0	tail protein	tail
UniRef90	UHGV-1502598_3	UniRef90_A0A173TV73	567.0	0	Collagen triple helix repeat (20 copies)	N/A
eggNOG-mapper	UHGV-1502598_3	357276.EL88_12830	266.0	0	Phage minor structural protein	N/A
COG	UHGV-1502598_3	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1502598_3	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_4	phrog_1194	58.6	1e-16	N/A	unknown function
structural_annotation	UHGV-1502598_4	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_5	phrog_1535	231.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1502598_5	UniRef90_A0A173R880	359.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1502598_5	476272.RUMHYD_01785	447.0	0	phage tail tape measure protein	N/A
COG	UHGV-1502598_5	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_6	phrog_706	123.8	7.7e-37	N/A	unknown function
UniRef90	UHGV-1502598_6	UniRef90_UPI00156F9D1C	291.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1502598_6	411459.RUMOBE_01383	218.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1502598_6	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1502598_6	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_7	phrog_11299	116.5	1.7e-34	N/A	unknown function
eggNOG-mapper	UHGV-1502598_7	33035.JPJF01000106_gene3125	102.0	6.39e-26	N/A	N/A
structural_annotation	UHGV-1502598_7	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_8	phrog_3099	119.3	2.8e-35	N/A	unknown function
eggNOG-mapper	UHGV-1502598_8	476272.RUMHYD_01782	252.0	0	N/A	N/A
structural_annotation	UHGV-1502598_8	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_9	phrog_3266	85.3	5e-25	tail completion	connector
eggNOG-mapper	UHGV-1502598_9	476272.RUMHYD_01781	240.0	0	N/A	N/A
structural_annotation	UHGV-1502598_9	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_10	phrog_556	74.5	1e-21	minor head protein	head and packaging
UniRef90	UHGV-1502598_10	UniRef90_UPI000E4989EB	152.0	1.4013e-44	minor capsid protein	N/A
eggNOG-mapper	UHGV-1502598_10	476272.RUMHYD_01780	209.0	0	N/A	N/A
Pfam	UHGV-1502598_10	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1502598_10	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_11	phrog_3366	104.3	9.6e-31	N/A	unknown function
eggNOG-mapper	UHGV-1502598_11	476272.RUMHYD_01779	188.0	0	N/A	N/A
structural_annotation	UHGV-1502598_11	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_13	phrog_541	96.3	2.1e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-1502598_13	476272.RUMHYD_01778	203.0	0	N/A	N/A
UniRef90	UHGV-1502598_15	UniRef90_A0A0M2NI16	304.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-1502598_15	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_16	phrog_194	61.7	6.6e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-1502598_16	UniRef90_UPI001C1258D3	59.3	0.00000018	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1502598_16	397290.C810_05223	90.9	5.53e-20	Phage minor structural protein GP20	N/A
Pfam	UHGV-1502598_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1502598_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_17	phrog_581	254.4	0	minor head protein	head and packaging
UniRef90	UHGV-1502598_17	UniRef90_A0A373MXM0	754.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1502598_17	476272.RUMHYD_01761	468.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1502598_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1502598_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1502598_17	PF06152	N/A	N/A	N/A	N/A
Pfam	UHGV-1502598_18	PF01848	N/A	N/A	Hok/gef family	HOK_GEF
PHROG	UHGV-1502598_19	phrog_1048	135.9	7.14662e-44	N/A	unknown function
UniRef90	UHGV-1502598_19	UniRef90_A0A373MX10	340.0	0	N/A	N/A
eggNOG-mapper	UHGV-1502598_19	457412.RSAG_01107	207.0	0	N/A	N/A
Pfam	UHGV-1502598_19	PF11195	N/A	N/A	N/A	DUF2829
dbAPIS	UHGV-1502598_19	APIS029	N/A	N/A	Tad2 is a "sponge" that sequesters the immune signaling molecules produced by Thoeris TIR-domain proteins in response to phage.	N/A
structural_annotation	UHGV-1502598_19	PF11195	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_20	phrog_1233	85.7	5.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1502598_20	411490.ANACAC_00786	86.3	5.15e-20	N/A	N/A
structural_annotation	UHGV-1502598_20	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_21	phrog_533	257.3	0	portal protein	head and packaging
UniRef90	UHGV-1502598_21	UniRef90_A0A173R9C0	343.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1502598_21	476272.RUMHYD_01758	338.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1502598_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-1502598_22	K06909	115.8	4.2e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1502598_22	phrog_10250	162.3	0	N/A	unknown function
UniRef90	UHGV-1502598_22	UniRef90_A0A373MY72	845.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1502598_22	397290.C810_05187	688.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1502598_22	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-1502598_22	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1502598_22	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1502598_22	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-1502598_23	K07474	106.4	5.5e-31	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1502598_23	phrog_51	112.1	4.5e-33	terminase small subunit	head and packaging
UniRef90	UHGV-1502598_23	UniRef90_A0A373MWB9	298.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1502598_23	1235800.C819_00494	105.0	4.17e-27	Terminase small subunit	N/A
Pfam	UHGV-1502598_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1502598_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1502598_23	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_25	phrog_33130	99.5	1.3e-29	N/A	unknown function
structural_annotation	UHGV-1502598_25	PF10922,MF_00839	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1502598_28	476272.RUMHYD_01751	132.0	7.3e-39	N/A	N/A
PHROG	UHGV-1502598_31	phrog_8684	59.9	7.3e-19	N/A	unknown function
UniRef90	UHGV-1502598_31	UniRef90_UPI001D0293FA	288.0	0	YopX family protein	N/A
eggNOG-mapper	UHGV-1502598_31	1235800.C819_02639	80.9	1.08e-17	YopX protein	N/A
Pfam	UHGV-1502598_31	PF09643	N/A	N/A	YopX protein	YopX
structural_annotation	UHGV-1502598_31	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_32	phrog_22292	119.8	1.7e-35	N/A	unknown function
eggNOG-mapper	UHGV-1502598_34	887325.HMPREF0381_0090	95.5	1.72e-24	N/A	N/A
PHROG	UHGV-1502598_35	phrog_26445	90.3	1.5e-26	N/A	unknown function
UniRef90	UHGV-1502598_35	UniRef90_UPI001EDD5E1E	146.0	1.66755e-43	Trp family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1502598_35	742765.HMPREF9457_02112	84.3	1.12e-19	N/A	N/A
structural_annotation	UHGV-1502598_35	PF00196	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_36	phrog_25456	80.1	2.3e-23	N/A	unknown function
PHROG	UHGV-1502598_39	phrog_9822	156.1	0	N/A	unknown function
structural_annotation	UHGV-1502598_41	PF17400	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_43	phrog_9298	369.6	0	radical SAM domain protein	other
UniRef90	UHGV-1502598_43	UniRef90_UPI00156DBFFE	614.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-1502598_43	1235793.C809_02647	435.0	0	N/A	N/A
COG	UHGV-1502598_43	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1502598_43	MF_01864,NF010916,COG2516	N/A	N/A	N/A	N/A
PHROG	UHGV-1502598_44	phrog_954	189.0	0	DNA methyltransferase	other
UniRef90	UHGV-1502598_44	UniRef90_UPI001D01AC8C	363.0	0	class I SAM-dependent methyltransferase	N/A
eggNOG-mapper	UHGV-1502598_44	1280698.AUJS01000007_gene1028	332.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-1502598_44	MTase_II_00074	184.5	0	Type II methyltransferase	RM
Pfam	UHGV-1502598_44	PF08241	N/A	N/A	Methyltransferase domain	Methyltransf_11
COG	UHGV-1502598_44	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-1502598_44	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
KOfam	UHGV-1502598_45	K00558	186.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1502598_45	phrog_116	220.4	0	DNA methyltransferase	other
UniRef90	UHGV-1502598_45	UniRef90_A0A373MWF0	837.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1502598_45	742740.HMPREF9474_04317	699.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1502598_45	MTase_II_00020	92.9	1.2e-30	Type II methyltransferase	RM
Pfam	UHGV-1502598_45	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-1502598_45	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1502598_45	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1502598_46	K00390	87.9	9.5e-27	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-1502598_46	phrog_424	95.9	1.4e-28	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1502598_46	UniRef90_A0A373SW63	744.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-1502598_46	1235800.C819_02256	611.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-1502598_46	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1502598_46	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1502598_46	PF01507,MF_00063,TIGR00434,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1502598_47	525919.Apre_0824	48.5	0.00000233	N/A	N/A
PHROG	UHGV-1502598_48	phrog_15077	55.7	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1502598_48	742740.HMPREF9474_03494	76.3	0.000000000000111	N/A	N/A
UniRef90	UHGV-1502598_52	UniRef90_UPI0006C0F90C	307.0	0	N/A	N/A
Pfam	UHGV-1502598_52	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1502598_52	PF04448,NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1502598_53	PF09889,MF_00649,NF001638,COG4068	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1502598	Yes	35,254	41	68	1