vOTU vOTU-099360

vOTU: vOTU-099360

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-099360
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-00168 → vGENUS-00905 → vOTU-099360
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0101691
Biosample ID	SAMEA3708608
Genome length (bp)	45,455 bps
CheckV completeness	83.60% (Medium-quality)
CDS count	59
CDS density	94.19%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	495	Host agreement	98.18
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	29	Host agreement	89.66

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 83.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0101691_1	UniRef90_A0A2A6ZNH3	167.0	0	N/A	N/A
KOfam	UHGV-0101691_2	K07727	76.3	6.9e-22	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0101691_2	UniRef90_A0A2A7AFF5	141.0	3.15012e-42	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0101691_2	1235802.C823_05610	94.4	2.7e-24	helix-turn-helix	N/A
Pfam	UHGV-0101691_2	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0101691_2	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
UniRef90	UHGV-0101691_3	UniRef90_A0A416VIT4	63.2	0.0000000000206	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0101691_3	1408437.JNJN01000040_gene204	88.2	6.76e-22	N/A	N/A
structural_annotation	UHGV-0101691_3	PF13443,NF000090,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_5	phrog_38037	215.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0101691_9	742740.HMPREF9474_02999	60.5	0.000000000579	N/A	N/A
eggNOG-mapper	UHGV-0101691_10	1232443.BAIA02000032_gene1908	53.1	0.0000000104	N/A	N/A
PHROG	UHGV-0101691_11	phrog_15303	131.4	3e-39	N/A	unknown function
KOfam	UHGV-0101691_12	K08640	92.8	6.2e-29	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0101691_12	phrog_2649	94.3	1.8e-28	endolysin	lysis
UniRef90	UHGV-0101691_12	UniRef90_UPI001A9BC0D1	285.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-0101691_12	926561.KB900622_gene630	85.1	2.19e-18	Peptidase M15A	N/A
Pfam	UHGV-0101691_12	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
Pfam	UHGV-0101691_12	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0101691_12	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0101691_12	PF05951,PF01471,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_13	phrog_37604	168.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0101691_13	457412.RSAG_01109	117.0	1.18e-31	N/A	N/A
PHROG	UHGV-0101691_14	phrog_1382	68.6	3.7e-20	N/A	unknown function
eggNOG-mapper	UHGV-0101691_14	1410650.JHWL01000003_gene2818	77.0	4.75e-18	N/A	N/A
KOfam	UHGV-0101691_16	K00986	76.0	5.2e-22	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0101691_16	phrog_1423	156.2	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0101691_16	UniRef90_A0A1G5AFK2	259.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
eggNOG-mapper	UHGV-0101691_16	665950.HMPREF1025_01556	185.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0101691_16	icity0040	62.9	8.2e-18	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0101691_16	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0101691_16	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
structural_annotation	UHGV-0101691_18	PF05635,NF008911	N/A	N/A	N/A	N/A
KOfam	UHGV-0101691_19	K21449	68.1	1.6e-20	ata, sadA, emaA; trimeric autotransporter adhesin	N/A
PHROG	UHGV-0101691_19	phrog_24896	143.0	1.60028e-42	N/A	unknown function
UniRef90	UHGV-0101691_19	UniRef90_R5G2B7	1098.0	0	N/A	N/A
eggNOG-mapper	UHGV-0101691_19	657322.FPR_22010	1082.0	0	N/A	N/A
Pfam	UHGV-0101691_19	PF19789	N/A	N/A	N/A	DUF6273
PHROG	UHGV-0101691_20	phrog_6616	67.0	1.8e-19	tail protein	tail
eggNOG-mapper	UHGV-0101691_20	1235797.C816_04180	90.5	1.38e-17	N/A	N/A
structural_annotation	UHGV-0101691_20	PF16466,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_21	phrog_1194	67.1	2.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0101691_21	1232443.BAIA02000078_gene17	66.6	0.00000000000195	N/A	N/A
structural_annotation	UHGV-0101691_21	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_22	phrog_1535	205.3	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0101691_22	411459.RUMOBE_01384	168.0	5.17e-39	phage tail tape measure protein	N/A
COG	UHGV-0101691_22	COG5412	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0101691_23	phrog_706	134.5	7.6e-40	N/A	unknown function
UniRef90	UHGV-0101691_23	UniRef90_A0A1H7MNA7	226.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0101691_23	411902.CLOBOL_00127	206.0	0	N/A	N/A
Pfam	UHGV-0101691_23	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0101691_23	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_24	phrog_11299	86.2	4.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-0101691_24	1449050.JNLE01000003_gene3883	74.3	0.0000000000000185	N/A	N/A
PHROG	UHGV-0101691_25	phrog_3099	116.9	1.6e-34	N/A	unknown function
eggNOG-mapper	UHGV-0101691_25	33035.JPJF01000106_gene3126	177.0	0	N/A	N/A
structural_annotation	UHGV-0101691_25	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_26	phrog_3266	54.3	0.0000000000000018	tail completion	connector
eggNOG-mapper	UHGV-0101691_26	476272.RUMHYD_01781	144.0	1.79002e-41	N/A	N/A
structural_annotation	UHGV-0101691_26	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_27	phrog_556	69.0	5.5e-20	minor head protein	head and packaging
UniRef90	UHGV-0101691_27	UniRef90_A0A1H7MNM8	139.0	2.6e-39	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0101691_27	999413.HMPREF1094_00212	58.9	0.00000000704	Minor capsid protein	N/A
Pfam	UHGV-0101691_27	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0101691_27	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_28	phrog_3366	83.8	2.2e-24	N/A	unknown function
structural_annotation	UHGV-0101691_28	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_29	phrog_541	99.3	2.8e-29	head-tail adaptor	connector
eggNOG-mapper	UHGV-0101691_29	476272.RUMHYD_01778	117.0	1.24e-31	N/A	N/A
UniRef90	UHGV-0101691_31	UniRef90_A0A0M2NI16	279.0	0	S-l_SbsC_C domain-containing protein	N/A
structural_annotation	UHGV-0101691_31	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_32	phrog_194	68.0	1.9e-19	head scaffolding protein	head and packaging
UniRef90	UHGV-0101691_32	UniRef90_A0A1H7MPG5	180.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0101691_32	663278.Ethha_0093	65.5	0.000000000109	N/A	N/A
Pfam	UHGV-0101691_32	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0101691_32	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_35	phrog_355	54.6	0.0000000000000017	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0101691_35	UniRef90_A0A3E2XB99	160.0	0	N/A	N/A
eggNOG-mapper	UHGV-0101691_35	748224.HMPREF9436_01411	162.0	0	N/A	N/A
Pfam	UHGV-0101691_35	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0101691_35	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_37	phrog_581	241.5	0	minor head protein	head and packaging
UniRef90	UHGV-0101691_37	UniRef90_A0A355KVT5	469.0	0	Phage capsid protein (Fragment)	N/A
eggNOG-mapper	UHGV-0101691_37	33035.JPJF01000106_gene3134	295.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0101691_37	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0101691_37	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0101691_37	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_38	phrog_533	247.6	0	portal protein	head and packaging
UniRef90	UHGV-0101691_38	UniRef90_A0A1H7MQM5	543.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0101691_38	476272.RUMHYD_01758	377.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0101691_38	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0101691_39	K06909	132.9	3.1e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0101691_39	phrog_2	168.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0101691_39	UniRef90_A0A373MY72	488.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0101691_39	1120746.CCNL01000014_gene2093	466.0	0	DNA packaging	N/A
Pfam	UHGV-0101691_39	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0101691_39	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0101691_39	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0101691_39	PF04466,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_40	phrog_2412	91.8	7.2e-27	N/A	unknown function
UniRef90	UHGV-0101691_40	UniRef90_A0A150NN47	66.2	0.000000000145	N/A	N/A
eggNOG-mapper	UHGV-0101691_40	12402.Q708N5_9CAUD	63.2	0.000000000361	N/A	N/A
PHROG	UHGV-0101691_41	phrog_918	116.2	1.1e-34	N/A	unknown function
UniRef90	UHGV-0101691_41	UniRef90_UPI00115A7D93	107.0	1.77e-28	N/A	N/A
eggNOG-mapper	UHGV-0101691_41	469618.FVAG_01307	105.0	1.14e-28	N/A	N/A
Pfam	UHGV-0101691_41	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0101691_41	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-0101691_42	K03497	44.1	0.0000000000037	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0101691_42	phrog_620	156.8	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0101691_42	UniRef90_A0A1Q6PTZ2	246.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0101691_42	718252.FP2_00800	239.0	0	DNA binding	N/A
PADLOC	UHGV-0101691_42	MTase_II_00015	59.1	1.1e-16	Type II methyltransferase	RM
Pfam	UHGV-0101691_42	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0101691_42	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0101691_42	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_43	phrog_424	55.6	8.7e-16	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0101691_43	UniRef90_A0A3A9I8I3	265.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0101691_43	1408437.JNJN01000030_gene1072	252.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0101691_43	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
structural_annotation	UHGV-0101691_43	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0101691_44	718252.FP2_00810	600.0	0	N/A	N/A
structural_annotation	UHGV-0101691_44	PF00474,MF_01426,TIGR00912,COG0591	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_45	phrog_36	48.9	0.00000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0101691_45	UniRef90_UPI00189CA0E1	78.2	5.89e-16	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0101691_45	1235835.C814_01174	85.5	1.34e-19	N/A	N/A
structural_annotation	UHGV-0101691_45	PF07374,MF_00674,NF001074	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_48	phrog_28578	391.0	0	N/A	unknown function
KOfam	UHGV-0101691_53	K03497	148.2	9.66896e-44	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0101691_53	phrog_6218	477.6	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0101691_53	UniRef90_A0A1Q6PTU8	986.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0101691_53	718252.FP2_00920	993.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0101691_53	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0101691_53	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0101691_53	COG0710	N/A	N/A	3-dehydroquinate dehydratase	N/A
structural_annotation	UHGV-0101691_53	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0101691_54	K03427	48.0	0.00000000000017	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0101691_54	phrog_5696	336.1	0	N/A	unknown function
UniRef90	UHGV-0101691_54	UniRef90_A0A1Q6PTX9	589.0	0	N6_Mtase domain-containing protein	N/A
eggNOG-mapper	UHGV-0101691_54	718252.FP2_00930	591.0	0	N-6 DNA Methylase	N/A
Pfam	UHGV-0101691_54	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0101691_54	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0101691_54	PF05185,TIGR00497,COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_55	phrog_36563	242.7	0	N/A	unknown function
UniRef90	UHGV-0101691_55	UniRef90_A0A3D1WJW6	106.0	1.19e-24	Ftsk_gamma domain-containing protein	N/A
eggNOG-mapper	UHGV-0101691_55	718252.FP2_00940	215.0	0	N/A	N/A
PHROG	UHGV-0101691_56	phrog_1770	82.3	7.4e-24	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0101691_56	536233.CLO_1822	138.0	2.76e-39	N/A	N/A
structural_annotation	UHGV-0101691_56	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
PHROG	UHGV-0101691_57	phrog_7566	99.4	1.8e-29	N/A	unknown function
eggNOG-mapper	UHGV-0101691_57	693746.OBV_25470	84.3	1.05e-19	N/A	N/A
PHROG	UHGV-0101691_58	phrog_24484	110.7	9.3e-33	N/A	unknown function
PHROG	UHGV-0101691_59	phrog_25245	255.4	0	N/A	unknown function
UniRef90	UHGV-0101691_59	UniRef90_A0A3A6E9N3	275.0	0	3D domain-containing protein	N/A
eggNOG-mapper	UHGV-0101691_59	718252.FP2_00980	263.0	0	3D domain	N/A
Pfam	UHGV-0101691_59	PF06725	N/A	N/A	3D domain	3D
COG	UHGV-0101691_59	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0101691_59	PF06725,NF040677,COG3584	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0101691	Yes	45,455	56	84	1