vOTU vOTU-099888

vOTU: vOTU-099888

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-099888
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00095 → vGENUS-02107 → vOTU-099888
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas → Copromonas sp900066535
Host range breadth	Species
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0116184
Biosample ID	SAMEA3888909
Genome length (bp)	24,490 bps
CheckV completeness	62.68% (Medium-quality)
CDS count	31
CDS density	91.96%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas → Copromonas sp900066535	Total connections	26	Host agreement	73.08
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 62.68)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0116184_3	K06909	51.5	0.000000000000017	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0116184_3	phrog_10250	54.2	0.0000000000000015	N/A	unknown function
UniRef90	UHGV-0116184_3	UniRef90_A0A3R6QNE9	442.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0116184_3	1298920.KI911353_gene4856	387.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-0116184_3	COG1783	N/A	N/A	Phage terminase large subunit	N/A
PHROG	UHGV-0116184_4	phrog_533	290.0	0	portal protein	head and packaging
UniRef90	UHGV-0116184_4	UniRef90_A0A174WUZ7	776.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0116184_4	742740.HMPREF9474_03501	748.0	0	N/A	N/A
structural_annotation	UHGV-0116184_4	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_5	phrog_25639	122.2	1.2e-36	N/A	unknown function
eggNOG-mapper	UHGV-0116184_5	742740.HMPREF9474_03502	100.0	8.07e-27	N/A	N/A
PHROG	UHGV-0116184_6	phrog_581	226.1	0	minor head protein	head and packaging
UniRef90	UHGV-0116184_6	UniRef90_UPI0009303339	729.0	0	putative zinc-binding metallopeptidase	N/A
eggNOG-mapper	UHGV-0116184_6	742740.HMPREF9474_03503	470.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0116184_6	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0116184_6	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0116184_6	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_7	phrog_15041	79.0	3.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0116184_7	478749.BRYFOR_07608	55.1	0.00000000445	N/A	N/A
structural_annotation	UHGV-0116184_7	PF10827	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_8	phrog_2303	154.3	1.4013e-45	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-0116184_8	483218.BACPEC_01156	212.0	0	N/A	N/A
PHROG	UHGV-0116184_9	phrog_422	342.6	0	major head protein	head and packaging
UniRef90	UHGV-0116184_9	UniRef90_A0A3R6PT58	521.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0116184_9	33035.JPJF01000093_gene2252	494.0	0	N/A	N/A
structural_annotation	UHGV-0116184_9	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_10	phrog_1378	73.0	3.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-0116184_10	1280692.AUJL01000027_gene2159	75.1	1.02e-16	N/A	N/A
PHROG	UHGV-0116184_11	phrog_541	89.8	2.6e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0116184_11	1304866.K413DRAFT_0783	202.0	0	N/A	N/A
PHROG	UHGV-0116184_12	phrog_8710	136.8	6.29996e-41	N/A	unknown function
eggNOG-mapper	UHGV-0116184_12	742740.HMPREF9474_03508	190.0	0	N/A	N/A
structural_annotation	UHGV-0116184_12	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_13	phrog_556	62.4	7.2e-18	minor head protein	head and packaging
eggNOG-mapper	UHGV-0116184_13	742740.HMPREF9474_03509	185.0	0	N/A	N/A
PHROG	UHGV-0116184_14	phrog_2595	83.2	2.9e-24	head-tail connector protein	connector
UniRef90	UHGV-0116184_14	UniRef90_UPI001D068DAC	182.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0116184_14	483218.BACPEC_01150	179.0	0	N/A	N/A
Pfam	UHGV-0116184_14	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-0116184_14	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_15	phrog_820	128.3	3.8e-38	major tail protein	tail
eggNOG-mapper	UHGV-0116184_15	742740.HMPREF9474_03511	248.0	0	domain, Protein	N/A
COG	UHGV-0116184_15	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0116184_15	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_16	phrog_8300	81.6	8.7e-24	N/A	unknown function
eggNOG-mapper	UHGV-0116184_16	742740.HMPREF9474_03512	108.0	2.02e-29	N/A	N/A
structural_annotation	UHGV-0116184_16	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_17	phrog_1535	479.0	0	tail length tape measure protein	tail
UniRef90	UHGV-0116184_17	UniRef90_A0A174SV65	720.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-0116184_17	742740.HMPREF9474_03514	639.0	0	tape measure	N/A
COG	UHGV-0116184_17	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0116184_17	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_18	phrog_1194	66.4	4.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-0116184_18	1304866.K413DRAFT_0775	232.0	0	N/A	N/A
structural_annotation	UHGV-0116184_18	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_19	phrog_13879	434.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0116184_19	742740.HMPREF9474_03516	998.0	0	N/A	N/A
structural_annotation	UHGV-0116184_19	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_20	phrog_18725	108.6	5.6e-32	N/A	unknown function
eggNOG-mapper	UHGV-0116184_20	742740.HMPREF9474_03517	195.0	0	N/A	N/A
eggNOG-mapper	UHGV-0116184_21	411902.CLOBOL_00122	107.0	1.24e-27	N/A	N/A
COG	UHGV-0116184_23	COG3266	N/A	N/A	Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain	N/A
eggNOG-mapper	UHGV-0116184_25	742740.HMPREF9474_04291	107.0	5.15e-28	N/A	N/A
NCBIFam	UHGV-0116184_26	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-0116184_26	NF040910	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_27	phrog_19111	52.4	9.2e-22	N/A	unknown function
UniRef90	UHGV-0116184_27	UniRef90_UPI0011582918	558.0	0	fibronectin type III domain-containing protein	N/A
eggNOG-mapper	UHGV-0116184_27	1298920.KI911353_gene4836	117.0	4.06e-26	ATPase involved in DNA repair	N/A
Pfam	UHGV-0116184_27	PF00041	N/A	N/A	Fibronectin type III domain	fn3
COG	UHGV-0116184_27	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-0116184_28	phrog_199	56.5	3.6e-16	holin	lysis
UniRef90	UHGV-0116184_28	UniRef90_UPI00115C1583	304.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-0116184_28	411460.RUMTOR_02100	163.0	0	N/A	N/A
Pfam	UHGV-0116184_28	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0116184_28	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-0116184_28	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_29	phrog_355	56.9	3.4e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0116184_29	UniRef90_A0A417BWH3	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-0116184_29	97138.C820_00250	120.0	6.19e-34	N/A	N/A
Pfam	UHGV-0116184_29	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0116184_29	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0116184_30	phrog_918	131.9	1.4e-39	N/A	unknown function
UniRef90	UHGV-0116184_30	UniRef90_UPI00115A7D93	171.0	0	N/A	N/A
eggNOG-mapper	UHGV-0116184_30	1140001.I571_01827	140.0	1.0804e-42	N/A	N/A
Pfam	UHGV-0116184_30	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0116184_30	PF19791	N/A	N/A	N/A	N/A
KOfam	UHGV-0116184_31	K17733	158.9	0	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0116184_31	phrog_2649	138.4	6.20005e-41	endolysin	lysis
UniRef90	UHGV-0116184_31	UniRef90_D7GNX4	509.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
eggNOG-mapper	UHGV-0116184_31	742733.HMPREF9469_01368	364.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0116184_31	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0116184_31	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0116184_31	PF02557,PF19127,MF_01924,NF007557,TIGR04035,COG2173	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0116184	Yes	24,490	47	63	1