vOTU vOTU-100121

vOTU: vOTU-100121

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-100121
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00449 → vGENUS-00510 → vOTU-100121
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Acetatifactor
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0106924
Biosample ID	SAMEA3708790
Genome length (bp)	28,763 bps
CheckV completeness	70.62% (Medium-quality)
CDS count	44
CDS density	91.37%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Acetatifactor	Total connections	437	Host agreement	86.73
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	9	Host agreement	66.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 70.62)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0106924_6	UniRef90_A0A3D5M0V6	105.0	5.39e-29	RHH_1 domain-containing protein	N/A
Pfam	UHGV-0106924_6	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0106924_6	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0106924_9	K03497	54.5	0.0000000000000027	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0106924_9	phrog_940	345.0	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0106924_9	UniRef90_UPI00190E9E57	415.0	0	N/A	N/A
eggNOG-mapper	UHGV-0106924_9	1232449.BAHV02000018_gene1534	367.0	0	N/A	N/A
PADLOC	UHGV-0106924_9	MTase_II_00015	94.5	1.7e-27	Type II methyltransferase	RM
Pfam	UHGV-0106924_9	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0106924_9	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-0106924_9	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0106924_9	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_10	phrog_2579	51.3	0.000000000000018	ParB C-terminal domain	DNA, RNA and nucleotide metabolism
KOfam	UHGV-0106924_12	K06909	420.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0106924_12	phrog_3717	177.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0106924_12	UniRef90_UPI00156D9D24	591.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0106924_12	33035.JPJF01000106_gene3136	583.0	0	Terminase small subunit	N/A
Pfam	UHGV-0106924_12	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0106924_12	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0106924_12	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0106924_12	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0106924_12	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_13	phrog_533	291.7	0	portal protein	head and packaging
UniRef90	UHGV-0106924_13	UniRef90_A0A1C5MB20	528.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0106924_13	33035.JPJF01000106_gene3135	460.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0106924_13	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_14	phrog_556	61.7	9.6e-18	minor head protein	head and packaging
eggNOG-mapper	UHGV-0106924_14	1235790.C805_00048	102.0	2.85e-25	N/A	N/A
Pfam	UHGV-0106924_14	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0106924_14	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_15	phrog_581	216.4	0	minor head protein	head and packaging
UniRef90	UHGV-0106924_15	UniRef90_A0A355KVT5	147.0	2.37e-36	Phage capsid protein (Fragment)	N/A
eggNOG-mapper	UHGV-0106924_15	1235790.C805_00050	228.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0106924_15	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0106924_15	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0106924_15	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_16	phrog_3754	94.0	5.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0106924_16	476272.RUMHYD_01764	130.0	1.05e-37	N/A	N/A
UniRef90	UHGV-0106924_17	UniRef90_A0A395X7A4	102.0	1.61e-26	CTP synthase	N/A
eggNOG-mapper	UHGV-0106924_17	476272.RUMHYD_01766	96.7	7.1e-25	N/A	N/A
PHROG	UHGV-0106924_18	phrog_21718	99.1	3.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-0106924_18	397290.C810_05210	95.5	8.23e-23	N/A	N/A
PHROG	UHGV-0106924_19	phrog_22984	70.0	3.4e-20	N/A	unknown function
PHROG	UHGV-0106924_20	phrog_16490	98.1	6.8e-30	N/A	unknown function
eggNOG-mapper	UHGV-0106924_20	476272.RUMHYD_01770	139.0	7.94e-38	N/A	N/A
PHROG	UHGV-0106924_22	phrog_28802	96.0	1.7e-30	N/A	unknown function
eggNOG-mapper	UHGV-0106924_22	476272.RUMHYD_01772	102.0	3.1e-25	N/A	N/A
PHROG	UHGV-0106924_23	phrog_194	81.7	1.2e-23	head scaffolding protein	head and packaging
UniRef90	UHGV-0106924_23	UniRef90_UPI001D14C9C8	132.0	4.72e-35	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0106924_23	411460.RUMTOR_02088	105.0	9.06e-26	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0106924_23	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0106924_23	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_24	phrog_544	151.7	4.2039e-45	major head protein	head and packaging
UniRef90	UHGV-0106924_24	UniRef90_A0A810PZM2	312.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0106924_24	476272.RUMHYD_02854	194.0	0	N/A	N/A
structural_annotation	UHGV-0106924_24	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_25	phrog_541	87.4	1.3e-25	head-tail adaptor	connector
eggNOG-mapper	UHGV-0106924_25	397290.C810_05226	110.0	1.83e-28	N/A	N/A
PHROG	UHGV-0106924_26	phrog_18218	135.6	1.50001e-40	N/A	unknown function
UniRef90	UHGV-0106924_26	UniRef90_A0A3D0FFR6	139.0	1.12e-40	Ribonuclease	N/A
eggNOG-mapper	UHGV-0106924_26	411902.CLOBOL_03424	84.7	6.49e-20	N/A	N/A
structural_annotation	UHGV-0106924_26	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_27	phrog_3366	98.8	5.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-0106924_27	476272.RUMHYD_01779	139.0	5.03e-40	N/A	N/A
structural_annotation	UHGV-0106924_27	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_28	phrog_3266	77.1	1.9e-22	tail completion	connector
eggNOG-mapper	UHGV-0106924_28	476272.RUMHYD_01781	169.0	0	N/A	N/A
structural_annotation	UHGV-0106924_28	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_29	phrog_3099	135.2	4.1e-40	N/A	unknown function
UniRef90	UHGV-0106924_29	UniRef90_A0A7M3SAI1	113.0	7.8e-28	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0106924_29	1160721.RBI_II00532	136.0	1.37e-38	N/A	N/A
structural_annotation	UHGV-0106924_29	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_30	phrog_11299	117.9	7.5e-35	N/A	unknown function
eggNOG-mapper	UHGV-0106924_30	411459.RUMOBE_01382	103.0	1.19e-26	N/A	N/A
structural_annotation	UHGV-0106924_30	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_31	phrog_706	119.0	3.4e-35	N/A	unknown function
UniRef90	UHGV-0106924_31	UniRef90_A0A173TZF2	188.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0106924_31	411459.RUMOBE_01383	175.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0106924_31	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0106924_31	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_32	phrog_1535	140.3	0	tail length tape measure protein	tail
UniRef90	UHGV-0106924_32	UniRef90_UPI001D0BCA54	88.6	0.0000000000000201	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0106924_32	1280692.AUJL01000027_gene2150	115.0	1.96e-23	phage tail tape measure protein	N/A
COG	UHGV-0106924_32	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_33	phrog_1194	54.2	0.0000000000000025	N/A	unknown function
eggNOG-mapper	UHGV-0106924_33	397290.C810_05238	52.0	0.00000145	N/A	N/A
Pfam	UHGV-0106924_33	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0106924_33	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_34	phrog_18190	601.3	0	N/A	unknown function
UniRef90	UHGV-0106924_34	UniRef90_UPI001D0767E1	620.0	0	gp58-like family protein	N/A
eggNOG-mapper	UHGV-0106924_34	1235790.C805_00089	343.0	0	N/A	N/A
structural_annotation	UHGV-0106924_34	PF05113,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_36	phrog_17196	104.5	8.5e-31	kinase	other
eggNOG-mapper	UHGV-0106924_36	1235790.C805_00090	135.0	2.91e-33	N/A	N/A
structural_annotation	UHGV-0106924_36	PF13619	N/A	N/A	N/A	N/A
KOfam	UHGV-0106924_37	K21471	42.4	0.000000000013	cwlO; peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]	N/A
PHROG	UHGV-0106924_37	phrog_2649	45.9	0.00000000000081	endolysin	lysis
UniRef90	UHGV-0106924_37	UniRef90_R6C8U0	284.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0106924_37	742735.HMPREF9467_02997	117.0	5.33e-28	COG COG0791 Cell wall-associated hydrolases (invasion-associated proteins)	N/A
Pfam	UHGV-0106924_37	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0106924_37	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0106924_37	COG3409	N/A	N/A	N/A	N/A
KOfam	UHGV-0106924_38	K06400	230.5	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0106924_38	phrog_95	235.2	0	integrase	integration and excision
UniRef90	UHGV-0106924_38	UniRef90_A0A1Q6KI87	312.0	0	Resolvase/invertase-type recombinase catalytic domain-containing protein	N/A
eggNOG-mapper	UHGV-0106924_38	411470.RUMGNA_02175	183.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0106924_38	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0106924_38	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0106924_38	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0106924_38	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0106924_38	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_39	phrog_8545	57.7	2e-16	superinfection exclusion Sie-like	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0106924_39	UniRef90_UPI001C0EAFDF	144.0	2.76e-40	OB-fold putative lipoprotein	N/A
eggNOG-mapper	UHGV-0106924_39	1304866.K413DRAFT_0836	141.0	7.05e-40	tRNA_anti-like	N/A
Pfam	UHGV-0106924_39	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
structural_annotation	UHGV-0106924_39	PF12869,PF10571,MF_01959,TIGR03943,COG5235	N/A	N/A	N/A	N/A
PHROG	UHGV-0106924_40	phrog_8	48.4	0.0000000000002	transcriptional regulator	transcription regulation
UniRef90	UHGV-0106924_40	UniRef90_A0A7G9GB40	75.1	0.0000000000000041	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0106924_40	642492.Clole_1825	73.2	0.0000000000000046	sequence-specific DNA binding	N/A
COG	UHGV-0106924_40	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0106924_40	PF12844,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0106924_41	UniRef90_R6RDX0	52.8	0.000000155	Arginyl-tRNA synthetase	N/A
PHROG	UHGV-0106924_44	phrog_4433	183.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0106924_44	665950.HMPREF1025_01373	170.0	0	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0106924_44	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0106924	Yes	28,763	42	71	1