vOTU vOTU-100483

vOTU: vOTU-100483

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-100483
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 → vSUBFAM-02348 → vGENUS-02800 → vOTU-100483
Host lineage
Host range breadth
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0120345
Biosample ID	SAMEA103958140
Genome length (bp)	20,052 bps
CheckV completeness	57.13% (Medium-quality)
CDS count	26
CDS density	97.94%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method
CRISPR-predicted host lineage	Total connections	Host agreement
PHIST-predicted host lineage	Total connections	Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 57.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0120345_1	phrog_4973	46.1	0.00000000000081	N/A	unknown function
Pfam	UHGV-0120345_1	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0120345_1	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0120345_2	phrog_398	201.7	0	N/A	unknown function
UniRef90	UHGV-0120345_2	UniRef90_UPI00137B6F1E	216.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0120345_2	1485543.JMME01000021_gene802	207.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0120345_2	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0120345_2	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0120345_3	phrog_4897	113.0	4.1e-33	kinase	other
UniRef90	UHGV-0120345_3	UniRef90_A0A418MBD6	104.0	7.09e-28	N/A	N/A
eggNOG-mapper	UHGV-0120345_3	560178.B6D7L1_9CAUD	79.7	3.84e-17	N/A	N/A
Pfam	UHGV-0120345_3	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0120345_3	PF11753	N/A	N/A	N/A	N/A
KOfam	UHGV-0120345_5	K03111	131.4	1.1e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0120345_5	phrog_44	133.0	2.2e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0120345_5	UniRef90_A0A2V2ET02	135.0	1.94e-38	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0120345_5	1042163.BRLA_c031440	112.0	3.5e-30	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0120345_5	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0120345_5	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0120345_5	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0120345_5	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0120345_5	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0120345_11	phrog_774	42.8	0.000000000011	N/A	unknown function
structural_annotation	UHGV-0120345_11	PF10458	N/A	N/A	N/A	N/A
Pfam	UHGV-0120345_12	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
structural_annotation	UHGV-0120345_12	PF02796,NF040785	N/A	N/A	N/A	N/A
KOfam	UHGV-0120345_13	K06909	125.3	7.1e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0120345_13	phrog_2	69.1	9.6e-20	terminase large subunit	head and packaging
UniRef90	UHGV-0120345_13	UniRef90_A0A2Z4GUK2	311.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0120345_13	66692.ABC2839	70.1	0.00000000041	Terminase RNAseH like domain	N/A
Pfam	UHGV-0120345_13	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0120345_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0120345_13	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0120345_14	phrog_533	114.7	6.3e-34	portal protein	head and packaging
UniRef90	UHGV-0120345_14	UniRef90_A0A2Z4GUT7	591.0	0	Portal protein	N/A
structural_annotation	UHGV-0120345_14	PF05133,MF_04120,TIGR01542,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0120345_15	phrog_581	89.7	4.7e-26	minor head protein	head and packaging
UniRef90	UHGV-0120345_15	UniRef90_A0A2Z4GUI4	239.0	0	Minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0120345_15	997296.PB1_16234	63.2	0.000000039	Phage minor capsid protein 2	N/A
Pfam	UHGV-0120345_15	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0120345_15	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0120345_15	PF06152,TIGR01641	N/A	N/A	N/A	N/A
UniRef90	UHGV-0120345_17	UniRef90_A0A2Z4GUC0	600.0	0	Chitobiase/beta-hexosaminidase	N/A
eggNOG-mapper	UHGV-0120345_17	1408324.JNJK01000056_gene3661	71.2	0.000000000496	Pilus formation protein N terminal region	N/A
Pfam	UHGV-0120345_17	PF13290	N/A	N/A	Chitobiase/beta-hexosaminidase C-terminal domain	CHB_HEX_C_1
COG	UHGV-0120345_17	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-0120345_17	PF05065,PF13620,MF_04119,TIGR04387,TIGR04134,COG4653	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0120345_19	PF07405,TIGR01563	N/A	N/A	N/A	N/A
UniRef90	UHGV-0120345_20	UniRef90_A0A2Z4GU91	97.8	2.18e-24	Minor capsid protein	N/A
structural_annotation	UHGV-0120345_23	PF09097,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0120345_24	phrog_5302	212.2	0	tail protein	tail
eggNOG-mapper	UHGV-0120345_24	445970.ALIPUT_02628	109.0	2.71e-22	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0120345	Yes	20,052	41	57	1